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Banana
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Banana
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • vacuole 1
  • plastid 1
  • cytosol 2
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus, plastid, vacuole
BaCelLo:nucleus
EpiLoc:vacuole
iPSORT:plastid
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
GSMUA_Achr9P09250_001

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT4G11850.1 GSMUA_Achr9P09250_001 AT4G26630.1 25387881
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
GSMUA_Achr8P12030_001 Banana plastid 68.0 84.33
PGSC0003DMT400000378 Potato cytosol 19.76 75.19
TraesCS1B01G195200.1 Wheat cytosol 60.58 74.57
TraesCS1D01G189300.1 Wheat cytosol 60.28 74.2
PGSC0003DMT400026602 Potato cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, vacuole 22.57 73.53
GSMUA_Achr4P24890_001 Banana cytosol, plastid 64.39 72.54
CDY41006 Canola mitochondrion 11.33 72.44
TraesCS1D01G370600.1 Wheat cytosol 58.58 70.53
TraesCS1B01G382600.1 Wheat mitochondrion 58.38 70.29
TraesCS1A01G365100.2 Wheat mitochondrion 58.17 70.05
CDY13283 Canola mitochondrion 24.57 69.41
HORVU1Hr1G079150.1 Barley cytosol 57.37 69.08
KRG89825 Soybean cytoskeleton, cytosol, peroxisome 20.16 69.07
VIT_02s0025g04620.t01 Wine grape cytosol 58.88 69.06
Bra022740.1-P Field mustard cytosol, extracellular 8.73 69.05
CDY28756 Canola cytosol, extracellular 8.73 69.05
Os03t0119100-01 Rice plasma membrane 57.57 68.74
KXG40331 Sorghum cytosol 56.47 68.16
Bra000752.1-P Field mustard cytosol, nucleus, peroxisome 35.51 67.3
Zm00001d027386_P002 Maize cytosol 56.27 67.27
Solyc08g080130.2.1 Tomato nucleus 56.97 67.14
PGSC0003DMT400058531 Potato plastid 56.87 66.78
HORVU4Hr1G085550.2 Barley cytosol 55.37 66.43
TraesCS4D01G346700.1 Wheat cytosol 55.07 66.06
TraesCS5A01G520900.1 Wheat cytosol 54.96 65.94
CDX86742 Canola cytosol 55.87 65.76
Solyc01g091910.2.1 Tomato plastid 58.98 65.7
Bra014871.1-P Field mustard cytosol 55.77 65.64
AT4G11850.1 Thale cress cytosol 56.17 65.27
Zm00001d050470_P001 Maize mitochondrion 25.98 65.08
KRH77467 Soybean nucleus 55.67 65.06
AT4G00240.1 Thale cress cytosol 60.28 64.83
CDX90066 Canola cytosol 62.99 64.48
AT4G11840.1 Thale cress cytosol 55.77 64.2
Zm00001d029684_P001 Maize peroxisome 67.2 63.93
EER92041 Sorghum cytosol, nucleus, peroxisome 67.4 63.82
TraesCS4B01G352300.1 Wheat cytosol 54.76 63.71
CDY64184 Canola mitochondrion 52.06 63.68
AT4G11830.2 Thale cress cytosol 54.56 63.55
Os10t0524400-01 Rice plasma membrane 66.4 63.29
CDX90807 Canola cytosol 50.95 62.95
CDY52961 Canola cytosol, nucleus, peroxisome 61.69 62.0
KRH77469 Soybean nucleus 4.31 61.43
CDY54926 Canola cytosol, nucleus, peroxisome 61.79 61.42
KRH65182 Soybean cytosol 46.44 61.0
KRG93706 Soybean nucleus 17.65 60.48
CDY15144 Canola peroxisome 64.29 60.24
Bra033225.1-P Field mustard cytosol 64.49 60.09
TraesCS1A01G187400.1 Wheat peroxisome 66.7 60.07
HORVU1Hr1G048970.1 Barley cytosol, nucleus, peroxisome 66.7 59.96
Bra000753.1-P Field mustard cytosol 47.74 59.95
CDY13284 Canola cytosol 27.58 59.91
KRH48290 Soybean nucleus 62.89 59.89
CDX90808 Canola cytosol 47.54 59.7
Zm00001d015818_P002 Maize cytosol, nucleus, peroxisome 16.55 59.57
VIT_15s0048g01160.t01 Wine grape cytosol 64.39 59.06
KRH01625 Soybean cytosol 64.39 58.52
AT2G42010.2 Thale cress peroxisome 64.59 58.12
KRH70487 Soybean cytosol 64.19 57.87
KRH77470 Soybean cytosol 7.82 56.93
Zm00001d015256_P001 Maize cytosol 23.47 56.52
GSMUA_Achr7P23470_001 Banana cytosol 44.03 55.78
GSMUA_Achr9P21120_001 Banana nucleus 13.84 54.76
Solyc10g017650.1.1 Tomato cytosol 60.48 53.89
GSMUA_Achr1P14920_001 Banana plastid 42.63 53.53
GSMUA_Achr1P07360_001 Banana cytosol 38.92 53.01
GSMUA_AchrUn_... Banana cytosol 44.73 51.98
GSMUA_Achr10P... Banana cytosol, nucleus, peroxisome 8.93 51.45
GSMUA_Achr11P... Banana cytosol 41.62 49.88
CDY46254 Canola cytosol 4.71 48.45
GSMUA_Achr9P21110_001 Banana mitochondrion 30.59 48.41
GSMUA_Achr7P10170_001 Banana cytosol 24.57 45.37
GSMUA_Achr1P14590_001 Banana cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole 24.47 43.73
GSMUA_Achr10P... Banana cytosol 13.24 43.28
Bra008515.1-P Field mustard mitochondrion, plastid 61.99 42.62
GSMUA_Achr10P... Banana cytosol, nucleus, peroxisome 16.95 42.36
GSMUA_Achr10P... Banana cytosol, plastid 17.35 37.86
GSMUA_Achr6P35870_001 Banana plasma membrane 25.38 26.6
GSMUA_Achr2P00290_001 Banana endoplasmic reticulum 8.73 23.26
GSMUA_Achr9P16530_001 Banana cytosol, nucleus, peroxisome 16.75 15.8
GSMUA_Achr2P00270_001 Banana cytosol, nucleus, peroxisome 10.23 12.56
GSMUA_Achr11P... Banana mitochondrion 2.21 12.5
GSMUA_Achr11P... Banana cytosol 1.81 7.56
Protein Annotations
KEGG:00564+3.1.4.4KEGG:00565+3.1.4.4Gene3D:2.60.40.150Gene3D:3.30.870.10MapMan:5.7.2.4.2InterPro:C2_dom
InterPro:C2_domain_sfGO:GO:0003674GO:GO:0003824EnsemblPlantsGene:GSMUA_Achr5G20150_001EnsemblPlants:GSMUA_Achr5P20150_001EnsemblPlants:GSMUA_Achr5T20150_001
InterPro:IPR000008InterPro:IPR001736InterPro:IPR035892UniProt:M0T044PFAM:PF00168PFAM:PF00614
PFAM:PF12357PFAM:PF13091InterPro:PLD-like_domInterPro:PLipase_D/transphosphatidylaseInterPro:PLipase_D_CInterPro:PLipase_D_fam
PFscan:PS50004PFscan:PS50035PANTHER:PTHR18896PANTHER:PTHR18896:SF65SMART:SM00155SMART:SM00239
SUPFAM:SSF49562SUPFAM:SSF56024UniParc:UPI0002959B9CSEG:seg::
Description
Phospholipase D beta 1 [Source:GMGC_GENE;Acc:GSMUA_Achr5G20150_001]
Coordinates
chr5:-:21880074..21891020
Molecular Weight (calculated)
111957.0 Da
IEP (calculated)
7.392
GRAVY (calculated)
-0.435
Length
997 amino acids
Sequence
(BLAST)
001: MDNPYQYPHP YGYQNPPPSA LANPSPYEAP HQSPHPPYLY TYNSFPSPPP PNPSLQFTRS GPIQYPPPPS YHPPAAPFVA PTNYSYDPYS FPPRNPHPYI
101: YPYTIPYEPA KYDVISAQLP VSSSSSSSIY PINNHLANGR LADQTLSPDS SHHRSAIHDY QRQSFSGSLS SVTPFATPPA TPSRESQHGA IVPFAGSPSS
201: RGRASLKVLL LHGSLDIWAY EAKNLPNMDL FHKTLGDMFG PRITGTISGK VEHVTSITSD PYVTINVCDA AIGRTYVVSN SENPVWMQHF NVPVAHHAAE
301: VEFLVKDSDV LGAQLIGSVS IPTMQIYSGE KVEGTYPILL SIYHHGVGAG PDHCGVPGTY FPLRKGGKVT LYQDAHVPDG YLPDLMLGNG MYYEHGKCWH
401: DICDSIINAR RLIYIIGWSV FHTVRLVRDS GNSSSPILGD LLKSKSQEGV RVLLLVWDDP TSRNILGYRT DGVMGTRDEE TRRFFKHSSV QVLLCPRSAG
501: KRHSFVKQQE TGTIYTHHQK QVVVDADAGN NTRKIIAFVG GLDLCGGRYD NPKHPLFRTL QTLHKDDYHN PNFVNYDDSG PREPWHDLHS RIDGPAAYDV
601: LKNFEERWLK ASKHHGIKKL KKSSDDALLH IERIPDIIGV NNSLYMNDND PETWHVQIFR SIDSNSVKGF PKDPRDATNK NLICGKNVLI DMSIHRAYVH
701: AIRAAQHFIY IENQYFLGSS FNWDSNKNLG ANNLIPIEIA LKIANKIKAN ERFSAYIVIP MWPEGNPTGA PTQRILFWQN KTMQMMYETI YTALKEVGLE
801: NIYEPQDYLN FFCLGNREAS DLNSASQNAE ICPQALAKKN RRFMIYVHSK GMIVDDEFVI MGSANINQRS LEGTRDTEIA MGAYQPQHTW ARKLSGPRGQ
901: IFGYRMSLWA EHIGTVEECF TSPHSLECMR RVRDLGLLNW KQFVADDITE MRGHLLKYPV DVDKKGMVKP LPGFETFPDI GGNICGSFFG IQENLTI
Best Arabidopsis Sequence Match ( AT2G42010.2 )
(BLAST)
0001: MDNHGPRYPY PYGQYPYPYP YPAPYRPPSS EPYPPPPTNQ YSAPYYPYPP PPYATPPPYA SPPPPHQHTS GSHSGPLDYS HNPQPSSLAA APPEYHRHSF
0101: DYQPSPYPYQ PQGNFGAYGP PPPHYSYQEP AQYPPPETKP QEPLPPPQQT QGFQEYRRQD CLSTGGTGHD NVSNSGSSYP PVDELLGGLH ISTNQPGPSV
0201: PQLSSLPSNS WQSRPGDLYG YPNSSFPSNS HLPQLGRVDS SSSYYASTES PHSADMQMTL FGKGSLKVLL LHGNLDIWIY HAKNLPNMDM FHKTLGDMFG
0301: RLPGKIEGQL TSKITSDPYV SVSVAGAVIG RTYVMSNSEN PVWMQHFYVP VAHHAAEVHF VVKDSDVVGS QLIGLVTIPV EQIYSGAKIE GTYPILNSNG
0401: KPCKPGANLS LSIQYTPMDK LSVYHHGVGA GPDYQGVPGT YFPLRKGGTV RLYQDAHVPE GMLPGIRLDN GMSYEHGKCW HDMFDAIRQA RRLIYITGWS
0501: VWHKVKLIRD KLGPASECTL GELLRSKSQE GVRVLLLIWD DPTSRSILGY KTDGVMATHD EETRRFFKHS SVQVLLCPRN AGKRHSWVKQ REVGTIYTHH
0601: QKNVIVDADA GGNRRKIIAF VGGLDLCDGR YDTPQHPLFR TLQTIHKDDF HNPTFTGNLS GCPREPWHDL HSKIDGPAAY DVLTNFEERW LKAAKPSGIK
0701: KFKTSYDDAL LRIDRIPDIL GVSDTPTVSE NDPEAWHVQI FRSIDSNSVK GFPKDPKDAT CKNLVCGKNV LIDMSIHTAY VKAIRAAQHF IYIENQYFIG
0801: SSYNWNAHKD IGANNLIPME IALKIAEKIR ANERFAAYIV IPMWPEGVPT GAATQRILYW QHKTIQMMYE TIYKALVETG LEGAFSPQDY LNFFCLGNRE
0901: MVDGIDNSGT GSPSNANTPQ VTKRRECLLL KFLMFLKRGV PVVLQALSRK SRRFMVYVHS KGMVVDDEYV VIGSANINQR SMEGTRDTEI AMGAYQPQHT
1001: WARKHSGPRG QIYGYRMSLW AEHMATLDDC FTQPESIECV RKVRTMGERN WKQFAAEEVS DMRGHLLKYP VEVDRKGKVR PLPGSETFPD VGGNIVGSFI
1101: AIQENLTI
Arabidopsis Description
PLDBETA1phospholipase D beta 1 [Source:TAIR;Acc:AT2G42010]
SUBAcon: [peroxisome]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.