Factsheet for Os05t0488900-01

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

cytosol 1
mitochondrion 2
extracellular 4
endoplasmic reticulum 5
vacuole 4
plasma membrane 4
golgi 4
peroxisome 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	cytosol, mitochondrion, peroxisome, plastid, secretory
BaCelLo:	cytosol
EpiLoc:	mitochondrion
iPSORT:	secretory
MultiLoc:	peroxisome
Plant-mPloc:	mitochondrion
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1B01G316400.1	Wheat	unclear	89.36	90.32
HORVU1Hr1G068870.1	Barley	endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole	89.01	89.96
TraesCS1D01G305400.1	Wheat	endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole	88.65	89.61
TraesCS1A01G305700.1	Wheat	golgi	88.65	89.61
HORVU0Hr1G031690.1	Barley	mitochondrion, nucleus, peroxisome	51.77	89.02
EES18413	Sorghum	plastid	86.88	87.81
Os01t0814900-01	Rice	plasma membrane	84.75	85.66
KRG94933	Soybean	mitochondrion	72.69	85.06
KRH64963	Soybean	endoplasmic reticulum	81.21	82.37
GSMUA_Achr8P21540_001	Banana	endoplasmic reticulum	80.5	81.95
CDY38457	Canola	endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole	79.08	79.36
Bra006419.1-P	Field mustard	endoplasmic reticulum	78.72	78.72
CDX78759	Canola	endoplasmic reticulum	78.37	78.65
Zm00001d038529_P003	Maize	plasma membrane	86.17	78.64
Bra002104.1-P	Field mustard	endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole	78.01	78.29
PGSC0003DMT400072515	Potato	endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole	76.95	78.06
CDY59316	Canola	endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole	77.66	77.94
AT5G17770.1	Thale cress	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, vacuole	77.66	77.94
CDY02688	Canola	endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole	77.31	77.58
Solyc10g081440.1.1	Tomato	extracellular, plastid	76.24	77.34
VIT_08s0056g01150.t01	Wine grape	endoplasmic reticulum	75.89	77.26
CDX70774	Canola	endoplasmic reticulum	74.11	76.84
Bra023636.1-P	Field mustard	endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole	67.38	75.7
CDY63711	Canola	cytosol	57.8	73.76
Os01t0174300-01	Rice	mitochondrion	43.97	39.87
CDY28560	Canola	endoplasmic reticulum	26.24	38.74
CDY16891	Canola	golgi, plasma membrane, vacuole	79.43	28.18
Os08t0468100-01	Rice	plastid	39.36	12.12
Os08t0468700-00	Rice	plastid	39.36	12.12
Os02t0770800-01	Rice	cytosol	35.11	11.14

Protein Annotations

Gene3D:2.40.30.10	Gene3D:3.40.50.80	EntrezGene:4339153	MapMan:50.1.6	ProteinID:AAT77284.1	EMBL:AK071883
EMBL:AK073699	EMBL:AK105459	ProteinID:BAF17802.1	ProteinID:BAS94637.1	InterPro:Fd_Rdtase_FAD-bd	InterPro:Flavoprot_Pyr_Nucl_cyt_Rdtase
GO:GO:0003674	GO:GO:0003824	GO:GO:0004128	GO:GO:0005575	GO:GO:0006091	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016491	GO:GO:0022900
GO:GO:0055114	InterPro:IPR017927	InterPro:NADH-Cyt_B5_reductase	EnsemblPlantsGene:Os05g0488900	EnsemblPlants:Os05t0488900-01	InterPro:OxRdtase_FAD-bd_dom
InterPro:OxRdtase_FAD/NAD-bd	PFAM:PF00175	PFAM:PF00970	PRINTS:PR00371	PRINTS:PR00406	PFscan:PS51384
PANTHER:PTHR19370	PANTHER:PTHR19370:SF175	UniProt:Q6AVN1	InterPro:Riboflavin_synthase-like_b-brl	SUPFAM:SSF52343	SUPFAM:SSF63380
TMHMM:TMhelix	UniParc:UPI00003FE5EA	RefSeq:XP_015637944.1	SEG:seg	:	:

Description

Similar to Cytochrome b5 reductase. (Os05t0488900-01)

Coordinates

chr5:+:24027775..24030803

Molecular Weight (calculated)

31397.2 Da

IEP (calculated)

7.607

GRAVY (calculated)

-0.150

Length

282 amino acids

Sequence
(BLAST)

001: MEFLQGQSTE TAVAVAVAVV AVAAGAAFLL LLLRSSKKPK GCLDPENFKE FKLVEKRQIS HNVAKFRFAL PTPASVLGLP IGQHISCRGQ DATGEEVIKP
101: YTPTTLDSDL GRFELVIKMY PQGRMSHHFH EMKVGDYLSV RGPKGRFKYQ PGQVRAFGML AGGSGITPMF QVTRAILENP SDNTKVHLIY ANVTYDDILL
201: KEELDSMVET YPDRFKIYYV LNQPPEIWNG GVGFVSMEMI QTHCPAPAAD IQILRCGPPP MNKAMAEHLE NLGYTKEMQF QF

Best Arabidopsis Sequence Match ( AT5G17770.1 )
(BLAST)

001: MDTEFLRTLD RQILLGVFVA FVAVGAGAAY FLTSSKKRRV CLDPENFKEF KLVKRHQLSH NVAKFVFELP TSTSVLGLPI GQHISCRGKD GQGEDVIKPY
101: TPTTLDSDVG RFELVIKMYP QGRMSHHFRE MRVGDHLAVK GPKGRFKYQP GQFRAFGMLA GGSGITPMFQ VARAILENPT DKTKVHLIYA NVTYDDILLK
201: EELEGLTTNY PEQFKIFYVL NQPPEVWDGG VGFVSKEMIQ THCPAPASDI QILRCGPPPM NKAMAANLEA LGYSPEMQFQ F

Arabidopsis Description

CBR1NADH-cytochrome b5 reductase [Source:UniProtKB/TrEMBL;Acc:A0A178US77]
SUBAcon: [peroxisome,extracellular,endoplasmic reticulum,vacuole,mitochondrion,cytosol,plasma membrane,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.