Factsheet for HORVU1Hr1G068870.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, extracellular, endoplasmic reticulum, vacuole, mitochondrion, plastid, plasma membrane, golgi

Predictor Summary:

cytosol 1
mitochondrion 3
extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2
peroxisome 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion, peroxisome, plastid, secretory
Any Predictor:	cytosol, mitochondrion, peroxisome, plastid, secretory
BaCelLo:	cytosol
EpiLoc:	mitochondrion
iPSORT:	secretory
MultiLoc:	peroxisome
Plant-mPloc:	mitochondrion
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU0Hr1G031690.1	Barley	mitochondrion, nucleus, peroxisome	58.78	100.0
TraesCS1A01G305700.1	Wheat	golgi	98.92	98.92
TraesCS1B01G316400.1	Wheat	unclear	98.92	98.92
TraesCS1D01G305400.1	Wheat	endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole	98.21	98.21
EES18413	Sorghum	plastid	91.04	91.04
Os05t0488900-01	Rice	endoplasmic reticulum	89.96	89.01
HORVU3Hr1G080010.1	Barley	cytosol, peroxisome	24.01	82.72
GSMUA_Achr8P21540_001	Banana	endoplasmic reticulum	81.36	81.95
Zm00001d038529_P003	Maize	plasma membrane	89.96	81.23
HORVU3Hr1G079960.7	Barley	endoplasmic reticulum	53.76	67.87
HORVU3Hr1G024170.3	Barley	mitochondrion	44.8	40.19
HORVU6Hr1G003300.1	Barley	mitochondrion	38.71	11.36

Protein Annotations

Gene3D:2.40.30.10	Gene3D:3.40.50.80	MapMan:50.1.6	EMBL:AK370690	UniProt:F2E3G7	InterPro:Fd_Rdtase_FAD-bd
InterPro:Flavoprot_Pyr_Nucl_cyt_Rdtase	GO:GO:0003674	GO:GO:0003824	GO:GO:0004128	GO:GO:0005575	GO:GO:0008150
GO:GO:0008152	GO:GO:0016020	GO:GO:0016021	GO:GO:0016491	GO:GO:0055114	EnsemblPlantsGene:HORVU1Hr1G068870
EnsemblPlants:HORVU1Hr1G068870.1	InterPro:IPR017927	InterPro:NADH-Cyt_B5_reductase	InterPro:OxRdtase_FAD-bd_dom	InterPro:OxRdtase_FAD/NAD-bd	PFAM:PF00175
PFAM:PF00970	PRINTS:PR00371	PRINTS:PR00406	PFscan:PS51384	PANTHER:PTHR19370	PANTHER:PTHR19370:SF175
InterPro:Riboflavin_synthase-like_b-brl	SUPFAM:SSF52343	SUPFAM:SSF63380	TMHMM:TMhelix	UniParc:UPI0001D62E89	SEG:seg

Description

NADH-cytochrome b5 reductase [Source:UniProtKB/TrEMBL;Acc:F2E3G7]

Coordinates

chrchr1H:-:482441098..482444797

Molecular Weight (calculated)

30969.6 Da

IEP (calculated)

8.298

GRAVY (calculated)

-0.175

Length

279 amino acids

Sequence
(BLAST)

001: MEFLHGQSTE TTVAVAVAVV AVAAGAGFLL LRSKKPKGCL DAENFKEFKL VQKRQISHNV AKFKFALPTP TSVLGLPIGQ HISCRGQDAT GEEVIKPYTP
101: TTLDSDIGYF ELVIKMYPQG RMSHHFREMK VGDYMSVKGP KGRFKYQPGQ VRAFGMIAGG SGITPMFQVT RAILENPSDN TKIHLIYANV TYDDILLLEE
201: LDNMAKNYPD RFKIYYVLNQ PPEVWDGGVG FVSKEMIQAH CPAPAADIQI LRCGPPPMNK AMAANLDDLG YTKEMQFQF

Best Arabidopsis Sequence Match ( AT5G17770.1 )
(BLAST)

001: MDTEFLRTLD RQILLGVFVA FVAVGAGAAY FLTSSKKRRV CLDPENFKEF KLVKRHQLSH NVAKFVFELP TSTSVLGLPI GQHISCRGKD GQGEDVIKPY
101: TPTTLDSDVG RFELVIKMYP QGRMSHHFRE MRVGDHLAVK GPKGRFKYQP GQFRAFGMLA GGSGITPMFQ VARAILENPT DKTKVHLIYA NVTYDDILLK
201: EELEGLTTNY PEQFKIFYVL NQPPEVWDGG VGFVSKEMIQ THCPAPASDI QILRCGPPPM NKAMAANLEA LGYSPEMQFQ F

Arabidopsis Description

CBR1NADH-cytochrome b5 reductase [Source:UniProtKB/TrEMBL;Acc:A0A178US77]
SUBAcon: [peroxisome,extracellular,endoplasmic reticulum,vacuole,mitochondrion,cytosol,plasma membrane,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.