Factsheet for Zm00001d043098_P002

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, extracellular, endoplasmic reticulum, vacuole, mitochondrion, plastid, plasma membrane, golgi

Predictor Summary:

extracellular 3
endoplasmic reticulum 3
vacuole 3
plasma membrane 3
golgi 3
peroxisome 1
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion, peroxisome, plastid, secretory
Any Predictor:	mitochondrion, peroxisome, secretory
iPSORT:	secretory
MultiLoc:	peroxisome
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES03792	Sorghum	endoplasmic reticulum	89.54	98.21
Zm00001d017490_P001	Maize	mitochondrion	33.01	98.06
Os01t0814900-01	Rice	plasma membrane	82.68	90.68
TraesCS3A01G338700.1	Wheat	golgi	80.39	88.17
TraesCS3D01G332300.1	Wheat	unclear	80.07	87.81
TraesCS3B01G370400.1	Wheat	endoplasmic reticulum	80.07	87.81
KRG94933	Soybean	mitochondrion	66.99	85.06
HORVU3Hr1G080010.1	Barley	cytosol, peroxisome	21.9	82.72
GSMUA_Achr8P21540_001	Banana	endoplasmic reticulum	74.18	81.95
KRH64963	Soybean	endoplasmic reticulum	73.86	81.3
Zm00001d038529_P003	Maize	plasma membrane	79.08	78.32
VIT_08s0056g01150.t01	Wine grape	endoplasmic reticulum	70.26	77.62
Solyc10g081440.1.1	Tomato	extracellular, plastid	69.93	76.98
PGSC0003DMT400072515	Potato	endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole	69.61	76.62
CDY38457	Canola	endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole	69.93	76.16
Bra006419.1-P	Field mustard	endoplasmic reticulum	69.61	75.53
CDX78759	Canola	endoplasmic reticulum	69.28	75.44
Bra002104.1-P	Field mustard	endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole	68.95	75.09
AT5G17770.1	Thale cress	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, vacuole	68.3	74.38
CDY59316	Canola	endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole	67.97	74.02
CDY02688	Canola	endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole	67.65	73.67
CDX70774	Canola	endoplasmic reticulum	65.03	73.16
Bra023636.1-P	Field mustard	endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole	59.15	72.11
CDY63711	Canola	cytosol	51.31	71.04
Zm00001d039656_P003	Maize	mitochondrion	41.5	40.84
CDY28560	Canola	endoplasmic reticulum	23.86	38.22
CDY16891	Canola	golgi, plasma membrane, vacuole	70.26	27.04
Zm00001d017025_P001	Maize	cytosol	32.68	11.24
Zm00001d031769_P001	Maize	mitochondrion	21.57	9.59
Zm00001d052139_P001	Maize	cytosol, mitochondrion, peroxisome	18.3	8.64
Zm00001d018206_P001	Maize	peroxisome	18.63	8.64
Zm00001d049995_P001	Maize	cytosol, mitochondrion, peroxisome, plastid	17.65	8.0

Protein Annotations

Gene3D:2.40.30.10	Gene3D:3.40.50.80	MapMan:50.1.6	UniProt:A0A1D6N8X4	InterPro:Fd_Rdtase_FAD-bd	GO:GO:0003674
GO:GO:0003824	GO:GO:0005575	GO:GO:0008150	GO:GO:0008152	GO:GO:0016020	GO:GO:0016021
GO:GO:0016491	GO:GO:0055114	InterPro:IPR017927	InterPro:NADH-Cyt_B5_reductase	ProteinID:ONM36999.1	InterPro:OxRdtase_FAD-bd_dom
InterPro:OxRdtase_FAD/NAD-bd	PFAM:PF00175	PFAM:PF00970	PRINTS:PR00406	PFscan:PS51384	PANTHER:PTHR19370
PANTHER:PTHR19370:SF175	InterPro:Riboflavin_synthase-like_b-brl	SUPFAM:SSF52343	SUPFAM:SSF63380	TMHMM:TMhelix	UniParc:UPI000844095B
EnsemblPlantsGene:Zm00001d043098	EnsemblPlants:Zm00001d043098_P002	EnsemblPlants:Zm00001d043098_T002	SEG:seg	:	:

Description

ferric-chelate reductase (NADH)1Cytochrome b5 reductase

Coordinates

chr3:+:189164370..189168123

Molecular Weight (calculated)

34473.9 Da

IEP (calculated)

8.737

GRAVY (calculated)

-0.191

Length

306 amino acids

Sequence
(BLAST)

001: MDFLQEQSVE TTVAVAVAVA AVAAGGAFLL LRSRKPKGCL DPENFRKFKL VEKKQISHNV ARFKFALPTP TSVLGLPIGQ HISCRGQDAT GEEVIKPYTP
101: TTLDSDLGYF ELVIKMYPQG RMSHHFREMK VGDYLSVKGP KGRFKYHVGQ VRAFGMLAGG SGITPMFQVA RAILENPNDN TKVHLIYANV TYEDILLKDE
201: LDDMAKTYPG RFKIYYVLNQ VCVTFFRKFE AHCFQRHPTY TVFLLVQPPE NWNGGVGFVS KEMIQSHCPA PAEDIQILRC GPPPMNKAMA AHLDELNYTK
301: EMQFQF

Best Arabidopsis Sequence Match ( AT5G17770.1 )
(BLAST)

001: MDTEFLRTLD RQILLGVFVA FVAVGAGAAY FLTSSKKRRV CLDPENFKEF KLVKRHQLSH NVAKFVFELP TSTSVLGLPI GQHISCRGKD GQGEDVIKPY
101: TPTTLDSDVG RFELVIKMYP QGRMSHHFRE MRVGDHLAVK GPKGRFKYQP GQFRAFGMLA GGSGITPMFQ VARAILENPT DKTKVHLIYA NVTYDDILLK
201: EELEGLTTNY PEQFKIFYVL NQPPEVWDGG VGFVSKEMIQ THCPAPASDI QILRCGPPPM NKAMAANLEA LGYSPEMQFQ F

Arabidopsis Description

CBR1NADH-cytochrome b5 reductase [Source:UniProtKB/TrEMBL;Acc:A0A178US77]
SUBAcon: [peroxisome,extracellular,endoplasmic reticulum,vacuole,mitochondrion,cytosol,plasma membrane,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.