CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
vacuole 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH60977	Soybean	cytosol	95.87	95.87
KRH76243	Soybean	cytosol	8.97	92.68
PGSC0003DMT400025590	Potato	cytosol	74.5	77.81
KRH37270	Soybean	cytosol	23.85	76.81
Solyc04g082000.2.1	Tomato	cytosol	75.92	76.64
VIT_18s0001g00770.t01	Wine grape	nucleus	76.15	73.71
Bra034939.1-P	Field mustard	cytosol	72.37	73.59
Zm00001d006262_P001	Maize	cytoskeleton, cytosol, peroxisome	12.75	70.13
GSMUA_Achr1P07360_001	Banana	cytosol	60.57	70.08
GSMUA_AchrUn_...	Banana	cytosol	69.07	68.18
KXG36094	Sorghum	cytosol	68.12	67.17
Os09t0543100-02	Rice	plasma membrane	67.41	66.86
KRH76589	Soybean	extracellular	68.0	66.67
KRH28860	Soybean	mitochondrion	67.77	66.28
Zm00001d006257_P009	Maize	cytosol	66.59	65.89
GSMUA_Achr9P21120_001	Banana	nucleus	19.6	65.87
TraesCS5A01G337100.2	Wheat	cytosol	66.47	65.31
GSMUA_Achr1P14920_001	Banana	plastid	61.16	65.24
TraesCS5B01G336100.1	Wheat	cytosol	66.35	65.2
TraesCS5D01G341800.2	Wheat	cytosol	63.28	64.73
HORVU5Hr1G084740.4	Barley	plastid	53.6	63.5
Zm00001d022594_P002	Maize	cytosol	64.94	62.15
KRH59149	Soybean	cytosol	62.34	61.61
GSMUA_Achr11P...	Banana	cytosol	60.33	61.42
KRH43039	Soybean	cytosol	62.1	61.38
CDX80734	Canola	cytosol	8.5	59.5
KRG89825	Soybean	cytoskeleton, cytosol, peroxisome	18.77	54.64
KRH77467	Soybean	nucleus	52.07	51.7
KRG93706	Soybean	nucleus	17.24	50.17
KRH77469	Soybean	nucleus	4.13	50.0
OQU84227	Sorghum	cytosol	53.72	49.51
TraesCS6B01G096200.1	Wheat	cytosol	49.7	48.67
Zm00001d015033_P001	Maize	extracellular, plastid, vacuole	53.48	48.66
TraesCS6A01G071700.1	Wheat	cytosol, nucleus, plastid	49.7	48.45
HORVU6Hr1G012780.6	Barley	cytosol, nucleus, plastid	48.64	47.41
KRH09736	Soybean	cytosol, endoplasmic reticulum, nucleus	38.37	45.71
KRH47460	Soybean	cytosol	43.57	45.61
KRH44445	Soybean	cytosol	42.27	45.43
KRH65182	Soybean	cytosol	40.5	45.19
KRH23570	Soybean	endoplasmic reticulum	42.62	44.73
KRH52443	Soybean	cytosol	43.09	44.19
KRH52444	Soybean	cytosol, plastid	42.03	43.36
KRH48290	Soybean	nucleus	53.48	43.27
KRH77470	Soybean	cytosol	6.85	42.34
KRH01625	Soybean	cytosol	53.13	41.02
KRH70487	Soybean	cytosol	53.25	40.78
KRH61774	Soybean	cytosol	16.53	40.11
KRH10002	Soybean	cytosol	35.89	40.05
KRH09735	Soybean	cytosol	21.37	39.01
KRH47139	Soybean	cytosol	34.71	38.23
KRH44164	Soybean	cytosol	34.71	37.89
KRH23329	Soybean	cytosol	8.5	27.17
Os02t0120200-01	Rice	extracellular	24.79	23.08
KRH12101	Soybean	plastid	24.2	18.25
KRH37058	Soybean	plastid	23.97	18.03
KRG92923	Soybean	cytosol, nucleus, peroxisome	22.55	17.05
KRH16190	Soybean	cytosol	2.24	16.52
KRH05308	Soybean	endoplasmic reticulum	3.42	14.72

Protein Annotations

KEGG:00564+3.1.4.4	KEGG:00565+3.1.4.4	EntrezGene:100789389	Gene3D:2.60.40.150	Gene3D:3.30.870.10	MapMan:5.7.2.4.3
EMBL:ACUP02003383	InterPro:C2_dom	InterPro:C2_domain_sf	EnsemblPlantsGene:GLYMA_06G020500	GO:GO:0003674	GO:GO:0003824
GO:GO:0004630	GO:GO:0005488	GO:GO:0005509	GO:GO:0005575	GO:GO:0006629	GO:GO:0008150
GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016042
GO:GO:0016787	GO:GO:0046470	GO:GO:0070290	UniProt:I1K7F8	InterPro:IPR000008	InterPro:IPR001736
InterPro:IPR035892	EnsemblPlants:KRH51648	ProteinID:KRH51648	ProteinID:KRH51648.1	PFAM:PF00168	PFAM:PF00614
PFAM:PF12357	PFAM:PF13091	PIRSF:PIRSF036470	InterPro:PLD-like_dom	InterPro:PLipase_D/transphosphatidylase	InterPro:PLipase_D_C
InterPro:PLipase_D_fam	InterPro:PLipase_D_pln	PFscan:PS50004	PFscan:PS50035	PANTHER:PTHR18896	PANTHER:PTHR18896:SF112
MetaCyc:PWY-3561	MetaCyc:PWY-7039	SMART:SM00155	SMART:SM00239	SUPFAM:SSF49562	SUPFAM:SSF56024
UniParc:UPI0002955EDF	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr6:-:1547473..1554875

Molecular Weight (calculated)

96415.8 Da

IEP (calculated)

7.478

GRAVY (calculated)

-0.396

Length

847 amino acids

Sequence
(BLAST)

001: MPHNPDTVVY LHGTLDLVIE DARFLPNMDM LSERVRRFFS ALNTCSASIT GKRKQRHARH RHRKIITSDP YVTVCLAGAT VARTRVISNS QNPTWDEHFK
101: IPLAHPASQV EFYVKDNDMF GADLIGVATV SAERILSGEA IRDWFPIIGT FGKPPKPDCA VRLAMKFTRC EDSFMYRSRT ETDPDRFVVR DSYFPVRHGG
201: SVTLYQDAHV PDSMLPEVEL EDGVVFEHGK CWEDICHAIL GAHHLVYIVG WSIYHKVKLV REPTKALPSG GNLNLGELLK YKSQEGLRVL LLVWDDKTSH
301: SKFGINTSGV MQTHDEETRK FFKHSSVRCL LSPRYASSKL SIFKQQVVGT LFTHHQKCVI VDTQAHGNNR KITAFIGGLD LCDGRYDTPE HRILRDIDTV
401: YQDDYHNPTF CAGTKGPRQP WHDLHCKIEG PAAYDILTNF EQRWRKATKW SELGRKLKRV SHWNDDSLIK LERIFWILSP SESTPVDDPE LWVSKEDDPE
501: NWHVQVFRSI DSGSLKGFPK DVVVAETQNL VCAKNLVIDK SIQTAYIHAI RSAQHFIYIE NQYFIGSSFA WPAYKEAGAD NLIPVELALK IVSKIRSKER
601: FTVYIVIPMW PEGSPSSTSV QEILFWQGQT MKMMYEIIAL ELKSMQLDSH PQDYLNFYCL GNREQLTTEV SSSSNSPSDN GETVSASQKF RRFMIYVHAK
701: GMIVDDEYVI LGSANINQRS LAGSRDTEIA MGAHQPHHTW SQKKRHPHGQ VYGYRMSLWA EHMETIEACF KEPESLECVK SVNKIAEDNW KKYTADDYTP
801: LQGHIMKYPV CVNAYGKVKS LTGFESFPDV GGKVLGSRST LPDALTT

Best Arabidopsis Sequence Match ( AT4G35790.2 )
(BLAST)

001: MAEKVSEDVM LLHGDLDLKI VKARRLPNMD MFSEHLRRLF TACNACARPT DTDDVDPRDK GEFGDKNIRS HRKVITSDPY VTVVVPQATL ARTRVLKNSQ
101: EPLWDEKFNI SIAHPFAYLE FQVKDDDVFG AQIIGTAKIP VRDIASGERI SGWFPVLGAS GKPPKAETAI FIDMKFTPFD QIHSYRCGIA GDPERRGVRR
201: TYFPVRKGSQ VRLYQDAHVM DGTLPAIGLD NGKVYEHGKC WEDICYAISE AHHMIYIVGW SIFHKIKLVR ETKVPRDKDM TLGELLKYKS QEGVRVLLLV
301: WDDKTSHDKF GIKTPGVMGT HDEETRKFFK HSSVICVLSP RYASSKLGLF KQQVVGTLFT HHQKCVLVDT QAVGNNRKVT AFIGGLDLCD GRYDTPEHRI
401: LHDLDTVFKD DFHNPTFPAG TKAPRQPWHD LHCRIDGPAA YDVLINFEQR WRKATRWKEF SLRLKGKTHW QDDALIRIGR ISWILSPVFK FLKDGTSIIP
501: EDDPCVWVSK EDDPENWHVQ IFRSIDSGSV KGFPKYEDEA EAQHLECAKR LVVDKSIQTA YIQTIRSAQH FIYIENQYFL GSSYAWPSYR DAGADNLIPM
601: ELALKIVSKI RAKERFAVYV VIPLWPEGDP KSGPVQEILY WQSQTMQMMY DVIAKELKAV QSDAHPLDYL NFYCLGKREQ LPDDMPATNG SVVSDSYNFQ
701: RFMIYVHAKG MIVDDEYVLM GSANINQRSM AGTKDTEIAM GAYQPNHTWA HKGRHPRGQV YGYRMSLWAE HLGKTGDEFV EPSDLECLKK VNTISEENWK
801: RFIDPKFSEL QGHLIKYPLQ VDVDGKVSPL PDYETFPDVG GKIIGAHSMA LPDTLTT

Arabidopsis Description

PLDDELTAPhospholipase D delta [Source:UniProtKB/Swiss-Prot;Acc:Q9C5Y0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.