Factsheet for AT5G20080.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 6

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_11s0016g04970.t01	Wine grape	mitochondrion	74.09	74.54
KRH56619	Soybean	mitochondrion	71.65	72.76
KRH03716	Soybean	mitochondrion	70.12	72.1
Solyc05g018520.2.1	Tomato	plastid	70.12	71.21
EES00217	Sorghum	mitochondrion	66.77	70.42
HORVU3Hr1G024170.3	Barley	mitochondrion	65.85	69.45
Os01t0174300-01	Rice	mitochondrion	65.85	69.45
Zm00001d039656_P003	Maize	mitochondrion	65.24	68.81
TraesCS3B01G147600.1	Wheat	mitochondrion, unclear	64.33	68.28
TraesCS3A01G128600.1	Wheat	mitochondrion	64.33	68.06
TraesCS3D01G129500.1	Wheat	mitochondrion	64.02	67.96
GSMUA_Achr10P...	Banana	mitochondrion	67.68	67.07
AT5G17770.1	Thale cress	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, vacuole	35.67	41.64
AT1G37130.1	Thale cress	cytosol	30.18	10.8
AT1G77760.1	Thale cress	cytosol	29.27	10.47

Protein Annotations

Gene3D:2.40.30.10	Gene3D:3.40.50.80	MapMan:50.1.6	EntrezGene:832130	UniProt:A0A178UKJ1	ProteinID:AED92791.1
EMBL:AF296836	EMBL:AK226864	ArrayExpress:AT5G20080	EnsemblPlantsGene:AT5G20080	RefSeq:AT5G20080	TAIR:AT5G20080
RefSeq:AT5G20080-TAIR-G	EnsemblPlants:AT5G20080.1	TAIR:AT5G20080.1	EMBL:AY087280	EMBL:BT024720	InterPro:Fd_Rdtase_FAD-bd
InterPro:Flavoprot_Pyr_Nucl_cyt_Rdtase	GO:GO:0003674	GO:GO:0003824	GO:GO:0004128	GO:GO:0005488	GO:GO:0005507
GO:GO:0005575	GO:GO:0005618	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739
GO:GO:0005758	GO:GO:0005794	GO:GO:0006950	GO:GO:0008150	GO:GO:0008152	GO:GO:0009505
GO:GO:0009628	GO:GO:0009651	GO:GO:0016491	GO:GO:0030312	GO:GO:0055114	InterPro:IPR017927
InterPro:NADH-Cyt_B5_reductase	RefSeq:NP_568391.1	ProteinID:OAO93251.1	InterPro:OxRdtase_FAD-bd_dom	InterPro:OxRdtase_FAD/NAD-bd	UniProt:P83291
PFAM:PF00175	PFAM:PF00970	PO:PO:0000013	PO:PO:0000037	PO:PO:0000230	PO:PO:0000293
PO:PO:0001054	PO:PO:0001078	PO:PO:0001081	PO:PO:0001185	PO:PO:0004507	PO:PO:0007064
PO:PO:0007095	PO:PO:0007098	PO:PO:0007103	PO:PO:0007115	PO:PO:0007123	PO:PO:0007131
PO:PO:0007611	PO:PO:0007616	PO:PO:0008019	PO:PO:0009005	PO:PO:0009006	PO:PO:0009009
PO:PO:0009010	PO:PO:0009025	PO:PO:0009029	PO:PO:0009030	PO:PO:0009031	PO:PO:0009032
PO:PO:0009046	PO:PO:0009047	PO:PO:0009052	PO:PO:0020030	PO:PO:0020038	PO:PO:0020100
PO:PO:0020137	PO:PO:0025022	PO:PO:0025281	PRINTS:PR00371	PRINTS:PR00406	PFscan:PS51384
PANTHER:PTHR19370	PANTHER:PTHR19370:SF174	UniProt:Q29Q36	InterPro:Riboflavin_synthase-like_b-brl	SUPFAM:SSF52343	SUPFAM:SSF63380
UniParc:UPI00000AADD8	:	:	:	:	:

Description

CBR2NADH-cytochrome b5 reductase-like protein [Source:UniProtKB/Swiss-Prot;Acc:P83291]

Coordinates

chr5:+:6782511..6786847

Molecular Weight (calculated)

35989.4 Da

IEP (calculated)

9.067

GRAVY (calculated)

-0.213

Length

328 amino acids

Sequence
(BLAST)

001: MATSFFRRLA RSAPITFPVA FGSQSKSGSG AFRFSTGAIA ALSGGFSYYY LTSGNNLVYL DQAKEETGPK TALNPDKWLE FKLQDTARVS HNTQLFRFSF
101: DPSAELGLHV ASCLLTRAPL GYNAEGKTKY VIRPYTPISD PEAKGYFDLL IKVYPDGKMS QHFASLKPGD VLEVKGPVEK FKYSPNMKKH IGMIAGGSGI
201: TPMLQVIDAI VKNPEDNTQI SLLYANVSPD DILLKQKLDV LQANHPNLKI FYTVDNPTKN WKGGVGYISK DMALKGLPLP TDDTLILVCG PPGMMEHISG
301: GKAPDWSQGE VKGILKELGY TEEMVFKF

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.