Factsheet for Bra023636.1-P

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, extracellular, endoplasmic reticulum, vacuole, mitochondrion, plastid, plasma membrane, golgi

Predictor Summary:

cytosol 1
extracellular 3
endoplasmic reticulum 3
vacuole 3
plasma membrane 3
golgi 3
peroxisome 1
mitochondrion 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion, peroxisome, plastid, secretory
Any Predictor:	cytosol, mitochondrion, peroxisome, plastid, secretory
BaCelLo:	cytosol
iPSORT:	secretory
MultiLoc:	peroxisome
Plant-mPloc:	mitochondrion
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY59316	Canola	endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole	98.8	88.26
CDY02688	Canola	endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole	98.01	87.54
Bra002104.1-P	Field mustard	endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole	94.82	84.7
AT5G17770.1	Thale cress	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, vacuole	91.24	81.49
Bra006419.1-P	Field mustard	endoplasmic reticulum	90.84	80.85
KRG94933	Soybean	mitochondrion	71.71	74.69
KRH64963	Soybean	endoplasmic reticulum	79.28	71.58
PGSC0003DMT400072515	Potato	endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole	77.69	70.14
Solyc10g081440.1.1	Tomato	extracellular, plastid	77.29	69.78
VIT_08s0056g01150.t01	Wine grape	endoplasmic reticulum	76.1	68.95
TraesCS1A01G305700.1	Wheat	golgi	76.1	68.46
TraesCS1D01G305400.1	Wheat	endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole	75.7	68.1
TraesCS1B01G316400.1	Wheat	unclear	75.7	68.1
EES18413	Sorghum	plastid	75.7	68.1
GSMUA_Achr8P21540_001	Banana	endoplasmic reticulum	74.5	67.51
Os05t0488900-01	Rice	endoplasmic reticulum	75.7	67.38
TraesCS3A01G338700.1	Wheat	golgi	74.1	66.67
TraesCS3B01G370400.1	Wheat	endoplasmic reticulum	74.1	66.67
TraesCS3D01G332300.1	Wheat	unclear	74.1	66.67
EES03792	Sorghum	endoplasmic reticulum	73.31	65.95
Os01t0814900-01	Rice	plasma membrane	72.91	65.59
Zm00001d038529_P003	Maize	plasma membrane	75.3	61.16
Zm00001d043098_P002	Maize	endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole	72.11	59.15
Zm00001d017490_P001	Maize	mitochondrion	22.31	54.37
HORVU3Hr1G079960.7	Barley	endoplasmic reticulum	47.01	53.39
Bra015656.1-P	Field mustard	cytosol	35.46	10.0
Bra003670.1-P	Field mustard	plastid	34.66	9.56
Bra008333.1-P	Field mustard	plastid	34.26	9.49

Protein Annotations

Gene3D:2.40.30.10	Gene3D:3.40.50.80	MapMan:35.1	EnsemblPlantsGene:Bra023636	EnsemblPlants:Bra023636.1	EnsemblPlants:Bra023636.1-P
InterPro:Fd_Rdtase_FAD-bd	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0008150	GO:GO:0008152
GO:GO:0016020	GO:GO:0016021	GO:GO:0016491	GO:GO:0055114	InterPro:IPR017927	UniProt:M4E4D3
InterPro:NADH-Cyt_B5_reductase	InterPro:OxRdtase_FAD-bd_dom	InterPro:OxRdtase_FAD/NAD-bd	PFAM:PF00175	PFAM:PF00970	PRINTS:PR00406
PFscan:PS51384	PANTHER:PTHR19370	PANTHER:PTHR19370:SF175	InterPro:Riboflavin_synthase-like_b-brl	SUPFAM:SSF52343	SUPFAM:SSF63380
TMHMM:TMhelix	UniParc:UPI0002543139	SEG:seg	:	:	:

Description

AT5G17770 (E=2e-078) ATCBR, CBR1 | ATCBR (ARABIDOPSIS THALIANA NADH:CYTOCHROME B5 REDUCTASE 1); cytochrome-b5 reductase

Coordinates

chrA02:-:4304628..4306629

Molecular Weight (calculated)

27893.6 Da

IEP (calculated)

8.307

GRAVY (calculated)

-0.274

Length

251 amino acids

Sequence
(BLAST)

001: MDTDFLRTLD RQILLGVFVA FVAASAGAAY YLSSSKKRRG CLDPENFKEF KLVKKEQLSH NVAKFVFELP SSTAVLGLPI GQHISCRGKD AQGEDVIKPY
101: TPTTLDSDLG RFELVIKMYP QGRMSHHFRE MRVGDHLAVK GPKGRFKYQP GQFRAFGMLA GGSGITPLFQ EELESLTANY PDQFKIYYVL NQPPETWDGG
201: VGFVSKDMIQ AHCPAPASDS QVLRCGPPPM NKAMAANLEA LGYSPEMQFQ F

Best Arabidopsis Sequence Match ( AT5G17770.1 )
(BLAST)

001: MDTEFLRTLD RQILLGVFVA FVAVGAGAAY FLTSSKKRRV CLDPENFKEF KLVKRHQLSH NVAKFVFELP TSTSVLGLPI GQHISCRGKD GQGEDVIKPY
101: TPTTLDSDVG RFELVIKMYP QGRMSHHFRE MRVGDHLAVK GPKGRFKYQP GQFRAFGMLA GGSGITPMFQ VARAILENPT DKTKVHLIYA NVTYDDILLK
201: EELEGLTTNY PEQFKIFYVL NQPPEVWDGG VGFVSKEMIQ THCPAPASDI QILRCGPPPM NKAMAANLEA LGYSPEMQFQ F

Arabidopsis Description

CBR1NADH-cytochrome b5 reductase [Source:UniProtKB/TrEMBL;Acc:A0A178US77]
SUBAcon: [peroxisome,extracellular,endoplasmic reticulum,vacuole,mitochondrion,cytosol,plasma membrane,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.