Factsheet for Os01t0174300-01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
mitochondrion 8
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	secretory
EpiLoc:	mitochondrion
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Plant-mPloc:	mitochondrion
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

Inferred distinct locusB in Crop

locusB	locations
Os03t0596900-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G20080.1	Os03t0596900-01	AT4G26630.1	25387881

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES00217	Sorghum	mitochondrion	92.6	92.6
Zm00001d039656_P003	Maize	mitochondrion	90.68	90.68
TraesCS3B01G147600.1	Wheat	mitochondrion, unclear	89.39	89.97
HORVU3Hr1G024170.3	Barley	mitochondrion	89.07	89.07
TraesCS3A01G128600.1	Wheat	mitochondrion	88.75	89.03
TraesCS3D01G129500.1	Wheat	mitochondrion	88.42	89.0
GSMUA_Achr10P...	Banana	mitochondrion	78.78	74.02
VIT_11s0016g04970.t01	Wine grape	mitochondrion	73.31	69.94
KRH03716	Soybean	mitochondrion	69.45	67.71
KRH56619	Soybean	mitochondrion	69.77	67.18
AT5G20080.1	Thale cress	mitochondrion	69.45	65.85
Solyc05g018520.2.1	Tomato	plastid	68.17	65.63
Os01t0814900-01	Rice	plasma membrane	39.87	44.44
Os05t0488900-01	Rice	endoplasmic reticulum	39.87	43.97
Os02t0770800-01	Rice	cytosol	36.01	12.6
Os08t0468100-01	Rice	plastid	36.33	12.34
Os08t0468700-00	Rice	plastid	36.33	12.34

Protein Annotations

Gene3D:2.40.30.10	Gene3D:3.40.50.80	EntrezGene:4327126	MapMan:50.1.6	ProteinID:BAD68119.1	ProteinID:BAF04077.1
ProteinID:BAS70654.1	ProteinID:EEE53961.1	InterPro:Fd_Rdtase_FAD-bd	InterPro:Flavoprot_Pyr_Nucl_cyt_Rdtase	GO:GO:0003674	GO:GO:0003824
GO:GO:0004128	GO:GO:0005488	GO:GO:0005507	GO:GO:0005575	GO:GO:0005618	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0005794	GO:GO:0006950	GO:GO:0008150
GO:GO:0008152	GO:GO:0009505	GO:GO:0009628	GO:GO:0009651	GO:GO:0016491	GO:GO:0030312
GO:GO:0055114	InterPro:IPR017927	InterPro:NADH-Cyt_B5_reductase	EnsemblPlantsGene:Os01g0174300	EnsemblPlants:Os01t0174300-01	InterPro:OxRdtase_FAD-bd_dom
InterPro:OxRdtase_FAD/NAD-bd	PFAM:PF00175	PFAM:PF00970	PRINTS:PR00371	PRINTS:PR00406	PFscan:PS51384
PANTHER:PTHR19370	PANTHER:PTHR19370:SF174	UniProt:Q5VR12	InterPro:Riboflavin_synthase-like_b-brl	SUPFAM:SSF52343	SUPFAM:SSF63380
UniParc:UPI0000457D81	RefSeq:XP_015621896.1	SEG:seg	:	:	:

Description

Flavoprotein pyridine nucleotide cytochrome reductase domain containing protein. (Os01t0174300-01);Flavoprotein pyridine nucleotide cytochrome reductase domain containing protein. (Os01t0174300-02)

Coordinates

chr1:-:3820177..3824512

Molecular Weight (calculated)

33854.1 Da

IEP (calculated)

9.172

GRAVY (calculated)

-0.164

Length

311 amino acids

Sequence
(BLAST)

001: MAALLLRRLA GTHRGRVPLA AAAAVTGGAA LFCASSPPTI ALMEEKGEDA AAKVALNPDK WLEFKLQEKA TVSHNSQLFR FSFDPSTKLG LDVASCLITR
101: APIGEEVEGG RKFVIRPYTP ISDPDSKGYF DLLIKVYPDG KMSQYFASLK PGDVVEVKGP IEKLRYSPNM KKQIGMIAGG TGITPMLQVV RAILKNPDDN
201: TQVSLIYANV SPDDILLKRE LDRLASSYPN FKVFYTVDKP SNDWRGGVGY ISKDIALKGL PRPGEDSLIL VCGPPGMMNH ISGDKAKDRS QGELTGILKE
301: LGYTAEMVYK F

Best Arabidopsis Sequence Match ( AT5G20080.1 )
(BLAST)

001: MATSFFRRLA RSAPITFPVA FGSQSKSGSG AFRFSTGAIA ALSGGFSYYY LTSGNNLVYL DQAKEETGPK TALNPDKWLE FKLQDTARVS HNTQLFRFSF
101: DPSAELGLHV ASCLLTRAPL GYNAEGKTKY VIRPYTPISD PEAKGYFDLL IKVYPDGKMS QHFASLKPGD VLEVKGPVEK FKYSPNMKKH IGMIAGGSGI
201: TPMLQVIDAI VKNPEDNTQI SLLYANVSPD DILLKQKLDV LQANHPNLKI FYTVDNPTKN WKGGVGYISK DMALKGLPLP TDDTLILVCG PPGMMEHISG
301: GKAPDWSQGE VKGILKELGY TEEMVFKF

Arabidopsis Description

CBR2NADH-cytochrome b5 reductase-like protein [Source:UniProtKB/Swiss-Prot;Acc:P83291]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.