Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- nucleus 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| BAV58139 | Barley | cytosol | 95.68 | 94.83 |
| TraesCS3B01G430800.1 | Wheat | mitochondrion | 26.98 | 92.59 |
| TraesCS6B01G208000.1 | Wheat | mitochondrion | 26.08 | 90.06 |
| HORVU0Hr1G011510.1 | Barley | cytosol | 92.27 | 89.06 |
| GRMZM5G861791_P01 | Maize | mitochondrion, plasma membrane | 89.21 | 88.73 |
| ATMG00090.1 | Thale cress | cytosol, mitochondrion | 73.92 | 73.92 |
| CDY45492 | Canola | mitochondrion, plastid | 55.58 | 72.88 |
| Solyc09g015850.2.1 | Tomato | nucleus | 49.82 | 71.95 |
| GSMUA_AchrUn_... | Banana | cytosol | 55.76 | 68.74 |
| Solyc12g035820.1.1 | Tomato | cytosol | 16.37 | 67.91 |
| Solyc12g039000.1.1 | Tomato | nucleus | 24.1 | 59.29 |
| Solyc05g045770.1.1 | Tomato | cytosol | 7.55 | 55.26 |
| Solyc08g045870.2.1 | Tomato | mitochondrion | 11.51 | 50.0 |
| Solyc03g063770.1.1 | Tomato | cytosol | 20.32 | 46.69 |
| Solyc04g049590.1.1 | Tomato | extracellular | 8.63 | 44.04 |
| TraesCS5A01G415800.1 | Wheat | cytosol | 6.47 | 37.5 |
| Solyc02g021370.1.1 | Tomato | cytosol, mitochondrion, nucleus | 23.38 | 32.91 |
Protein Annotations
| MapMan:17.7.1.2.2 | Gene3D:3.30.1140.32 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 | GO:GO:0003735 |
| GO:GO:0005198 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005840 | GO:GO:0006412 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0019538 | InterPro:IPR036419 | InterPro:KH_sf_prok-type | PFAM:PF00189 | ScanProsite:PS00548 | PANTHER:PTHR35928 |
| InterPro:Ribosomal_S3_C | InterPro:Ribosomal_S3_CS | InterPro:Ribosomal_S3_C_sf | SUPFAM:SSF54814 | SUPFAM:SSF54821 | EnsemblPlantsGene:TraesCS6B01G232600 |
| EnsemblPlants:TraesCS6B01G232600.1 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr6B:+:388134472..388137887
Molecular Weight (calculated)
63350.2 Da
IEP (calculated)
10.800
GRAVY (calculated)
-0.440
Length
556 amino acids
Sequence
(BLAST)
(BLAST)
001: MARKGNPISV RLDLNHSSDP SRFSDYYYGK SLYQDVNLRS YFSSIRPPTK LALGFRLGRC IILHFPKRTF IHLFLPGRSP RLKQKQDKKS SPEKGWWPTF
101: GKVGPIGCLH SGDGTEEERN EVRGRGAGKR VESIDQEKQN EIRIWPKKMQ RYGYHDRSPS RKKNFDKSLR VSGAFKRPQY AGVVNDIPFL MGNAASLLKR
201: NRIKLFLPKK SHSDDSTSHL LKRTLPAVRS SLNYSVMQYF FNTKNKMHFD PVLVLNHFVA PGVAEPSTMG GAKGGSLDKR IRSCIFFLES STNKKKCLAR
301: AKKRLIHFIR QANDLRFAGT TKTTISLFPF FGATFFFPRD GVGVYNNPFE YARKQLLAQF RIKCRNLMGK DKVMELIEKF IDLGRIGKLI KGIEMMIEII
401: LRKRIIPYGY NSYLNEVQKM RSFLSNRTNA NTLIESVKIK SVYQSASLIA QDISFQLRNN PISFHSIFSK IVKDIPLIMP KGVEGIHICC SGRLGGADIA
501: RTECGKYGKT SCNVFNQKID YAPLEVSTRN GISGVKVRIS YSQNKKGRAI SETYEI
101: GKVGPIGCLH SGDGTEEERN EVRGRGAGKR VESIDQEKQN EIRIWPKKMQ RYGYHDRSPS RKKNFDKSLR VSGAFKRPQY AGVVNDIPFL MGNAASLLKR
201: NRIKLFLPKK SHSDDSTSHL LKRTLPAVRS SLNYSVMQYF FNTKNKMHFD PVLVLNHFVA PGVAEPSTMG GAKGGSLDKR IRSCIFFLES STNKKKCLAR
301: AKKRLIHFIR QANDLRFAGT TKTTISLFPF FGATFFFPRD GVGVYNNPFE YARKQLLAQF RIKCRNLMGK DKVMELIEKF IDLGRIGKLI KGIEMMIEII
401: LRKRIIPYGY NSYLNEVQKM RSFLSNRTNA NTLIESVKIK SVYQSASLIA QDISFQLRNN PISFHSIFSK IVKDIPLIMP KGVEGIHICC SGRLGGADIA
501: RTECGKYGKT SCNVFNQKID YAPLEVSTRN GISGVKVRIS YSQNKKGRAI SETYEI
001: MARKGNPISV RLGKNRSSDS SRFSEYYYGK FVYQDVNLRS YFGSIRPPTR LTFGFRLGRC IILHFPKRTF IHFFLPRRPR RLKRREKTRP GKEKGRWWTT
101: FGKAGPIECL HSSDDTEEER NEVRGRGARK RVESIRLDDR KKQNEIRGWP KKKQRYGYHD RLPSIKKNLS KSLRISGAFK HPKYAGVVND IAFLIENDDS
201: FKKTKLFKLF FQNKSRSDGP TSYLRTLPAV RPSLNFLVMQ YFFNTKNQIN FDPVVVLNHF VAPGAAEPST MGRANAQGRS LQKRIRSRIA FFVESSTSEK
301: KCLAEAKNRL THFIRLANDL RFAGTTKTTI SLFPFFGATF FFLRDGVGVY NNLDAREQLL NQLRVKCWNL VGKDKIMELI EKLKNLGGIE ELIKVIDMMI
401: EIILRKRGIP YRYNSYFYEV KKMRSFLSNR TNTKTLIESV KIKSVYQSAS PIAQDISFQL KNKRRSFHSI FAKIVKEIPK GVEGIRICFS GRLKDAAEKA
501: QTKCYKHRKT SRNVFNHKID YAPAEVSTRY GISGVKVWIS YSQKKGRRAI SETYEI
101: FGKAGPIECL HSSDDTEEER NEVRGRGARK RVESIRLDDR KKQNEIRGWP KKKQRYGYHD RLPSIKKNLS KSLRISGAFK HPKYAGVVND IAFLIENDDS
201: FKKTKLFKLF FQNKSRSDGP TSYLRTLPAV RPSLNFLVMQ YFFNTKNQIN FDPVVVLNHF VAPGAAEPST MGRANAQGRS LQKRIRSRIA FFVESSTSEK
301: KCLAEAKNRL THFIRLANDL RFAGTTKTTI SLFPFFGATF FFLRDGVGVY NNLDAREQLL NQLRVKCWNL VGKDKIMELI EKLKNLGGIE ELIKVIDMMI
401: EIILRKRGIP YRYNSYFYEV KKMRSFLSNR TNTKTLIESV KIKSVYQSAS PIAQDISFQL KNKRRSFHSI FAKIVKEIPK GVEGIRICFS GRLKDAAEKA
501: QTKCYKHRKT SRNVFNHKID YAPAEVSTRY GISGVKVWIS YSQKKGRRAI SETYEI
Arabidopsis Description
Rps3 [Source:UniProtKB/TrEMBL;Acc:G1C2T6]
SUBAcon: [mitochondrion,cytosol]
SUBAcon: [mitochondrion,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.