Factsheet for Zm00001d017025_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

peroxisome 1
plastid 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, peroxisome, plastid
MultiLoc:	peroxisome
PProwler:	plastid
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d017475_P002

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G77760.1	Zm00001d017475_P002	AT3G48150.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU85223	Sorghum	cytosol	88.31	85.16
Zm00001d031769_P001	Maize	mitochondrion	57.3	74.13
Zm00001d049995_P001	Maize	cytosol, mitochondrion, peroxisome, plastid	56.18	74.07
Zm00001d052139_P001	Maize	cytosol, mitochondrion, peroxisome	50.0	68.67
GSMUA_Achr8P23160_001	Banana	mitochondrion	52.25	67.98
Zm00001d018206_P001	Maize	peroxisome	50.11	67.58
GSMUA_Achr9P15480_001	Banana	cytosol	55.39	65.65
CDY68886	Canola	cytosol, mitochondrion	52.7	64.51
CDX87505	Canola	cytosol, mitochondrion, peroxisome, plastid	19.78	63.08
VIT_18s0001g03910.t01	Wine grape	plastid	64.04	62.71
KRH18816	Soybean	cytosol, mitochondrion, peroxisome	62.25	62.53
KRH53180	Soybean	cytosol, mitochondrion, peroxisome	62.02	62.02
Solyc11g013810.1.1	Tomato	cytosol, nucleus	62.92	61.4
PGSC0003DMT400077648	Potato	cytosol	62.81	61.36
Bra003670.1-P	Field mustard	plastid	62.36	60.99
CDX79234	Canola	plastid	62.36	60.92
KRH16606	Soybean	cytosol	59.66	60.82
CDX68044	Canola	plastid	62.13	60.77
Bra015656.1-P	Field mustard	cytosol	60.56	60.56
CDX88386	Canola	cytosol, plastid	60.79	60.51
Bra008333.1-P	Field mustard	plastid	61.57	60.49
KRH16605	Soybean	cytosol	59.33	59.59
AT1G37130.1	Thale cress	cytosol	61.35	59.54
AT1G77760.1	Thale cress	cytosol	60.79	59.0
KRH18814	Soybean	cytosol, mitochondrion, plastid	29.78	57.86
CDY26836	Canola	cytosol	35.51	56.73
CDX87504	Canola	cytosol	32.81	56.48
GSMUA_Achr3P07200_001	Banana	cytosol	64.38	50.93
GSMUA_Achr5P05820_001	Banana	mitochondrion, nucleus, peroxisome	22.7	44.2
GSMUA_Achr5P05830_001	Banana	cytosol	15.62	38.83
Zm00001d038529_P003	Maize	plasma membrane	11.91	34.3
Zm00001d039656_P003	Maize	mitochondrion	11.91	34.08
Zm00001d043098_P002	Maize	endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole	11.24	32.68
Zm00001d017490_P001	Maize	mitochondrion	2.58	22.33

Protein Annotations

Gene3D:2.40.30.10	Gene3D:2.60.40.650	MapMan:25.1.4.1	Gene3D:3.10.120.10	Gene3D:3.40.50.80	Gene3D:3.90.420.10
UniProt:A0A1D6HBR0	ProteinID:AQK72138.1	InterPro:Cyt_B5-like_heme/steroid-bd	InterPro:Cyt_B5-like_heme/steroid_sf	InterPro:Cyt_B5_heme-BS	InterPro:Fd_Rdtase_FAD-bd
InterPro:Flavoprot_Pyr_Nucl_cyt_Rdtase	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0006809	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009703	GO:GO:0009987	GO:GO:0016491	GO:GO:0020037
GO:GO:0030151	GO:GO:0042128	GO:GO:0043546	GO:GO:0046872	GO:GO:0050463	GO:GO:0050464
GO:GO:0055114	InterPro:IPR001199	InterPro:IPR017927	InterPro:IPR036374	InterPro:IPR036400	InterPro:Ig_E-set
InterPro:MoCF_OxRdtse_dimer	InterPro:Mopterin_OxRdtase_euk	InterPro:NADH-Cyt_B5_reductase	InterPro:Nitr_rd_NADH	InterPro:OxRdtase_FAD-bd_dom	InterPro:OxRdtase_FAD/NAD-bd
InterPro:OxRdtase_Mopterin-bd_dom	InterPro:OxRdtase_Mopterin-bd_sf	InterPro:OxRdtase_Mopterin_BS	PFAM:PF00173	PFAM:PF00174	PFAM:PF00175
PFAM:PF00970	PFAM:PF03404	PIRSF:PIRSF000233	PRINTS:PR00363	PRINTS:PR00371	PRINTS:PR00406
PRINTS:PR00407	ScanProsite:PS00191	ScanProsite:PS00559	PFscan:PS50255	PFscan:PS51384	PANTHER:PTHR19370
PANTHER:PTHR19370:SF182	InterPro:Riboflavin_synthase-like_b-brl	SMART:SM01117	SUPFAM:SSF52343	SUPFAM:SSF55856	SUPFAM:SSF56524
SUPFAM:SSF63380	SUPFAM:SSF81296	UniParc:UPI000843879C	EnsemblPlantsGene:Zm00001d017025	EnsemblPlants:Zm00001d017025_P001	EnsemblPlants:Zm00001d017025_T001
SEG:seg	:	:	:	:	:

Description

Nitrate reductase [NADH] 2

Coordinates

chr5:-:183002648..183005612

Molecular Weight (calculated)

98645.7 Da

IEP (calculated)

6.709

GRAVY (calculated)

-0.297

Length

890 amino acids

Sequence
(BLAST)

001: MSTCVEQPTH SASLDPTAAQ RLPYPDLPVD ILRRSSVRGS GFVAAALVSS ARKADDDASD DDDDDHQGDR HETYGSHYLR HLGVEPSVRD EGTVDAWVER
101: SPSLIRLTGK HPFNGEPPLP RLMRHGFITP APLHYVRNHG PVPRGDWATW TVEVTGLVRR PARLTMDELA RDFPALELPV TLVCSSNRRK EQNMSRQTLG
201: FNWGPGAVST SVWRGARLRD VLRRCGGVAD GALFVCFEGA EDLPGGGGTK YGTSITRERA LDPTMDVMLA YQQNGGPLLP DHGFPVRLIV PGCTAGRMVK
301: WLKRIVVAPA ESDNYYHYRD NRFLPSHVDA KLADAEGWWY KPEYVINEMN TNSVITTPAH NEFLPINAIT TQRIYTMKGF AYSGGGKKVT RVEVTLDGGE
401: NWLLCALDHP EKPTKYGRYW CWCFWSIDVE LIDLLACKEI AVRAWDQSLN TQPEFLTWNL MGMMTNCWFR VKVNVCRPRM GEKAGLAFEH PVQPGNQPGG
501: WMAQQKHLET AEATSAATST TNQQFTMSEV RKHASQDSAW IVVHGHVYDC TEYLKDHPGG ADSILINAGT DCTEEFDAIH SDKAKELLAP YRIGDLVTTA
601: GAEQASPLEL APSPPIRHEG PAAPVVALSN PREKVPCRLV ARTVLSRDVR LFRFALPSSG QVLGLPVGKH IFVCASIDGK LCVRAYTPTS SVDEVGHFDL
701: LVKVYFRNEN PKFPDGGRMT QYLDSLPVGA SVDVKGPLGH VEYVGRGGFV IDGKPRKAGR LAMVAGGSGI TPIYQVIQAV LRDQPEDKTE MHLVYANRTE
801: DDILLRAELD RWAAEYPDRL KVWYVVSQVK RLDEWKYSVG IVTEAVLREH VPEGGDGTLA LVCGPPLMIQ LAILPNLEKM KHHVDSVIVF

Best Arabidopsis Sequence Match ( AT1G77760.1 )
(BLAST)

001: MATSVDNRHY PTMNGVAHAF KPPLVPSPRS FDRHRHQNQT LDVILTETKI VKETEVITTV VDSYDDSSSD DEDESHNRNV PYYKELVKKS NSDLEPSILD
101: PRDESTADSW IQRNSSMLRL TGKHPFNAEA PLPRLMHHGF ITPVPLHYVR NHGAVPKANW SDWSIEITGL VKRPAKFTME ELISEFPSRE FPVTLVCAGN
201: RRKEQNMVKQ TIGFNWGSAG VSTSLWKGIP LSEILRRCGI YSRRGGALNV CFEGAEDLPG GGGSKYGTSI KKEMAMDPAR DIILAYMQNG ELLTPDHGFP
301: VRVIVPGFIG GRMVKWLKRI IVTPQESDSY YHYKDNRVLP SLVDAELANS EAWWYKPEYI INELNINSVI TTPGHAEILP INAFTTQKPY TLKGYAYSGG
401: GKKVTRVEVT LDGGDTWSVC ELDHQEKPNK YGKFWCWCFW SLDVEVLDLL SAKDVAVRAW DESFNTQPDK LIWNLMGMMN NCWFRIRTNV CKPHRGEIGI
501: VFEHPTRPGN QSGGWMAKER QLEISSESNN TLKKSVSSPF MNTASKMYSI SEVRKHNTAD SAWIIVHGHI YDCTRFLKDH PGGTDSILIN AGTDCTEEFE
601: AIHSDKAKKL LEDYRIGELI TTGYDSSPNV SVHGASNFGP LLAPIKELTP QKNIALVNPR EKIPVRLIEK TSISHDVRKF RFALPSEDQQ LGLPVGKHVF
701: VCANINDKLC LRAYTPTSAI DAVGHIDLVV KVYFKDVHPR FPNGGLMSQH LDSLPIGSMI DIKGPLGHIE YKGKGNFLVS GKPKFAKKLA MLAGGTGITP
801: IYQIIQSILS DPEDETEMYV VYANRTEDDI LVREELEGWA SKHKERLKIW YVVEIAKEGW SYSTGFITEA VLREHIPEGL EGESLALACG PPPMIQFALQ
901: PNLEKMGYNV KEDLLIF

Arabidopsis Description

NIA1Nitrate reductase [Source:UniProtKB/TrEMBL;Acc:A0A178WBR8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.