Factsheet for HORVU6Hr1G003300.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
TargetP:	mitochondrion
YLoc:	mitochondrion

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU0Hr1G027080.4
HORVU6Hr1G062870.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G77760.1	HORVU0Hr1G027080.4	AT3G48150.1	21798944
AT1G77760.1	HORVU6Hr1G062870.1	AT3G48150.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G020700.1	Wheat	cytosol, plastid	92.11	95.84
TraesCS6B01G024900.1	Wheat	cytosol, plastid	91.8	95.51
TraesCS6A01G017500.2	Wheat	cytosol, plastid	91.69	95.4
Os08t0468100-01	Rice	plastid	82.54	85.7
Os08t0468700-00	Rice	plastid	81.6	84.72
Zm00001d049995_P001	Maize	cytosol, mitochondrion, peroxisome, plastid	60.04	84.59
EES13985	Sorghum	cytosol, mitochondrion, peroxisome, plastid	81.81	84.47
Zm00001d031769_P001	Maize	mitochondrion	60.25	83.28
GSMUA_Achr9P15480_001	Banana	cytosol	60.88	77.1
GSMUA_Achr8P23160_001	Banana	mitochondrion	51.73	71.93
VIT_18s0001g03910.t01	Wine grape	plastid	67.61	70.74
CDY68886	Canola	cytosol, mitochondrion	53.73	70.29
KRH18816	Soybean	cytosol, mitochondrion, peroxisome	64.25	68.96
PGSC0003DMT400077648	Potato	cytosol	65.93	68.83
Solyc11g013810.1.1	Tomato	cytosol, nucleus	65.93	68.75
KRH53180	Soybean	cytosol, mitochondrion, peroxisome	63.72	68.09
Bra015656.1-P	Field mustard	cytosol	61.62	65.84
CDX88386	Canola	cytosol, plastid	61.83	65.77
AT1G37130.1	Thale cress	cytosol	63.3	65.65
Bra003670.1-P	Field mustard	plastid	62.78	65.6
CDX79234	Canola	plastid	62.78	65.53
CDX68044	Canola	plastid	62.67	65.49
KRH16605	Soybean	cytosol	60.88	65.35
Bra008333.1-P	Field mustard	plastid	61.72	64.79
KRH16606	Soybean	cytosol	58.68	63.92
AT1G77760.1	Thale cress	cytosol	61.3	63.58
CDX87505	Canola	cytosol, mitochondrion, peroxisome, plastid	18.61	63.44
CDY26836	Canola	cytosol	36.49	62.3
KRH18814	Soybean	cytosol, mitochondrion, plastid	29.65	61.57
CDX87504	Canola	cytosol	32.7	60.15
GSMUA_Achr3P07200_001	Banana	cytosol	68.45	57.87
GSMUA_Achr5P05820_001	Banana	mitochondrion, nucleus, peroxisome	23.76	49.45
GSMUA_Achr5P05830_001	Banana	cytosol	17.25	45.81
HORVU0Hr1G031690.1	Barley	mitochondrion, nucleus, peroxisome	7.68	44.51
HORVU3Hr1G080010.1	Barley	cytosol, peroxisome	3.58	41.98
HORVU1Hr1G068870.1	Barley	endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole	11.36	38.71
HORVU3Hr1G024170.3	Barley	mitochondrion	11.36	34.73
HORVU3Hr1G079960.7	Barley	endoplasmic reticulum	7.68	33.03

Protein Annotations

Gene3D:2.40.30.10	Gene3D:2.60.40.650	MapMan:25.1.4.1	Gene3D:3.10.120.10	Gene3D:3.40.50.80	Gene3D:3.90.420.10
UniProt:A0A287T5U7	InterPro:Cyt_B5-like_heme/steroid-bd	InterPro:Cyt_B5-like_heme/steroid_sf	InterPro:Cyt_B5_heme-BS	InterPro:Fd_Rdtase_FAD-bd	InterPro:Flavoprot_Pyr_Nucl_cyt_Rdtase
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0006809	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0016491	GO:GO:0020037	GO:GO:0030151	GO:GO:0042128
GO:GO:0043546	GO:GO:0046872	GO:GO:0050464	GO:GO:0055114	EnsemblPlantsGene:HORVU6Hr1G003300	EnsemblPlants:HORVU6Hr1G003300.1
InterPro:IPR001199	InterPro:IPR017927	InterPro:IPR036374	InterPro:IPR036400	InterPro:Ig_E-set	InterPro:MoCF_OxRdtse_dimer
InterPro:Mopterin_OxRdtase_euk	InterPro:NADH-Cyt_B5_reductase	InterPro:Nitr_rd_NADH	InterPro:OxRdtase_FAD-bd_dom	InterPro:OxRdtase_FAD/NAD-bd	InterPro:OxRdtase_Mopterin-bd_dom
InterPro:OxRdtase_Mopterin-bd_sf	InterPro:OxRdtase_Mopterin_BS	PFAM:PF00173	PFAM:PF00174	PFAM:PF00175	PFAM:PF00970
PFAM:PF03404	PIRSF:PIRSF000233	PRINTS:PR00363	PRINTS:PR00371	PRINTS:PR00406	PRINTS:PR00407
ScanProsite:PS00191	ScanProsite:PS00559	PFscan:PS50255	PFscan:PS51384	PANTHER:PTHR19370	PANTHER:PTHR19370:SF182
InterPro:Riboflavin_synthase-like_b-brl	SMART:SM01117	SUPFAM:SSF52343	SUPFAM:SSF55856	SUPFAM:SSF56524	SUPFAM:SSF63380
SUPFAM:SSF81296	UniParc:UPI000B47E958	SEG:seg	:	:	:

Description

No Description!

Coordinates

chrchr6H:+:7696550..7701423

Molecular Weight (calculated)

105941.0 Da

IEP (calculated)

6.866

GRAVY (calculated)

-0.418

Length

951 amino acids

Sequence
(BLAST)

001: QATRCRRFLS FHFLIRRDQS RTGPTLACPT TQTHHTMAAS VEPRQPFGRL DAPATAPTAR APGSNGIRRR ADSPVRGCGF PSLISPPRKG RVAEEDEEDD
101: DEDDEGHEDW REAYGSHLQL EVEPSTRDPR DEGTADAWIE RNPSLIRLTG KHPLNCEPPL ARLMHHGFIT PAPLHYVRNH GAVPRGDWAT WTVEVTGLVR
201: RPARLTMDEL ANGFPAAEVP ATLVCAGNRR KEQNMVQQTV GFNWGAAGVS TSVWRGARLR DVLLRCGVMS KKGQALNVCF EGAEDLPGGG GSKYGTSVSR
301: EWAMDPSRDI ILAYAQNGEP LLPDHGYPVR VLIPGCIGGR MVKWVRRIVV TTAESDNYYH FKDNRVLPSH VDAELANAEA WWYRPEYIIN ELNTNSVITT
401: PGHDEILPIN AFTTQRAYTI KGYAYSGGGK KITRVEVTLD GGESWMLCTL DIPEKPNKYG RYWCWCFWSV EIEVLDLLGA KEVAVRAWDQ THNTQPEKLI
501: WNLMGMMNNC WFKIKVNVCR PHKGEIGLVF EHPTQPGNQT GGWMARQKHL ETAEAAAPGL KRSTSTPFMN TAGDKQFTMS EVRKHGSKES AWIVVHGHVY
601: DCTAFLKDHP GGADSILINA GSDCTEEFDA IHSDKAKALL DTYRIGELIT TGTGYNSDNS VHGGSSLSHL APIREATKVA GAPIALSSPR EKVPCRLVDK
701: KELSHDVRLF RFALPSSDQV LGLPVGKHIF VCATIDGKLC MRAYTPTSMV DEIGQFELLV KVYFRDEHPK FPNGGLMTQY LESLQVGSSS IDVKGPLGHV
801: EYTGRGNFVI NGKQRRARRL AMICGGSGIT PMYQVIQAVL RDQPEDETEM HLVYANRSED DILLRDELDR WATEYPDRLK VWYVIDQVKR PEDGWKFSVG
901: FVTEDILRAH VPEGGDDTLA LACGPPPMIK FAISPNLEKM KYDMANSFIS F

Best Arabidopsis Sequence Match ( AT1G77760.1 )
(BLAST)

001: MATSVDNRHY PTMNGVAHAF KPPLVPSPRS FDRHRHQNQT LDVILTETKI VKETEVITTV VDSYDDSSSD DEDESHNRNV PYYKELVKKS NSDLEPSILD
101: PRDESTADSW IQRNSSMLRL TGKHPFNAEA PLPRLMHHGF ITPVPLHYVR NHGAVPKANW SDWSIEITGL VKRPAKFTME ELISEFPSRE FPVTLVCAGN
201: RRKEQNMVKQ TIGFNWGSAG VSTSLWKGIP LSEILRRCGI YSRRGGALNV CFEGAEDLPG GGGSKYGTSI KKEMAMDPAR DIILAYMQNG ELLTPDHGFP
301: VRVIVPGFIG GRMVKWLKRI IVTPQESDSY YHYKDNRVLP SLVDAELANS EAWWYKPEYI INELNINSVI TTPGHAEILP INAFTTQKPY TLKGYAYSGG
401: GKKVTRVEVT LDGGDTWSVC ELDHQEKPNK YGKFWCWCFW SLDVEVLDLL SAKDVAVRAW DESFNTQPDK LIWNLMGMMN NCWFRIRTNV CKPHRGEIGI
501: VFEHPTRPGN QSGGWMAKER QLEISSESNN TLKKSVSSPF MNTASKMYSI SEVRKHNTAD SAWIIVHGHI YDCTRFLKDH PGGTDSILIN AGTDCTEEFE
601: AIHSDKAKKL LEDYRIGELI TTGYDSSPNV SVHGASNFGP LLAPIKELTP QKNIALVNPR EKIPVRLIEK TSISHDVRKF RFALPSEDQQ LGLPVGKHVF
701: VCANINDKLC LRAYTPTSAI DAVGHIDLVV KVYFKDVHPR FPNGGLMSQH LDSLPIGSMI DIKGPLGHIE YKGKGNFLVS GKPKFAKKLA MLAGGTGITP
801: IYQIIQSILS DPEDETEMYV VYANRTEDDI LVREELEGWA SKHKERLKIW YVVEIAKEGW SYSTGFITEA VLREHIPEGL EGESLALACG PPPMIQFALQ
901: PNLEKMGYNV KEDLLIF

Arabidopsis Description

NIA1Nitrate reductase [Source:UniProtKB/TrEMBL;Acc:A0A178WBR8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.