Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, extracellular, endoplasmic reticulum, vacuole, mitochondrion, cytosol, plasma membrane, golgi
Predictor Summary:
Predictor Summary:
- cytosol 2
- extracellular 3
- endoplasmic reticulum 3
- vacuole 3
- plasma membrane 3
- golgi 3
- peroxisome 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY38457 | Canola | endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole | 93.59 | 93.59 |
| Bra002104.1-P | Field mustard | endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole | 92.88 | 92.88 |
| CDY59316 | Canola | endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole | 92.88 | 92.88 |
| CDY02688 | Canola | endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole | 92.53 | 92.53 |
| Bra023636.1-P | Field mustard | endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole | 81.49 | 91.24 |
| Bra006419.1-P | Field mustard | endoplasmic reticulum | 91.1 | 90.78 |
| CDX78759 | Canola | endoplasmic reticulum | 90.75 | 90.75 |
| KRG94933 | Soybean | mitochondrion | 76.51 | 89.21 |
| CDX70774 | Canola | endoplasmic reticulum | 86.12 | 88.97 |
| KRH64963 | Soybean | endoplasmic reticulum | 82.92 | 83.81 |
| PGSC0003DMT400072515 | Potato | endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole | 81.85 | 82.73 |
| Solyc10g081440.1.1 | Tomato | extracellular, plastid | 81.14 | 82.01 |
| CDY63711 | Canola | cytosol | 64.06 | 81.45 |
| VIT_08s0056g01150.t01 | Wine grape | endoplasmic reticulum | 79.72 | 80.87 |
| TraesCS1B01G316400.1 | Wheat | unclear | 77.94 | 78.49 |
| EES18413 | Sorghum | plastid | 77.58 | 78.14 |
| TraesCS1A01G305700.1 | Wheat | golgi | 77.22 | 77.78 |
| TraesCS1D01G305400.1 | Wheat | endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole | 77.22 | 77.78 |
| Os05t0488900-01 | Rice | endoplasmic reticulum | 77.94 | 77.66 |
| GSMUA_Achr8P21540_001 | Banana | endoplasmic reticulum | 76.16 | 77.26 |
| TraesCS3A01G338700.1 | Wheat | golgi | 75.8 | 76.34 |
| TraesCS3B01G370400.1 | Wheat | endoplasmic reticulum | 75.8 | 76.34 |
| TraesCS3D01G332300.1 | Wheat | unclear | 75.8 | 76.34 |
| EES03792 | Sorghum | endoplasmic reticulum | 74.73 | 75.27 |
| Os01t0814900-01 | Rice | plasma membrane | 73.67 | 74.19 |
| Zm00001d038529_P003 | Maize | plasma membrane | 78.29 | 71.2 |
| Zm00001d043098_P002 | Maize | endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole | 74.38 | 68.3 |
| HORVU3Hr1G079960.7 | Barley | endoplasmic reticulum | 50.53 | 64.25 |
| Zm00001d017490_P001 | Maize | mitochondrion | 20.64 | 56.31 |
| AT5G20080.1 | Thale cress | mitochondrion | 41.64 | 35.67 |
| CDY16891 | Canola | golgi, plasma membrane, vacuole | 93.59 | 33.08 |
| AT1G37130.1 | Thale cress | cytosol | 36.3 | 11.12 |
| AT1G77760.1 | Thale cress | cytosol | 34.52 | 10.58 |
Protein Annotations
| Gene3D:2.40.30.10 | Gene3D:3.40.50.80 | MapMan:50.1.6 | EntrezGene:831645 | UniProt:A0A178US77 | EMBL:AB007799 |
| ProteinID:AED92466.1 | EMBL:AK316787 | ArrayExpress:AT5G17770 | EnsemblPlantsGene:AT5G17770 | RefSeq:AT5G17770 | TAIR:AT5G17770 |
| RefSeq:AT5G17770-TAIR-G | EnsemblPlants:AT5G17770.1 | TAIR:AT5G17770.1 | Symbol:ATCBR | EMBL:AY059822 | EMBL:AY072482 |
| EMBL:AY085728 | ProteinID:BAA74838.1 | ProteinID:BAB09576.1 | InterPro:Fd_Rdtase_FAD-bd | InterPro:Flavoprot_Pyr_Nucl_cyt_Rdtase | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0004128 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005618 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005739 | GO:GO:0005741 | GO:GO:0005783 |
| GO:GO:0005886 | GO:GO:0006091 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009505 | GO:GO:0009987 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016491 | GO:GO:0022900 | GO:GO:0030312 | GO:GO:0055114 |
| InterPro:IPR017927 | InterPro:NADH-Cyt_B5_reductase | RefSeq:NP_197279.1 | ProteinID:OAO95551.1 | InterPro:OxRdtase_FAD-bd_dom | InterPro:OxRdtase_FAD/NAD-bd |
| PFAM:PF00175 | PFAM:PF00970 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 |
| PO:PO:0001016 | PO:PO:0001017 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 |
| PO:PO:0004507 | PO:PO:0005052 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 |
| PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 |
| PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 |
| PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 |
| PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025195 | PO:PO:0025281 |
| PRINTS:PR00371 | PRINTS:PR00406 | PFscan:PS51384 | PANTHER:PTHR19370 | PANTHER:PTHR19370:SF175 | UniProt:Q9ZNT1 |
| InterPro:Riboflavin_synthase-like_b-brl | SUPFAM:SSF52343 | SUPFAM:SSF63380 | TMHMM:TMhelix | UniParc:UPI00000A0C3F | SEG:seg |
Description
CBR1NADH-cytochrome b5 reductase [Source:UniProtKB/TrEMBL;Acc:A0A178US77]
Coordinates
chr5:-:5864182..5866809
Molecular Weight (calculated)
31492.3 Da
IEP (calculated)
8.586
GRAVY (calculated)
-0.191
Length
281 amino acids
Sequence
(BLAST)
(BLAST)
001: MDTEFLRTLD RQILLGVFVA FVAVGAGAAY FLTSSKKRRV CLDPENFKEF KLVKRHQLSH NVAKFVFELP TSTSVLGLPI GQHISCRGKD GQGEDVIKPY
101: TPTTLDSDVG RFELVIKMYP QGRMSHHFRE MRVGDHLAVK GPKGRFKYQP GQFRAFGMLA GGSGITPMFQ VARAILENPT DKTKVHLIYA NVTYDDILLK
201: EELEGLTTNY PEQFKIFYVL NQPPEVWDGG VGFVSKEMIQ THCPAPASDI QILRCGPPPM NKAMAANLEA LGYSPEMQFQ F
101: TPTTLDSDVG RFELVIKMYP QGRMSHHFRE MRVGDHLAVK GPKGRFKYQP GQFRAFGMLA GGSGITPMFQ VARAILENPT DKTKVHLIYA NVTYDDILLK
201: EELEGLTTNY PEQFKIFYVL NQPPEVWDGG VGFVSKEMIQ THCPAPASDI QILRCGPPPM NKAMAANLEA LGYSPEMQFQ F
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.