Factsheet for TraesCS6B01G208000.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
cytosol 1
mitochondrion 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion, plastid
iPSORT:	plastid
MultiLoc:	cytosol
Predotar:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G430800.1	Wheat	mitochondrion	90.06	89.51
HORVU4Hr1G059580.1	Barley	cytosol	81.37	68.95
Solyc08g045870.2.1	Tomato	mitochondrion	34.16	42.97
Solyc04g049590.1.1	Tomato	extracellular	20.5	30.28
GSMUA_AchrUn_...	Banana	cytosol	76.4	27.27
GRMZM5G861791_P01	Maize	mitochondrion, plasma membrane	91.3	26.3
Solyc12g035820.1.1	Tomato	cytosol	21.74	26.12
TraesCS6B01G232600.1	Wheat	cytosol, nucleus, plastid	90.06	26.08
ATMG00090.1	Thale cress	cytosol, mitochondrion	72.05	20.86
Solyc02g021370.1.1	Tomato	cytosol, mitochondrion, nucleus	45.34	18.48
Solyc09g015850.2.1	Tomato	nucleus	27.33	11.43
Solyc03g063770.1.1	Tomato	cytosol	11.18	7.44
CDY45492	Canola	mitochondrion, plastid	19.25	7.31
Solyc05g045770.1.1	Tomato	cytosol	0.0	0.0
Solyc12g039000.1.1	Tomato	nucleus	0.0	0.0
TraesCS5A01G415800.1	Wheat	cytosol	0.0	0.0

Protein Annotations

Gene3D:3.30.1140.32	MapMan:35.1	GO:GO:0003674	GO:GO:0003735	GO:GO:0005198	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005840	GO:GO:0006412	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0015935	GO:GO:0019538	InterPro:IPR036419
PFAM:PF00189	ScanProsite:PS00548	PANTHER:PTHR11760	PANTHER:PTHR11760:SF19	InterPro:Ribosomal_S3_C	InterPro:Ribosomal_S3_CS
InterPro:Ribosomal_S3_C_sf	InterPro:Ribosomal_S3_bac	SUPFAM:SSF54821	EnsemblPlantsGene:TraesCS6B01G208000	EnsemblPlants:TraesCS6B01G208000.1	:

Description

No Description!

Coordinates

chr6B:-:264978667..264979152

Molecular Weight (calculated)

18253.2 Da

IEP (calculated)

10.258

GRAVY (calculated)

-0.222

Length

161 amino acids

Sequence
(BLAST)

001: MVEIIPRKRI IPYGYNSYLN KVQKMRSFFS HRTNTNTLIE SVKIKYVYQS ASLIAQDISF QLRNNPISFR SIFSKIVKDI PLIMPKGVEG IRICYSARLG
101: GAEIARTECG KYGKTSCNVF NQKIDYAPAE VSTHNGISGV KVRISYSQNK KGLVISETYE I

Best Arabidopsis Sequence Match ( ATMG00090.1 )
(BLAST)

001: MARKGNPISV RLGKNRSSDS SRFSEYYYGK FVYQDVNLRS YFGSIRPPTR LTFGFRLGRC IILHFPKRTF IHFFLPRRPR RLKRREKTRP GKEKGRWWTT
101: FGKAGPIECL HSSDDTEEER NEVRGRGARK RVESIRLDDR KKQNEIRGWP KKKQRYGYHD RLPSIKKNLS KSLRISGAFK HPKYAGVVND IAFLIENDDS
201: FKKTKLFKLF FQNKSRSDGP TSYLRTLPAV RPSLNFLVMQ YFFNTKNQIN FDPVVVLNHF VAPGAAEPST MGRANAQGRS LQKRIRSRIA FFVESSTSEK
301: KCLAEAKNRL THFIRLANDL RFAGTTKTTI SLFPFFGATF FFLRDGVGVY NNLDAREQLL NQLRVKCWNL VGKDKIMELI EKLKNLGGIE ELIKVIDMMI
401: EIILRKRGIP YRYNSYFYEV KKMRSFLSNR TNTKTLIESV KIKSVYQSAS PIAQDISFQL KNKRRSFHSI FAKIVKEIPK GVEGIRICFS GRLKDAAEKA
501: QTKCYKHRKT SRNVFNHKID YAPAEVSTRY GISGVKVWIS YSQKKGRRAI SETYEI

Arabidopsis Description

Rps3 [Source:UniProtKB/TrEMBL;Acc:G1C2T6]
SUBAcon: [mitochondrion,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.