Factsheet for Solyc03g063770.1.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

mitochondrion 4
cytosol 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
BaCelLo:	mitochondrion
EpiLoc:	mitochondrion
MultiLoc:	cytosol
Plant-mPloc:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc12g035820.1.1	Tomato	cytosol	26.86	48.51
Solyc05g045910.1.1	Tomato	mitochondrion	21.49	37.96
Solyc11g056400.1.1	Tomato	cytosol, nucleus	48.76	36.09
Solyc09g015850.2.1	Tomato	nucleus	55.79	35.06
Solyc12g039000.1.1	Tomato	nucleus	23.55	25.22
GRMZM5G861791_P01	Maize	mitochondrion, plasma membrane	54.96	23.79
HORVU4Hr1G059580.1	Barley	cytosol	17.77	22.63
CDY45492	Canola	mitochondrion, plastid	38.84	22.17
Solyc05g045830.1.1	Tomato	cytosol, nucleus, peroxisome	32.23	21.14
Solyc04g049590.1.1	Tomato	extracellular	9.5	21.1
BAV58139	Barley	cytosol	48.35	20.86
ATMG00090.1	Thale cress	cytosol, mitochondrion	47.52	20.68
TraesCS6B01G232600.1	Wheat	cytosol, nucleus, plastid	46.69	20.32
HORVU0Hr1G011510.1	Barley	cytosol	48.35	20.31
Solyc02g021370.1.1	Tomato	cytosol, mitochondrion, nucleus	28.1	17.22
TraesCS3B01G430800.1	Wheat	mitochondrion	9.5	14.2
GSMUA_AchrUn_...	Banana	cytosol	23.55	12.64
TraesCS6B01G208000.1	Wheat	mitochondrion	7.44	11.18
Solyc08g045870.2.1	Tomato	mitochondrion	4.55	8.59
Solyc05g045770.1.1	Tomato	cytosol	0.41	1.32

Protein Annotations

MapMan:17.7.1.1.14	Gene3D:3.90.1170.10	GO:GO:0003674	GO:GO:0003676	GO:GO:0003723	GO:GO:0003735
GO:GO:0005198	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005840	GO:GO:0006412	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0019538	GO:GO:0019843	InterPro:IPR036920	UniProt:K4BHB7	PFAM:PF00252	PRINTS:PR00060
PANTHER:PTHR35928	InterPro:Ribosomal_L10e/L16	InterPro:Ribosomal_L10e/L16_sf	InterPro:Ribosomal_L16	EnsemblPlantsGene:Solyc03g063770.1	EnsemblPlants:Solyc03g063770.1.1
UniParc:UPI0002767820	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr3:+:36146938..36148845

Molecular Weight (calculated)

27958.4 Da

IEP (calculated)

10.836

GRAVY (calculated)

-0.381

Length

242 amino acids

Sequence
(BLAST)

001: MQNEISIWPK NNQGYGYHDR SPSIKKNIFK SLHVSGAFKH SKYPGIENDI AFLIENDDSF RKTKLFFFFP KKSRSDRPTC HLLKRTLPAV RPSLNYSVMQ
101: YLLNTKKKIH YDPVVVLKKF VALSVAHPST MGGANGAREQ LLGQLRRKCW NLMGKDKVMA LIEKFIDVNR IGELIRGIKM MIEIILRNRR ISYWGCKLDD
201: TQLGFGRYGT KSCRAGCLSY RAIEAARRAI IGHFHRAMSR QF

Best Arabidopsis Sequence Match ( ATMG00090.1 )
(BLAST)

001: MARKGNPISV RLGKNRSSDS SRFSEYYYGK FVYQDVNLRS YFGSIRPPTR LTFGFRLGRC IILHFPKRTF IHFFLPRRPR RLKRREKTRP GKEKGRWWTT
101: FGKAGPIECL HSSDDTEEER NEVRGRGARK RVESIRLDDR KKQNEIRGWP KKKQRYGYHD RLPSIKKNLS KSLRISGAFK HPKYAGVVND IAFLIENDDS
201: FKKTKLFKLF FQNKSRSDGP TSYLRTLPAV RPSLNFLVMQ YFFNTKNQIN FDPVVVLNHF VAPGAAEPST MGRANAQGRS LQKRIRSRIA FFVESSTSEK
301: KCLAEAKNRL THFIRLANDL RFAGTTKTTI SLFPFFGATF FFLRDGVGVY NNLDAREQLL NQLRVKCWNL VGKDKIMELI EKLKNLGGIE ELIKVIDMMI
401: EIILRKRGIP YRYNSYFYEV KKMRSFLSNR TNTKTLIESV KIKSVYQSAS PIAQDISFQL KNKRRSFHSI FAKIVKEIPK GVEGIRICFS GRLKDAAEKA
501: QTKCYKHRKT SRNVFNHKID YAPAEVSTRY GISGVKVWIS YSQKKGRRAI SETYEI

Arabidopsis Description

Rps3 [Source:UniProtKB/TrEMBL;Acc:G1C2T6]
SUBAcon: [cytosol,mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.