Factsheet for GSMUA_AchrUn_randomP10080_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

mitochondrion 6
cytosol 2
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G430800.1	Wheat	mitochondrion	27.94	77.78
TraesCS6B01G208000.1	Wheat	mitochondrion	27.27	76.4
HORVU4Hr1G059580.1	Barley	cytosol	25.72	61.05
GRMZM5G861791_P01	Maize	mitochondrion, plasma membrane	74.28	59.93
BAV58139	Barley	cytosol	71.18	57.22
TraesCS6B01G232600.1	Wheat	cytosol, nucleus, plastid	68.74	55.76
HORVU0Hr1G011510.1	Barley	cytosol	69.62	54.51
ATMG00090.1	Thale cress	cytosol, mitochondrion	66.08	53.6
Solyc08g045870.2.1	Tomato	mitochondrion	13.97	49.22
CDY45492	Canola	mitochondrion, plastid	45.45	48.35
TraesCS5A01G415800.1	Wheat	cytosol	8.65	40.62
Solyc09g015850.2.1	Tomato	nucleus	33.26	38.96
Solyc12g039000.1.1	Tomato	nucleus	19.29	38.5
Solyc12g035820.1.1	Tomato	cytosol	10.64	35.82
Solyc04g049590.1.1	Tomato	extracellular	7.54	31.19
Solyc02g021370.1.1	Tomato	cytosol, mitochondrion, nucleus	26.16	29.87
Solyc03g063770.1.1	Tomato	cytosol	12.64	23.55
Solyc05g045770.1.1	Tomato	cytosol	3.33	19.74

Protein Annotations

Gene3D:3.30.1140.32	MapMan:35.1	GO:GO:0003674	GO:GO:0003735	GO:GO:0005198	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005840	GO:GO:0006412	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0019538	GO:GO:0030529	EnsemblPlantsGene:GSMUA_AchrUn_randomG10080_001
EnsemblPlants:GSMUA_AchrUn_randomP10080_001	EnsemblPlants:GSMUA_AchrUn_randomT10080_001	InterPro:IPR036419	UniProt:M0U7W8	PFAM:PF00189	ScanProsite:PS00548
PANTHER:PTHR35928	InterPro:Ribosomal_S3_C	InterPro:Ribosomal_S3_CS	InterPro:Ribosomal_S3_C_sf	SUPFAM:SSF54821	UniParc:UPI0002954780
SEG:seg	:	:	:	:	:

Description

Ribosomal protein S3, mitochondrial [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG10080_001]

Coordinates

chrchrUn_random:+:48381578..48384883

Molecular Weight (calculated)

51157.3 Da

IEP (calculated)

11.083

GRAVY (calculated)

-0.255

Length

451 amino acids

Sequence
(BLAST)

001: MARKGNPISV RLDLNRSSDP SRISFSSHGS VTIDSIYYYG KSVYQDVNLR SYFGSIRPPT IFTFGFRLGR CIILHFPKRT FMNFFLPLGP IRLLDRDKQN
101: SILIWPKKKL SYGYHDRSPS INTPISKLLR VSGAHPKYLG VVNNIALKME NDHSSRRTPL LKFFLPKKYR GPTRTLPAAA VRPSFHYLVM QYLLNTKNKM
201: HFDPVSVLNH FVAPGLAEPS TLRGSQAGSH FERRIRSRIA FLVSSFTSDR KCLGQVKRRF LHLISLANDL RFAGTTKTTI SLFPFFGATF FFPRDGVGVR
301: IPYGYNSYLN EVHKMRYNLF QRTQTNTLIE SVKIKSVCQS ASLIAQDISF QPRNNPISFR SIFSNIVKEI PLIMPKGVEG IRISCSGRLG GAEIARTECG
401: KFGKTSPNVF NQKIDYAPAE VSTRYGISGV KVRISYSMKK KGRATSETYK I

Best Arabidopsis Sequence Match ( ATMG00090.1 )
(BLAST)

001: MARKGNPISV RLGKNRSSDS SRFSEYYYGK FVYQDVNLRS YFGSIRPPTR LTFGFRLGRC IILHFPKRTF IHFFLPRRPR RLKRREKTRP GKEKGRWWTT
101: FGKAGPIECL HSSDDTEEER NEVRGRGARK RVESIRLDDR KKQNEIRGWP KKKQRYGYHD RLPSIKKNLS KSLRISGAFK HPKYAGVVND IAFLIENDDS
201: FKKTKLFKLF FQNKSRSDGP TSYLRTLPAV RPSLNFLVMQ YFFNTKNQIN FDPVVVLNHF VAPGAAEPST MGRANAQGRS LQKRIRSRIA FFVESSTSEK
301: KCLAEAKNRL THFIRLANDL RFAGTTKTTI SLFPFFGATF FFLRDGVGVY NNLDAREQLL NQLRVKCWNL VGKDKIMELI EKLKNLGGIE ELIKVIDMMI
401: EIILRKRGIP YRYNSYFYEV KKMRSFLSNR TNTKTLIESV KIKSVYQSAS PIAQDISFQL KNKRRSFHSI FAKIVKEIPK GVEGIRICFS GRLKDAAEKA
501: QTKCYKHRKT SRNVFNHKID YAPAEVSTRY GISGVKVWIS YSQKKGRRAI SETYEI

Arabidopsis Description

Rps3 [Source:UniProtKB/TrEMBL;Acc:G1C2T6]
SUBAcon: [mitochondrion,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.