Factsheet for Os01t0814900-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

cytosol 1
mitochondrion 2
extracellular 3
endoplasmic reticulum 4
vacuole 3
plasma membrane 3
golgi 3
peroxisome 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, mitochondrion, peroxisome, plastid, secretory
BaCelLo:	cytosol
EpiLoc:	mitochondrion
iPSORT:	secretory
MultiLoc:	peroxisome
Plant-mPloc:	mitochondrion
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	endoplasmic reticulum

plasma membrane: 18260611
plasma membrane: 27800704

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

msms PMID: 18260611 doi

SH Natera, KL Ford, AM Cassin, JH Patterson, EJ Newbigin, A Bacic

Plant Cell Biology Research Centre, VIC, Australia. s.natera@unimelb.edu.au

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES03792	Sorghum	endoplasmic reticulum	91.4	91.4
HORVU3Hr1G080010.1	Barley	cytosol, peroxisome	26.16	90.12
TraesCS3D01G332300.1	Wheat	unclear	89.96	89.96
TraesCS3A01G338700.1	Wheat	golgi	89.96	89.96
TraesCS3B01G370400.1	Wheat	endoplasmic reticulum	89.25	89.25
Os05t0488900-01	Rice	endoplasmic reticulum	85.66	84.75
KRG94933	Soybean	mitochondrion	72.76	84.23
Zm00001d043098_P002	Maize	endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole	90.68	82.68
GSMUA_Achr8P21540_001	Banana	endoplasmic reticulum	80.65	81.23
KRH64963	Soybean	endoplasmic reticulum	79.57	79.86
VIT_08s0056g01150.t01	Wine grape	endoplasmic reticulum	77.42	77.98
CDX78759	Canola	endoplasmic reticulum	75.99	75.44
Solyc10g081440.1.1	Tomato	extracellular, plastid	74.91	75.18
PGSC0003DMT400072515	Potato	endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole	74.91	75.18
Bra006419.1-P	Field mustard	endoplasmic reticulum	75.63	74.82
CDY38457	Canola	endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole	75.27	74.73
CDY59316	Canola	endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole	74.91	74.38
Bra002104.1-P	Field mustard	endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole	74.91	74.38
CDY02688	Canola	endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole	74.55	74.02
AT5G17770.1	Thale cress	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, vacuole	74.19	73.67
CDX70774	Canola	endoplasmic reticulum	71.68	73.53
Bra023636.1-P	Field mustard	endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole	65.59	72.91
CDY63711	Canola	cytosol	56.27	71.04
Zm00001d017490_P001	Maize	mitochondrion	24.01	65.05
Os01t0174300-01	Rice	mitochondrion	44.44	39.87
CDY28560	Canola	endoplasmic reticulum	25.81	37.7
CDY16891	Canola	golgi, plasma membrane, vacuole	75.27	26.42
Os08t0468100-01	Rice	plastid	40.86	12.45
Os08t0468700-00	Rice	plastid	40.86	12.45
Os02t0770800-01	Rice	cytosol	37.99	11.92

Protein Annotations

Gene3D:2.40.30.10	Gene3D:3.40.50.80	EntrezGene:4327480	MapMan:50.1.6	EMBL:AK058594	EMBL:AK071859
EMBL:AK103964	ProteinID:BAD82696.1	ProteinID:BAF06526.1	ProteinID:BAS74912.1	ProteinID:EAZ13930.1	InterPro:Fd_Rdtase_FAD-bd
InterPro:Flavoprot_Pyr_Nucl_cyt_Rdtase	GO:GO:0003674	GO:GO:0003824	GO:GO:0004128	GO:GO:0005575	GO:GO:0006091
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016491
GO:GO:0022900	GO:GO:0055114	InterPro:IPR017927	InterPro:NADH-Cyt_B5_reductase	EnsemblPlantsGene:Os01g0814900	EnsemblPlants:Os01t0814900-01
InterPro:OxRdtase_FAD-bd_dom	InterPro:OxRdtase_FAD/NAD-bd	PFAM:PF00175	PFAM:PF00970	PRINTS:PR00371	PRINTS:PR00406
PFscan:PS51384	PANTHER:PTHR19370	PANTHER:PTHR19370:SF175	UniProt:Q5N760	InterPro:Riboflavin_synthase-like_b-brl	SUPFAM:SSF52343
SUPFAM:SSF63380	TMHMM:TMhelix	UniParc:UPI000049EAE3	RefSeq:XP_015634676.1	SEG:seg	:

Description

cytochrome b5 reductaseSimilar to Cytochrome b5 reductase. (Os01t0814900-01)

Coordinates

chr1:-:34652114..34655453

Molecular Weight (calculated)

31025.9 Da

IEP (calculated)

9.015

GRAVY (calculated)

-0.173

Length

279 amino acids

Sequence
(BLAST)

001: MDLLHGESVQ TTVAIAVAVV AVAAGGAFLL LRSRKPKGCL DPENFKKFKL VEKKQISHNV ARFKFALPTP TSVLGLPIGQ HISCRGQDAT GEEVIKPYTP
101: TTLDSDLGHF ELVIKMYPQG RMSHHFREMK VGDYMSVKGP KGRFRYQVGQ VRAFGMLAGG SGITPMFQVA RAILENPNDI TKVHLVYANV THDDILLKEE
201: LDNMAKTYPD RFKIYYVLNQ PPEVWNGGVG FVSQDMIKAH LPAPAEDIQI LRCGPPPMNK AMAAHLDELG YTKEMQFQF

Best Arabidopsis Sequence Match ( AT5G17770.1 )
(BLAST)

001: MDTEFLRTLD RQILLGVFVA FVAVGAGAAY FLTSSKKRRV CLDPENFKEF KLVKRHQLSH NVAKFVFELP TSTSVLGLPI GQHISCRGKD GQGEDVIKPY
101: TPTTLDSDVG RFELVIKMYP QGRMSHHFRE MRVGDHLAVK GPKGRFKYQP GQFRAFGMLA GGSGITPMFQ VARAILENPT DKTKVHLIYA NVTYDDILLK
201: EELEGLTTNY PEQFKIFYVL NQPPEVWDGG VGFVSKEMIQ THCPAPASDI QILRCGPPPM NKAMAANLEA LGYSPEMQFQ F

Arabidopsis Description

CBR1NADH-cytochrome b5 reductase [Source:UniProtKB/TrEMBL;Acc:A0A178US77]
SUBAcon: [peroxisome,extracellular,endoplasmic reticulum,vacuole,mitochondrion,cytosol,plasma membrane,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.