Factsheet for Bra006419.1-P

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

cytosol 1
mitochondrion 2
extracellular 3
endoplasmic reticulum 4
vacuole 3
plasma membrane 3
golgi 3
peroxisome 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	cytosol, mitochondrion, peroxisome, plastid, secretory
BaCelLo:	cytosol
EpiLoc:	mitochondrion
iPSORT:	secretory
MultiLoc:	peroxisome
Plant-mPloc:	mitochondrion
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX78759	Canola	endoplasmic reticulum	98.23	98.58
Bra002104.1-P	Field mustard	endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole	91.84	92.17
AT5G17770.1	Thale cress	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, vacuole	90.78	91.1
Bra023636.1-P	Field mustard	endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole	80.85	90.84
KRG94933	Soybean	mitochondrion	74.47	87.14
KRH64963	Soybean	endoplasmic reticulum	82.27	83.45
PGSC0003DMT400072515	Potato	endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole	79.79	80.94
Solyc10g081440.1.1	Tomato	extracellular, plastid	79.43	80.58
TraesCS1B01G316400.1	Wheat	unclear	78.72	79.57
EES18413	Sorghum	plastid	78.37	79.21
TraesCS1D01G305400.1	Wheat	endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole	78.01	78.85
TraesCS1A01G305700.1	Wheat	golgi	78.01	78.85
Os05t0488900-01	Rice	endoplasmic reticulum	78.72	78.72
VIT_08s0056g01150.t01	Wine grape	endoplasmic reticulum	77.31	78.7
GSMUA_Achr8P21540_001	Banana	endoplasmic reticulum	76.6	77.98
EES03792	Sorghum	endoplasmic reticulum	76.95	77.78
TraesCS3A01G338700.1	Wheat	golgi	75.89	76.7
TraesCS3B01G370400.1	Wheat	endoplasmic reticulum	75.89	76.7
TraesCS3D01G332300.1	Wheat	unclear	75.89	76.7
Os01t0814900-01	Rice	plasma membrane	74.82	75.63
Zm00001d038529_P003	Maize	plasma membrane	77.66	70.87
Zm00001d043098_P002	Maize	endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole	75.53	69.61
HORVU3Hr1G079960.7	Barley	endoplasmic reticulum	52.84	67.42
Zm00001d017490_P001	Maize	mitochondrion	20.21	55.34
Bra015656.1-P	Field mustard	cytosol	35.82	11.35
Bra003670.1-P	Field mustard	plastid	35.46	10.99
Bra008333.1-P	Field mustard	plastid	34.75	10.82

Protein Annotations

Gene3D:2.40.30.10	Gene3D:3.40.50.80	MapMan:50.1.6	EnsemblPlantsGene:Bra006419	EnsemblPlants:Bra006419.1	EnsemblPlants:Bra006419.1-P
InterPro:Fd_Rdtase_FAD-bd	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0008150	GO:GO:0008152
GO:GO:0016020	GO:GO:0016021	GO:GO:0016491	GO:GO:0055114	InterPro:IPR017927	UniProt:M4CQD0
InterPro:NADH-Cyt_B5_reductase	InterPro:OxRdtase_FAD-bd_dom	InterPro:OxRdtase_FAD/NAD-bd	PFAM:PF00175	PFAM:PF00970	PRINTS:PR00406
PFscan:PS51384	PANTHER:PTHR19370	PANTHER:PTHR19370:SF175	InterPro:Riboflavin_synthase-like_b-brl	SUPFAM:SSF52343	SUPFAM:SSF63380
TMHMM:TMhelix	UniParc:UPI000253FDE6	SEG:seg	:	:	:

Description

AT5G17770 (E=9e-146) ATCBR, CBR1 | ATCBR (ARABIDOPSIS THALIANA NADH:CYTOCHROME B5 REDUCTASE 1); cytochrome-b5 reductase

Coordinates

chrA03:-:3427963..3429928

Molecular Weight (calculated)

31370.3 Da

IEP (calculated)

8.298

GRAVY (calculated)

-0.124

Length

282 amino acids

Sequence
(BLAST)

001: MDIEFLRTLD PQILLGVFVA LVAIGAGAAY YLSSSSKKRR GCLDPEKFKE FKLVKKQQLS HNVAKFVFEL PTPTSVLGLP IGQHISCRGK DAQGEEVIKP
101: YTPTTLDSDL GRFELVIKMY PQGRMSHHFR EMLVGDHLAV KGPKGRFKYQ PGPFRAFGML AGGSGITPMF QVARAILENP TDKTKVHLIY ANVTYDDILL
201: KDELDSLTAN YPDQFKIYYV LNQPPEVWDG GVGFVTKEMI QAHCPAPASD IQILRCGPPP MNKAMAANLE ALGYSPEMLF QF

Best Arabidopsis Sequence Match ( AT5G17770.1 )
(BLAST)

001: MDTEFLRTLD RQILLGVFVA FVAVGAGAAY FLTSSKKRRV CLDPENFKEF KLVKRHQLSH NVAKFVFELP TSTSVLGLPI GQHISCRGKD GQGEDVIKPY
101: TPTTLDSDVG RFELVIKMYP QGRMSHHFRE MRVGDHLAVK GPKGRFKYQP GQFRAFGMLA GGSGITPMFQ VARAILENPT DKTKVHLIYA NVTYDDILLK
201: EELEGLTTNY PEQFKIFYVL NQPPEVWDGG VGFVSKEMIQ THCPAPASDI QILRCGPPPM NKAMAANLEA LGYSPEMQFQ F

Arabidopsis Description

CBR1NADH-cytochrome b5 reductase [Source:UniProtKB/TrEMBL;Acc:A0A178US77]
SUBAcon: [peroxisome,extracellular,endoplasmic reticulum,vacuole,mitochondrion,cytosol,plasma membrane,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.