Factsheet for GSMUA_Achr10P24040_001

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, nucleus, cytosol

Predictor Summary:

nucleus 2
plastid 2
peroxisome 1
vacuole 1
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr10P...	Banana	cytosol, nucleus, peroxisome	25.31	58.38
GSMUA_Achr9P21120_001	Banana	nucleus	28.57	45.24
GSMUA_Achr7P10170_001	Banana	cytosol	33.83	25.0
GSMUA_Achr1P14590_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	34.34	24.55
GSMUA_Achr1P07360_001	Banana	cytosol	43.61	23.77
GSMUA_Achr2P00290_001	Banana	endoplasmic reticulum	22.06	23.53
GSMUA_Achr8P12030_001	Banana	plastid	44.11	21.89
GSMUA_Achr1P14920_001	Banana	plastid	41.85	21.03
GSMUA_Achr7P23470_001	Banana	cytosol	40.1	20.33
GSMUA_AchrUn_...	Banana	cytosol	42.61	19.81
GSMUA_Achr4P24890_001	Banana	cytosol, plastid	43.61	19.66
GSMUA_Achr11P...	Banana	cytosol	40.6	19.47
GSMUA_Achr10P...	Banana	cytosol, plastid	21.05	18.38
GSMUA_Achr6P35870_001	Banana	plasma membrane	41.1	17.25
GSMUA_Achr5P20150_001	Banana	cytosol	42.36	16.95
GSMUA_Achr11P...	Banana	mitochondrion	6.02	13.64
GSMUA_Achr9P21110_001	Banana	mitochondrion	18.55	11.75
GSMUA_Achr9P16530_001	Banana	cytosol, nucleus, peroxisome	27.82	10.5
GSMUA_Achr2P00270_001	Banana	cytosol, nucleus, peroxisome	6.27	3.08
GSMUA_Achr10P...	Banana	cytosol	1.25	1.64
Solyc04g051140.1.1	Tomato	cytosol	0.25	0.5
GSMUA_Achr11P...	Banana	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:GSMUA_Achr10P24040_001	EnsemblPlants:GSMUA_Achr10T24040_001	EnsemblPlantsGene:GSMUA_Achr10G24040_001	GO:GO:0003674	GO:GO:0003824	InterPro:IPR001736
InterPro:PLipase_D/transphosphatidylase	InterPro:PLipase_D_C	InterPro:PLipase_D_fam	KEGG:00564+3.1.4.4	KEGG:00565+3.1.4.4	PANTHER:PTHR18896
PANTHER:PTHR18896:SF66	PFAM:PF00614	PFAM:PF12357	PFscan:PS50035	SMART:SM00155	SUPFAM:SSF56024
UniParc:UPI000296B912	UniProt:M0RKX9	MapMan:50.3.1	:	:	:

Description

Putative Phospholipase D alpha 2 [Source:GMGC_GENE;Acc:GSMUA_Achr10G24040_001]

Coordinates

chr10:+:28520804..28522352

Molecular Weight (calculated)

44780.8 Da

IEP (calculated)

6.379

GRAVY (calculated)

-0.407

Length

399 amino acids

Sequence
(BLAST)

001: MFSHHQKTVS LDAPSGDGAS KVVSFVGGID LSDGRWIKQA PKELTNYLVN VRERPQIFPI PSDSATAESW NVQVFRSIDD ASAIGFPPDP SQADKMGLVT
101: GQNVTFEQSI HSSYVQGIRR AKRFIYIENQ YFFGSCASWG EHQNLTPMWP EGIPEGNTVQ AILHWNRLTM EMMYSIVAKA IEDKGLVGKV NPGDYLNFFC
201: LGNREEKKPG EYVPPKSPAH GTDYWRAQTN RRFLIYVHSK LMIVDDEYVI VGSANLNQRS LAGDRDSEIA HGSYQPAHLN GSDGRARGEV HGFRMSLWYE
301: HFMSYCADTS IFLDPENLEC VRTVRRFAEE LWSKYVGEEV VDLRGHLLPF PVLVSEAGTL SDLPKDGRFP DTNASVKGKR WVPTPPLTST SRVTDLLTT

Best Arabidopsis Sequence Match ( AT1G52570.1 )
(BLAST)

001: MEECLLHGRL HATIYEVDHL HAEGGRSGFL GSILANVEET IGVGKGETQL YATIDLEKAR VGRTRKITKE PKNPKWFESF HIYCGHMAKH VIFTVKDANP
101: IGATLIGRGY IPVEDILHGE EVDRWVDILD NEKNPIAGGS KIHVKLQYFG VEKDKNWNRG IKSAKFPGVP YTFFSQRRGC KVSLYQDAHI PGNFVPKIPL
201: AGGKNYEPHR CWEDIFDAIT NAKHLIYITG WSVYTEISLV RDSRRPKQGG DVTVGELLKK KASEGVKVIL LVWDDRTSVD LLKKDGLMAT HDEETENFFR
301: GTDVNCILCP RNPDDGGSIV QNLQISTMFT HHQKIVVVDS EMPSGGSRSR RIVSFVGGLD LCDGRYDTPF HSLFRTLDTA HHDDFHQPNF TGAAITKGGP
401: REPWHDIHCR LEGPIAWDVL YNFEQRWSRQ GGKDILVKMR ELGDIIIPPS PVLFSEDHDV WNVQLFRSID GGAAAGFPDS PEAAAEAGLV SGKDNIIDRS
501: IQDAYIHAIR RAKDFIYIEN QYFLGSSFAW SADGIKPEEI NALHLIPKEL SLKIVSKIKA GEKFKVYVVV PMWPEGIPES GSVQAILDWQ KRTMEMMYKD
601: VIKALRENGL EGEDPRDYLT FFCLGNREVK KDGEYEPSEK PEPDTDYIRA QEARRFMIYV HTKMMIVDDE YIIIGSANIN QRSMDGARDS EIAMGGYQPY
701: HLSTRQPARG QIHGFRMSLW YEHLGMLDET FLDPSSQECI QKVNRVADKY WDLYSSESLE HDLPGHLLRY PIGIASEGNI TELPGCEFFP DTKARILGVK
801: SDYMPPILTT

Arabidopsis Description

PLDALPHA2Phospholipase D alpha 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SSQ9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.