Factsheet for TraesCS3B01G430800.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
cytosol 1
mitochondrion 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion, plastid
iPSORT:	plastid
MultiLoc:	cytosol
Predotar:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G208000.1	Wheat	mitochondrion	89.51	90.06
HORVU4Hr1G059580.1	Barley	cytosol	83.95	71.58
Solyc08g045870.2.1	Tomato	mitochondrion	34.57	43.75
Solyc04g049590.1.1	Tomato	extracellular	23.46	34.86
Solyc12g035820.1.1	Tomato	cytosol	25.31	30.6
GSMUA_AchrUn_...	Banana	cytosol	77.78	27.94
GRMZM5G861791_P01	Maize	mitochondrion, plasma membrane	93.83	27.19
TraesCS6B01G232600.1	Wheat	cytosol, nucleus, plastid	92.59	26.98
ATMG00090.1	Thale cress	cytosol, mitochondrion	75.93	22.12
Solyc02g021370.1.1	Tomato	cytosol, mitochondrion, nucleus	44.44	18.23
Solyc09g015850.2.1	Tomato	nucleus	30.86	12.99
Solyc03g063770.1.1	Tomato	cytosol	14.2	9.5
CDY45492	Canola	mitochondrion, plastid	22.22	8.49
Solyc05g045770.1.1	Tomato	cytosol	0.0	0.0
Solyc12g039000.1.1	Tomato	nucleus	0.0	0.0
TraesCS5A01G415800.1	Wheat	cytosol	0.0	0.0

Protein Annotations

Gene3D:3.30.1140.32	MapMan:35.1	GO:GO:0003674	GO:GO:0003735	GO:GO:0005198	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005840	GO:GO:0006412	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0015935	GO:GO:0019538	InterPro:IPR036419
PFAM:PF00189	PANTHER:PTHR11760	PANTHER:PTHR11760:SF19	InterPro:Ribosomal_S3_C	InterPro:Ribosomal_S3_C_sf	InterPro:Ribosomal_S3_bac
SUPFAM:SSF54821	EnsemblPlantsGene:TraesCS3B01G430800	EnsemblPlants:TraesCS3B01G430800.1	:	:	:

Description

No Description!

Coordinates

chr3B:+:669905714..669906202

Molecular Weight (calculated)

18385.4 Da

IEP (calculated)

10.398

GRAVY (calculated)

-0.288

Length

162 amino acids

Sequence
(BLAST)

001: MMIEIILRKR IILYGYNSYL NEVQKMRSFL SNRTNTNTLI ESVKIKSVYQ SASLIAQDIS FQLRHNPISF RSIFSKIVKD IPLIMPKGVE GIRICYSGRL
101: GDAEIARTEC GKYGKTSCNV FNQKNDYAPA EVSTRNGISG VKVRISYSQN KKGRAISESY KI

Best Arabidopsis Sequence Match ( ATMG00090.1 )
(BLAST)

001: MARKGNPISV RLGKNRSSDS SRFSEYYYGK FVYQDVNLRS YFGSIRPPTR LTFGFRLGRC IILHFPKRTF IHFFLPRRPR RLKRREKTRP GKEKGRWWTT
101: FGKAGPIECL HSSDDTEEER NEVRGRGARK RVESIRLDDR KKQNEIRGWP KKKQRYGYHD RLPSIKKNLS KSLRISGAFK HPKYAGVVND IAFLIENDDS
201: FKKTKLFKLF FQNKSRSDGP TSYLRTLPAV RPSLNFLVMQ YFFNTKNQIN FDPVVVLNHF VAPGAAEPST MGRANAQGRS LQKRIRSRIA FFVESSTSEK
301: KCLAEAKNRL THFIRLANDL RFAGTTKTTI SLFPFFGATF FFLRDGVGVY NNLDAREQLL NQLRVKCWNL VGKDKIMELI EKLKNLGGIE ELIKVIDMMI
401: EIILRKRGIP YRYNSYFYEV KKMRSFLSNR TNTKTLIESV KIKSVYQSAS PIAQDISFQL KNKRRSFHSI FAKIVKEIPK GVEGIRICFS GRLKDAAEKA
501: QTKCYKHRKT SRNVFNHKID YAPAEVSTRY GISGVKVWIS YSQKKGRRAI SETYEI

Arabidopsis Description

Rps3 [Source:UniProtKB/TrEMBL;Acc:G1C2T6]
SUBAcon: [mitochondrion,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.