Factsheet for Solyc08g045870.2.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 7
cytosol 1
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G430800.1	Wheat	mitochondrion	43.75	34.57
TraesCS6B01G208000.1	Wheat	mitochondrion	42.97	34.16
HORVU4Hr1G059580.1	Barley	cytosol	44.53	30.0
GSMUA_AchrUn_...	Banana	cytosol	49.22	13.97
Solyc12g035820.1.1	Tomato	cytosol	14.06	13.43
Solyc02g021370.1.1	Tomato	cytosol, mitochondrion, nucleus	40.62	13.16
GRMZM5G861791_P01	Maize	mitochondrion, plasma membrane	50.78	11.63
BAV58139	Barley	cytosol	50.78	11.59
TraesCS6B01G232600.1	Wheat	cytosol, nucleus, plastid	50.0	11.51
HORVU0Hr1G011510.1	Barley	cytosol	50.78	11.28
ATMG00090.1	Thale cress	cytosol, mitochondrion	45.31	10.43
Solyc04g049590.1.1	Tomato	extracellular	8.59	10.09
Solyc09g015850.2.1	Tomato	nucleus	24.22	8.05
Solyc05g045910.1.1	Tomato	mitochondrion	5.47	5.11
Solyc03g063770.1.1	Tomato	cytosol	8.59	4.55
CDY45492	Canola	mitochondrion, plastid	11.72	3.54
Solyc05g045830.1.1	Tomato	cytosol, nucleus, peroxisome	10.16	3.52
Solyc11g056400.1.1	Tomato	cytosol, nucleus	5.47	2.14
Solyc12g039000.1.1	Tomato	nucleus	2.34	1.33
Solyc05g045770.1.1	Tomato	cytosol	0.0	0.0

Protein Annotations

Gene3D:3.30.1140.32	MapMan:35.1	GO:GO:0003674	GO:GO:0003735	GO:GO:0005198	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005840	GO:GO:0006412	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0019538	InterPro:IPR036419	UniProt:K4CKE1
PANTHER:PTHR35928	InterPro:Ribosomal_S3_C_sf	SUPFAM:SSF54821	EnsemblPlantsGene:Solyc08g045870.2	EnsemblPlants:Solyc08g045870.2.1	UniParc:UPI000276C655

Description

No Description!

Coordinates

chr8:+:15844549..15845431

Molecular Weight (calculated)

14716.1 Da

IEP (calculated)

9.972

GRAVY (calculated)

-0.179

Length

128 amino acids

Sequence
(BLAST)

001: MVPRGCLAKI FNPNLRIYSL LQDEPRLRYS KNIAIEELWL SCFAYYTVLP EGGMLQERRT NTNTLIESVK IKSVYQSASP ISQDISFQPR NKTRSFRSIF
101: SQIVKDIPLV MKKGVEGIHI CCSGRLCR

Best Arabidopsis Sequence Match ( ATMG00090.1 )
(BLAST)

001: MARKGNPISV RLGKNRSSDS SRFSEYYYGK FVYQDVNLRS YFGSIRPPTR LTFGFRLGRC IILHFPKRTF IHFFLPRRPR RLKRREKTRP GKEKGRWWTT
101: FGKAGPIECL HSSDDTEEER NEVRGRGARK RVESIRLDDR KKQNEIRGWP KKKQRYGYHD RLPSIKKNLS KSLRISGAFK HPKYAGVVND IAFLIENDDS
201: FKKTKLFKLF FQNKSRSDGP TSYLRTLPAV RPSLNFLVMQ YFFNTKNQIN FDPVVVLNHF VAPGAAEPST MGRANAQGRS LQKRIRSRIA FFVESSTSEK
301: KCLAEAKNRL THFIRLANDL RFAGTTKTTI SLFPFFGATF FFLRDGVGVY NNLDAREQLL NQLRVKCWNL VGKDKIMELI EKLKNLGGIE ELIKVIDMMI
401: EIILRKRGIP YRYNSYFYEV KKMRSFLSNR TNTKTLIESV KIKSVYQSAS PIAQDISFQL KNKRRSFHSI FAKIVKEIPK GVEGIRICFS GRLKDAAEKA
501: QTKCYKHRKT SRNVFNHKID YAPAEVSTRY GISGVKVWIS YSQKKGRRAI SETYEI

Arabidopsis Description

Rps3 [Source:UniProtKB/TrEMBL;Acc:G1C2T6]
SUBAcon: [cytosol,mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.