Factsheet for HORVU3Hr1G024170.3

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 6

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Predotar:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	mitochondrion

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU4Hr1G035250.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G20080.1	HORVU4Hr1G035250.1	AT4G26630.1	25387881

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G147600.1	Wheat	mitochondrion, unclear	94.86	95.47
TraesCS3A01G128600.1	Wheat	mitochondrion	94.21	94.52
TraesCS3D01G129500.1	Wheat	mitochondrion	93.89	94.5
EES00217	Sorghum	mitochondrion	89.39	89.39
Os01t0174300-01	Rice	mitochondrion	89.07	89.07
Zm00001d039656_P003	Maize	mitochondrion	87.14	87.14
GSMUA_Achr10P...	Banana	mitochondrion	76.85	72.21
VIT_11s0016g04970.t01	Wine grape	mitochondrion	72.99	69.63
KRH56619	Soybean	mitochondrion	68.49	65.94
AT5G20080.1	Thale cress	mitochondrion	69.45	65.85
KRH03716	Soybean	mitochondrion	67.52	65.83
Solyc05g018520.2.1	Tomato	plastid	67.85	65.33
HORVU0Hr1G031690.1	Barley	mitochondrion, nucleus, peroxisome	27.65	52.44
HORVU3Hr1G080010.1	Barley	cytosol, peroxisome	12.22	46.91
HORVU1Hr1G068870.1	Barley	endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole	40.19	44.8
HORVU3Hr1G079960.7	Barley	endoplasmic reticulum	26.69	37.56
HORVU6Hr1G003300.1	Barley	mitochondrion	34.73	11.36

Protein Annotations

Gene3D:2.40.30.10	Gene3D:3.40.50.80	MapMan:50.1.6	UniProt:A0A287KG12	InterPro:Fd_Rdtase_FAD-bd	InterPro:Flavoprot_Pyr_Nucl_cyt_Rdtase
GO:GO:0003674	GO:GO:0003824	GO:GO:0004128	GO:GO:0005488	GO:GO:0005507	GO:GO:0005575
GO:GO:0005618	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0005794
GO:GO:0006950	GO:GO:0008150	GO:GO:0008152	GO:GO:0009505	GO:GO:0009628	GO:GO:0009651
GO:GO:0016491	GO:GO:0030312	GO:GO:0055114	EnsemblPlantsGene:HORVU3Hr1G024170	EnsemblPlants:HORVU3Hr1G024170.3	InterPro:IPR017927
InterPro:NADH-Cyt_B5_reductase	InterPro:OxRdtase_FAD-bd_dom	InterPro:OxRdtase_FAD/NAD-bd	PFAM:PF00175	PFAM:PF00970	PRINTS:PR00371
PRINTS:PR00406	PFscan:PS51384	PANTHER:PTHR19370	PANTHER:PTHR19370:SF174	InterPro:Riboflavin_synthase-like_b-brl	SUPFAM:SSF52343
SUPFAM:SSF63380	UniParc:UPI000B4637DF	SEG:seg	:	:	:

Description

NADH-cytochrome b5 reductase [Source:UniProtKB/TrEMBL;Acc:A0A287KG12]

Coordinates

chrchr3H:+:91866118..91870091

Molecular Weight (calculated)

33960.1 Da

IEP (calculated)

9.287

GRAVY (calculated)

-0.234

Length

311 amino acids

Sequence
(BLAST)

001: MAALLMRRLA GSYRGRAPLA AAAAAGGAAL FYASSNPTIV RDLPEKGEDA AAKVALNPEK WLEFKLQEKA TVSHDSELFR FSFDPSTKLG LDVASCLVTR
101: APIGQEVEGR RKYVIRPYTP ISDPDSKGHF DLLIKVYPDG KMSQHFASLK PGDVLEVKGP IEKLRYSPNM KRQIGMIAGG TGITPMLQVV RAILKNPDDN
201: TQVSLIYANV SPDDILLKRE LDRLASSYPN FKVFYTVDKP SSDWRGGVGY ISKDMVLKGL PGPGEDSLIL VCGPPGMMNH ISGDKAKDYS QGEVTGLLKD
301: LGYTSQMVYK F

Best Arabidopsis Sequence Match ( AT5G20080.1 )
(BLAST)

001: MATSFFRRLA RSAPITFPVA FGSQSKSGSG AFRFSTGAIA ALSGGFSYYY LTSGNNLVYL DQAKEETGPK TALNPDKWLE FKLQDTARVS HNTQLFRFSF
101: DPSAELGLHV ASCLLTRAPL GYNAEGKTKY VIRPYTPISD PEAKGYFDLL IKVYPDGKMS QHFASLKPGD VLEVKGPVEK FKYSPNMKKH IGMIAGGSGI
201: TPMLQVIDAI VKNPEDNTQI SLLYANVSPD DILLKQKLDV LQANHPNLKI FYTVDNPTKN WKGGVGYISK DMALKGLPLP TDDTLILVCG PPGMMEHISG
301: GKAPDWSQGE VKGILKELGY TEEMVFKF

Arabidopsis Description

CBR2NADH-cytochrome b5 reductase-like protein [Source:UniProtKB/Swiss-Prot;Acc:P83291]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.