Factsheet for Zm00001d052139_P001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, peroxisome, cytosol

Predictor Summary:

peroxisome 1
mitochondrion 2
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, mitochondrion, peroxisome
Any Predictor:	mitochondrion, peroxisome
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	mitochondrion

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d017475_P002

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G77760.1	Zm00001d017475_P002	AT3G48150.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d018206_P001	Maize	peroxisome	94.14	92.42
Zm00001d031769_P001	Maize	mitochondrion	73.61	69.33
EES07601	Sorghum	cytosol, mitochondrion, peroxisome	95.06	69.06
Zm00001d049995_P001	Maize	cytosol, mitochondrion, peroxisome, plastid	71.6	68.74
Os02t0770800-01	Rice	cytosol	88.43	64.45
TraesCS6D01G306000.1	Wheat	cytosol, peroxisome, plastid	87.81	63.58
TraesCS6A01G326200.1	Wheat	plastid	87.19	62.85
TraesCS6B01G356800.1	Wheat	cytosol, peroxisome, plastid	86.88	62.76
GSMUA_Achr9P15480_001	Banana	cytosol	66.36	57.26
CDX87504	Canola	cytosol	45.22	56.67
GSMUA_Achr8P23160_001	Banana	mitochondrion	53.86	51.02
Zm00001d017025_P001	Maize	cytosol	68.67	50.0
KRH53180	Soybean	cytosol, mitochondrion, peroxisome	68.21	49.66
VIT_18s0001g03910.t01	Wine grape	plastid	68.36	48.73
KRH18816	Soybean	cytosol, mitochondrion, peroxisome	66.36	48.53
CDY68886	Canola	cytosol, mitochondrion	54.01	48.14
PGSC0003DMT400077648	Potato	cytosol	67.44	47.97
Solyc11g013810.1.1	Tomato	cytosol, nucleus	67.28	47.81
Bra003670.1-P	Field mustard	plastid	66.36	47.25
CDX79234	Canola	plastid	66.2	47.09
CDX68044	Canola	plastid	66.05	47.03
Bra008333.1-P	Field mustard	plastid	65.74	47.02
Bra015656.1-P	Field mustard	cytosol	64.35	46.85
AT1G37130.1	Thale cress	cytosol	65.9	46.56
CDX88386	Canola	cytosol, plastid	64.2	46.53
AT1G77760.1	Thale cress	cytosol	65.59	46.35
KRH16606	Soybean	cytosol	61.88	45.93
KRH16605	Soybean	cytosol	62.65	45.82
GSMUA_Achr3P07200_001	Banana	cytosol	69.91	40.27
KRH18814	Soybean	cytosol, mitochondrion, plastid	25.62	36.24
CDY26836	Canola	cytosol	29.01	33.75
GSMUA_Achr5P05830_001	Banana	cytosol	16.98	30.73
CDX87505	Canola	cytosol, mitochondrion, peroxisome, plastid	12.35	28.67
GSMUA_Achr5P05820_001	Banana	mitochondrion, nucleus, peroxisome	16.36	23.19
Zm00001d017490_P001	Maize	mitochondrion	3.55	22.33
Zm00001d038529_P003	Maize	plasma membrane	9.72	20.39
Zm00001d039656_P003	Maize	mitochondrion	9.26	19.29
Zm00001d043098_P002	Maize	endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole	8.64	18.3

Protein Annotations

Gene3D:2.60.40.650	MapMan:25.1.4.1	Gene3D:3.40.50.80	Gene3D:3.90.420.10	UniProt:A0A1D6QDP6	ProteinID:AQK56297.1
InterPro:Flavoprot_Pyr_Nucl_cyt_Rdtase	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016491	GO:GO:0030151	GO:GO:0042128	GO:GO:0043546	GO:GO:0046872
GO:GO:0055114	InterPro:IPR036374	InterPro:Ig_E-set	InterPro:MoCF_OxRdtse_dimer	InterPro:Mopterin_OxRdtase_euk	InterPro:NADH-Cyt_B5_reductase
InterPro:OxRdtase_FAD/NAD-bd	InterPro:OxRdtase_Mopterin-bd_dom	InterPro:OxRdtase_Mopterin-bd_sf	InterPro:OxRdtase_Mopterin_BS	PFAM:PF00174	PFAM:PF00175
PFAM:PF03404	PRINTS:PR00371	PRINTS:PR00406	PRINTS:PR00407	ScanProsite:PS00559	PANTHER:PTHR19370
PANTHER:PTHR19370:SF100	SUPFAM:SSF52343	SUPFAM:SSF56524	SUPFAM:SSF81296	UniParc:UPI000843BEF9	EnsemblPlantsGene:Zm00001d052139
EnsemblPlants:Zm00001d052139_P001	EnsemblPlants:Zm00001d052139_T001	SEG:seg	:	:	:

Description

Nitrate reductase

Coordinates

chr4:+:180632525..180635840

Molecular Weight (calculated)

72869.9 Da

IEP (calculated)

6.788

GRAVY (calculated)

-0.380

Length

648 amino acids

Sequence
(BLAST)

001: MAASVERHLA PHPWPANAPP KSFDMFRTGS DSDSEDEDSI PAVDWRSLYR PRLEVEPPVH DPRDEATSDA WVRRHPALVR LTGKHPFNSE PPVPRLMAHG
101: FITPAPLHYV RNHGAVPRAD WSTWTVEVTG LVTRPAKLTM ERLVTEFEAV ELPVTLVCAG NRRKEQNMVR QTVGFNWGPG AVSTSVWRGA RLRDVLRRCG
201: VMRAADGAAN VCFEGAEDLP GGKYGTSLRR GVAMDPARDV ILAYMQNGEP LAPDHGFPVR VIVPGFIGGR MVKWLRRVVV ASDESDSYYH YRDNRVLPSH
301: VDAELANAEA WWYRPEYIIN ELNINSVITT PGHDEVLPIN ALTTQRPYTI KGYAYSGGGR KVTRVEVTLD GGETWQVCSL DHPERPTKYG KYWCWCFWSV
401: DVEVLDVLGA KEIAVRAWDE AMNTQPEKLI CNLMGMMNNC WFRVKVNACR PHKGEIGLVF EHPTQPGNQP GGWMARQKHL ETSESAQGTL KKSTSTPFMN
501: TATAQYTMSE RRFARRLAMV AGGTGITPVY QVIQAVLRDQ PDDDTEMHLV YANRTVDDML LREEINRWVA AYPARLKVWY VVSKVARPED GWEYGVGRVD
601: EQVLREHLPL GDSETLALVC GPPAMIECTV RPGLEKMGYD LDRACLVF

Best Arabidopsis Sequence Match ( AT1G77760.1 )
(BLAST)

001: MATSVDNRHY PTMNGVAHAF KPPLVPSPRS FDRHRHQNQT LDVILTETKI VKETEVITTV VDSYDDSSSD DEDESHNRNV PYYKELVKKS NSDLEPSILD
101: PRDESTADSW IQRNSSMLRL TGKHPFNAEA PLPRLMHHGF ITPVPLHYVR NHGAVPKANW SDWSIEITGL VKRPAKFTME ELISEFPSRE FPVTLVCAGN
201: RRKEQNMVKQ TIGFNWGSAG VSTSLWKGIP LSEILRRCGI YSRRGGALNV CFEGAEDLPG GGGSKYGTSI KKEMAMDPAR DIILAYMQNG ELLTPDHGFP
301: VRVIVPGFIG GRMVKWLKRI IVTPQESDSY YHYKDNRVLP SLVDAELANS EAWWYKPEYI INELNINSVI TTPGHAEILP INAFTTQKPY TLKGYAYSGG
401: GKKVTRVEVT LDGGDTWSVC ELDHQEKPNK YGKFWCWCFW SLDVEVLDLL SAKDVAVRAW DESFNTQPDK LIWNLMGMMN NCWFRIRTNV CKPHRGEIGI
501: VFEHPTRPGN QSGGWMAKER QLEISSESNN TLKKSVSSPF MNTASKMYSI SEVRKHNTAD SAWIIVHGHI YDCTRFLKDH PGGTDSILIN AGTDCTEEFE
601: AIHSDKAKKL LEDYRIGELI TTGYDSSPNV SVHGASNFGP LLAPIKELTP QKNIALVNPR EKIPVRLIEK TSISHDVRKF RFALPSEDQQ LGLPVGKHVF
701: VCANINDKLC LRAYTPTSAI DAVGHIDLVV KVYFKDVHPR FPNGGLMSQH LDSLPIGSMI DIKGPLGHIE YKGKGNFLVS GKPKFAKKLA MLAGGTGITP
801: IYQIIQSILS DPEDETEMYV VYANRTEDDI LVREELEGWA SKHKERLKIW YVVEIAKEGW SYSTGFITEA VLREHIPEGL EGESLALACG PPPMIQFALQ
901: PNLEKMGYNV KEDLLIF

Arabidopsis Description

NIA1Nitrate reductase [Source:UniProtKB/TrEMBL;Acc:A0A178WBR8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.