Factsheet for GSMUA_Achr9P21120_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
vacuole 2
mitochondrion 2
peroxisome 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d006262_P001	Maize	cytoskeleton, cytosol, peroxisome	50.4	82.47
PGSC0003DMT400009253	Potato	cytosol	57.94	55.94
GSMUA_Achr10P...	Banana	cytosol, nucleus, peroxisome	36.11	52.6
GSMUA_Achr10P...	Banana	cytosol, nucleus, peroxisome	45.24	28.57
GSMUA_Achr1P07360_001	Banana	cytosol	81.35	28.01
CDY42882	Canola	nucleus	32.54	25.47
GSMUA_AchrUn_...	Banana	cytosol	78.97	23.19
GSMUA_Achr1P14920_001	Banana	plastid	69.84	22.17
GSMUA_Achr7P10170_001	Banana	cytosol	46.43	21.67
Os09t0543100-02	Rice	plasma membrane	71.43	21.08
TraesCS5A01G337100.2	Wheat	cytosol	69.84	20.42
TraesCS5B01G336100.1	Wheat	cytosol	69.44	20.3
Zm00001d006257_P009	Maize	cytosol	68.65	20.21
GSMUA_Achr7P23470_001	Banana	cytosol	62.7	20.08
GSMUA_Achr1P14590_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	44.44	20.07
PGSC0003DMT400025590	Potato	cytosol	64.29	19.98
KRH60977	Soybean	cytosol	66.67	19.83
KXG36094	Sorghum	cytosol	67.46	19.79
KRH51648	Soybean	cytosol	65.87	19.6
GSMUA_Achr11P...	Banana	cytosol	64.68	19.59
Bra034939.1-P	Field mustard	cytosol	64.29	19.45
Solyc04g082000.2.1	Tomato	cytosol	64.68	19.43
VIT_18s0001g00770.t01	Wine grape	nucleus	67.06	19.31
Zm00001d022594_P002	Maize	cytosol	67.06	19.1
Solyc02g061850.2.1	Tomato	cytosol	63.1	18.71
VIT_00s0264g00100.t01	Wine grape	cytosol	64.29	18.56
Solyc02g083340.2.1	Tomato	nucleus	63.1	18.36
Bra017730.1-P	Field mustard	cytosol	61.11	18.36
Bra010512.1-P	Field mustard	cytosol	58.33	18.22
KRH76589	Soybean	extracellular	62.3	18.17
CDY35793	Canola	cytosol	62.3	18.15
KRH28860	Soybean	mitochondrion	61.9	18.01
GSMUA_Achr8P12030_001	Banana	plastid	57.14	17.91
TraesCS5D01G341800.2	Wheat	cytosol	58.33	17.75
AT4G35790.1	Thale cress	cytosol	60.71	17.63
CDX72557	Canola	cytosol	59.92	17.46
CDY41630	Canola	cytosol	59.92	17.42
CDY47037	Canola	cytosol	61.11	17.4
GSMUA_Achr2P00290_001	Banana	endoplasmic reticulum	25.79	17.38
CDY67335	Canola	cytosol	59.52	17.32
GSMUA_Achr10P...	Banana	cytosol, plastid	27.38	15.1
GSMUA_Achr4P24890_001	Banana	cytosol, plastid	52.78	15.03
GSMUA_Achr11P...	Banana	mitochondrion	9.92	14.2
GSMUA_Achr5P20150_001	Banana	cytosol	54.76	13.84
GSMUA_Achr6P35870_001	Banana	plasma membrane	42.86	11.36
HORVU5Hr1G084740.4	Barley	plastid	19.84	6.99
GSMUA_Achr9P16530_001	Banana	cytosol, nucleus, peroxisome	27.78	6.62
CDX80734	Canola	cytosol	3.17	6.61
KRH37270	Soybean	cytosol	4.76	4.56
GSMUA_Achr9P21110_001	Banana	mitochondrion	6.35	2.54
PGSC0003DMT400009250	Potato	cytosol	4.37	1.99
GSMUA_Achr10P...	Banana	cytosol	1.98	1.64
GSMUA_Achr2P00270_001	Banana	cytosol, nucleus, peroxisome	1.59	0.49
GSMUA_Achr11P...	Banana	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:GSMUA_Achr9P21120_001	EnsemblPlants:GSMUA_Achr9T21120_001	EnsemblPlantsGene:GSMUA_Achr9G21120_001	Gene3D:3.30.870.10	GO:GO:0003674	GO:GO:0003824
InterPro:IPR001736	InterPro:PLipase_D/transphosphatidylase	InterPro:PLipase_D_C	InterPro:PLipase_D_fam	KEGG:00564+3.1.4.4	KEGG:00565+3.1.4.4
PANTHER:PTHR18896	PANTHER:PTHR18896:SF86	PFAM:PF00614	PFAM:PF12357	PFscan:PS50035	SMART:SM00155
SUPFAM:SSF56024	UniParc:UPI0002952793	UniProt:M0U271	MapMan:50.3.1	:	:

Description

Phospholipase D delta [Source:GMGC_GENE;Acc:GSMUA_Achr9G21120_001]

Coordinates

chr9:+:25846143..25854710

Molecular Weight (calculated)

28862.5 Da

IEP (calculated)

6.237

GRAVY (calculated)

-0.550

Length

252 amino acids

Sequence
(BLAST)

001: MLFHPRYKLQ SGSGQGLNPD TTIYIESCQT DIGQTIQMMY EIVARALKFM NLENAHPQDY LNFYCLGNRE EAPKDNLQQD DQSLEKIPEE LSQKFRRFMI
101: YVHAKGMIVD DEYVIIGSAN INQRSLAGSR DTEIAMGAYQ PHHTWTKRKR HPHGQVYGYR MSLWAEHLGM IDDRFKEPNS LECVKFVNKI AEENWSRYTA
201: EEITPLTGHL LKYPVKVEAD GKVGPLPNQE CFPDVGGKIL GAYTALPDTL TM

Best Arabidopsis Sequence Match ( AT2G42010.1 )
(BLAST)

0001: MDNHGPRYPY PYGQYPYPYP YPAPYRPPSS EPYPPPPTNQ YSAPYYPYPP PPYATPPPYA SPPPPHQHTS GSHSGPLDYS HNPQPSSLAA APPEYHRHSF
0101: DYQPSPYPYQ PQGNFGAYGP PPPHYSYQEP AQYPPPETKP QEPLPPPQQT QGFQEYRRQD CLSTGGTGHD NVSNSGSSYP PVDELLGGLH ISTNQPGPSV
0201: PQLSSLPSNS WQSRPGDLYG YPNSSFPSNS HLPQLGRVDS SSSYYASTES PHSADMQMTL FGKGSLKVLL LHGNLDIWIY HAKNLPNMDM FHKTLGDMFG
0301: RLPGKIEGQL TSKITSDPYV SVSVAGAVIG RTYVMSNSEN PVWMQHFYVP VAHHAAEVHF VVKDSDVVGS QLIGLVTIPV EQIYSGAKIE GTYPILNSNG
0401: KPCKPGANLS LSIQYTPMDK LSVYHHGVGA GPDYQGVPGT YFPLRKGGTV RLYQDAHVPE GMLPGIRLDN GMSYEHGKCW HDMFDAIRQA RRLIYITGWS
0501: VWHKVKLIRD KLGPASECTL GELLRSKSQE GVRVLLLIWD DPTSRSILGY KTDGVMATHD EETRRFFKHS SVQVLLCPRN AGKRHSWVKQ REVGTIYTHH
0601: QKNVIVDADA GGNRRKIIAF VGGLDLCDGR YDTPQHPLFR TLQTIHKDDF HNPTFTGNLS GCPREPWHDL HSKIDGPAAY DVLTNFEERW LKAAKPSGIK
0701: KFKTSYDDAL LRIDRIPDIL GVSDTPTVSE NDPEAWHVQI FRSIDSNSVK GFPKDPKDAT CKNLVCGKNV LIDMSIHTAY VKAIRAAQHF IYIENQYFIG
0801: SSYNWNAHKD IGANNLIPME IALKIAEKIR ANERFAAYIV IPMWPEGVPT GAATQRILYW QHKTIQMMYE TIYKALVETG LEGAFSPQDY LNFFCLGNRE
0901: MVDGIDNSGT GSPSNANTPQ ALSRKSRRFM VYVHSKGMVV DDEYVVIGSA NINQRSMEGT RDTEIAMGAY QPQHTWARKH SGPRGQIYGY RMSLWAEHMA
1001: TLDDCFTQPE SIECVRKVRT MGERNWKQFA AEEVSDMRGH LLKYPVEVDR KGKVRPLPGS ETFPDVGGNI VGSFIAIQEN LTI

Arabidopsis Description

PLDBETA1phospholipase D beta 1 [Source:TAIR;Acc:AT2G42010]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.