Factsheet for HORVU4Hr1G059580.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G430800.1	Wheat	mitochondrion	71.58	83.95
TraesCS6B01G208000.1	Wheat	mitochondrion	68.95	81.37
Solyc12g035820.1.1	Tomato	cytosol	33.16	47.01
Solyc08g045870.2.1	Tomato	mitochondrion	30.0	44.53
Solyc04g049590.1.1	Tomato	extracellular	23.16	40.37
BAV58139	Barley	cytosol	88.95	30.12
GRMZM5G861791_P01	Maize	mitochondrion, plasma membrane	87.37	29.7
HORVU0Hr1G011510.1	Barley	cytosol	88.95	29.34
GSMUA_AchrUn_...	Banana	cytosol	61.05	25.72
ATMG00090.1	Thale cress	cytosol, mitochondrion	67.89	23.2
Solyc09g015850.2.1	Tomato	nucleus	37.89	18.7
Solyc03g063770.1.1	Tomato	cytosol	22.63	17.77
Solyc02g021370.1.1	Tomato	cytosol, mitochondrion, nucleus	36.84	17.72
CDY45492	Canola	mitochondrion, plastid	29.47	13.21
HORVU1Hr1G033320.2	Barley	cytosol	0.53	0.53
Solyc05g045770.1.1	Tomato	cytosol	0.0	0.0
Solyc12g039000.1.1	Tomato	nucleus	0.0	0.0

Protein Annotations

Gene3D:3.30.1140.32	MapMan:35.1	UniProt:A0A287P8G9	ncoils:Coil	GO:GO:0003674	GO:GO:0003735
GO:GO:0005198	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005840
GO:GO:0006412	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0019538
EnsemblPlantsGene:HORVU4Hr1G059580	EnsemblPlants:HORVU4Hr1G059580.1	InterPro:IPR036419	PFAM:PF00189	ScanProsite:PS00548	PANTHER:PTHR35928
InterPro:Ribosomal_S3_C	InterPro:Ribosomal_S3_CS	InterPro:Ribosomal_S3_C_sf	SUPFAM:SSF54821	UniParc:UPI000B46ED52	SEG:seg

Description

No Description!

Coordinates

chrchr4H:+:497504653..497508081

Molecular Weight (calculated)

19110.7 Da

IEP (calculated)

10.346

GRAVY (calculated)

-0.076

Length

190 amino acids

Sequence
(BLAST)

001: MGKDKVMELI EKFIDLGRIG KLIKGIEMMI EIILRKRIIP YGYNSYLNEV QKMRSFLSNR TNTNTLIESV KIKSVYRSAS LIAQDISFQL RNNPISFRSI
101: FSKIVKDIPL IMPKGVEGIR ICCSGRLGGA EIARTECGKY GKTSCNVFNH KIDYAPAEVS TRNGISGVKV XXXXXXXXXX XXXXXXXXXX

Best Arabidopsis Sequence Match ( ATMG00090.1 )
(BLAST)

001: MARKGNPISV RLGKNRSSDS SRFSEYYYGK FVYQDVNLRS YFGSIRPPTR LTFGFRLGRC IILHFPKRTF IHFFLPRRPR RLKRREKTRP GKEKGRWWTT
101: FGKAGPIECL HSSDDTEEER NEVRGRGARK RVESIRLDDR KKQNEIRGWP KKKQRYGYHD RLPSIKKNLS KSLRISGAFK HPKYAGVVND IAFLIENDDS
201: FKKTKLFKLF FQNKSRSDGP TSYLRTLPAV RPSLNFLVMQ YFFNTKNQIN FDPVVVLNHF VAPGAAEPST MGRANAQGRS LQKRIRSRIA FFVESSTSEK
301: KCLAEAKNRL THFIRLANDL RFAGTTKTTI SLFPFFGATF FFLRDGVGVY NNLDAREQLL NQLRVKCWNL VGKDKIMELI EKLKNLGGIE ELIKVIDMMI
401: EIILRKRGIP YRYNSYFYEV KKMRSFLSNR TNTKTLIESV KIKSVYQSAS PIAQDISFQL KNKRRSFHSI FAKIVKEIPK GVEGIRICFS GRLKDAAEKA
501: QTKCYKHRKT SRNVFNHKID YAPAEVSTRY GISGVKVWIS YSQKKGRRAI SETYEI

Arabidopsis Description

Rps3 [Source:UniProtKB/TrEMBL;Acc:G1C2T6]
SUBAcon: [mitochondrion,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.