CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
vacuole 1
cytosol 3
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH51648	Soybean	cytosol	95.87	95.87
KRH76243	Soybean	cytosol	9.09	93.9
PGSC0003DMT400025590	Potato	cytosol	75.09	78.42
Solyc04g082000.2.1	Tomato	cytosol	76.51	77.23
KRH37270	Soybean	cytosol	23.73	76.43
Bra034939.1-P	Field mustard	cytosol	73.55	74.79
VIT_18s0001g00770.t01	Wine grape	nucleus	77.21	74.74
Zm00001d006262_P001	Maize	cytoskeleton, cytosol, peroxisome	13.34	73.38
GSMUA_Achr1P07360_001	Banana	cytosol	60.8	70.36
GSMUA_AchrUn_...	Banana	cytosol	70.13	69.23
KXG36094	Sorghum	cytosol	69.3	68.34
KRH76589	Soybean	extracellular	69.19	67.82
Os09t0543100-02	Rice	plasma membrane	68.24	67.68
Zm00001d006257_P009	Maize	cytosol	68.0	67.29
KRH28860	Soybean	mitochondrion	68.71	67.21
GSMUA_Achr9P21120_001	Banana	nucleus	19.83	66.67
TraesCS5A01G337100.2	Wheat	cytosol	67.41	66.24
TraesCS5B01G336100.1	Wheat	cytosol	67.18	66.01
GSMUA_Achr1P14920_001	Banana	plastid	61.87	66.0
TraesCS5D01G341800.2	Wheat	cytosol	63.99	65.46
HORVU5Hr1G084740.4	Barley	plastid	54.31	64.34
Zm00001d022594_P002	Maize	cytosol	66.23	63.39
GSMUA_Achr11P...	Banana	cytosol	61.04	62.14
KRH59149	Soybean	cytosol	62.81	62.08
KRH43039	Soybean	cytosol	62.46	61.73
CDX80734	Canola	cytosol	8.74	61.16
KRG89825	Soybean	cytoskeleton, cytosol, peroxisome	18.89	54.98
KRH77467	Soybean	nucleus	52.18	51.82
OQU84227	Sorghum	cytosol	54.78	50.49
KRG93706	Soybean	nucleus	17.24	50.17
KRH77469	Soybean	nucleus	4.13	50.0
Zm00001d015033_P001	Maize	extracellular, plastid, vacuole	54.43	49.52
TraesCS6B01G096200.1	Wheat	cytosol	49.82	48.79
TraesCS6A01G071700.1	Wheat	cytosol, nucleus, plastid	49.82	48.56
HORVU6Hr1G012780.6	Barley	cytosol, nucleus, plastid	48.88	47.64
KRH47460	Soybean	cytosol	44.27	46.35
KRH44445	Soybean	cytosol	42.98	46.19
KRH09736	Soybean	cytosol, endoplasmic reticulum, nucleus	38.72	46.13
KRH23570	Soybean	endoplasmic reticulum	43.45	45.6
KRH65182	Soybean	cytosol	40.5	45.19
KRH52443	Soybean	cytosol	43.57	44.67
KRH52444	Soybean	cytosol, plastid	42.98	44.34
KRH48290	Soybean	nucleus	53.72	43.46
KRH77470	Soybean	cytosol	6.85	42.34
KRH01625	Soybean	cytosol	53.36	41.2
KRH70487	Soybean	cytosol	53.6	41.05
KRH10002	Soybean	cytosol	36.48	40.71
KRH61774	Soybean	cytosol	16.77	40.69
KRH09735	Soybean	cytosol	21.96	40.09
KRH47139	Soybean	cytosol	35.18	38.75
KRH44164	Soybean	cytosol	35.3	38.53
KRH23329	Soybean	cytosol	8.62	27.55
Os02t0120200-01	Rice	extracellular	25.74	23.96
KRH12101	Soybean	plastid	24.68	18.61
KRH37058	Soybean	plastid	24.44	18.38
KRG92923	Soybean	cytosol, nucleus, peroxisome	23.02	17.41
KRH16190	Soybean	cytosol	2.36	17.39
KRH05308	Soybean	endoplasmic reticulum	3.54	15.23

Protein Annotations

KEGG:00564+3.1.4.4	KEGG:00565+3.1.4.4	EntrezGene:100795859	Gene3D:2.60.40.150	Gene3D:3.30.870.10	MapMan:5.7.2.4.3
EMBL:ACUP02002143	InterPro:C2_dom	InterPro:C2_domain_sf	EnsemblPlantsGene:GLYMA_04G020400	GO:GO:0003674	GO:GO:0003824
GO:GO:0004630	GO:GO:0005488	GO:GO:0005509	GO:GO:0005575	GO:GO:0006629	GO:GO:0008150
GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0016020	GO:GO:0016042	GO:GO:0016787
GO:GO:0046470	GO:GO:0070290	UniProt:I1JSY8	InterPro:IPR000008	InterPro:IPR001736	InterPro:IPR035892
EnsemblPlants:KRH60977	ProteinID:KRH60977	ProteinID:KRH60977.1	PFAM:PF00168	PFAM:PF00614	PFAM:PF12357
PFAM:PF13091	PIRSF:PIRSF036470	InterPro:PLD-like_dom	InterPro:PLipase_D/transphosphatidylase	InterPro:PLipase_D_C	InterPro:PLipase_D_fam
InterPro:PLipase_D_pln	PFscan:PS50004	PFscan:PS50035	PANTHER:PTHR18896	PANTHER:PTHR18896:SF112	MetaCyc:PWY-3561
MetaCyc:PWY-7039	SMART:SM00155	SMART:SM00239	SUPFAM:SSF49562	SUPFAM:SSF56024	UniParc:UPI000233997F
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr4:-:1603209..1610515

Molecular Weight (calculated)

96100.3 Da

IEP (calculated)

7.367

GRAVY (calculated)

-0.396

Length

847 amino acids

Sequence
(BLAST)

001: MPHNPHTVVY LHGTLDLVIE EARFLPNMDM LSERVRRFFS ALNTCSASIS GKRKQQQARH RHRKIITSDP YVTVCLAGAT VARTRVISNS QDPTWNEHFK
101: IPLAHPASQV EFYVKDNDMF GADLIGVATV SAERILSGEA ISDWFPIIGT FGKPPKPDCA VRLAMKFTRC EDSPMYRAGT ESDPDRFVVR ESYFPVRRGG
201: SVTLYQDAHV PDSMLPEVEL EDGVVFEHGK CWEDICHAIL EAHHLVYIVG WSIYHKVKLV REPTKPLPSG GNLSLGELLK YKSQEGLRVL LLVWDDKTSH
301: SKFFINTSGV MQTHDEETRK FFKHSSVRCL LSPRYASSKL SIFRQQVVGT LFTHHQKCVI VDTQAHGNNR KITAFIGGLD LCDGRYDTPE HRILRDIDTV
401: YQDDYHNPTF CAGTKGPRQP WHDLHCKIEG PAAYDILTNF EQRWRKATRW SELGRKLKRV SHWNDDSLIK LERISWILSP SESTPIDDPE LWVSKEDDPE
501: NWHVQVFRSI DSGSLKGFPK DVVVAETQNL VCAKNLVIDK SIQTAYIHAI RSAQHFIYIE NQYFIGSSFA WPAYKEAGAD NLIPVELALK IVSKIRSKER
601: FAVYIVIPMW PEGSPSSTSV QEILFWQGQT MKMMYEIIAR ELKSMQLDSH PQDYLNFYCL GNREQLTTEV SSSSSSPSDN GETVSASQKF RRFMIYVHAK
701: GMIVDDEYVI LGSANINQRS LAGSRDTEIA MGAYQPHHTW SQKKGHPHGQ VYGYRMSLWA EHTGTIEACF KEPECLECVK SVNKIAEDNW KKYTADDYSP
801: LQGHLMKYPV SVNANGKVKS LPGFESFPDV GGKVLGSRST LPDALTT

Best Arabidopsis Sequence Match ( AT4G35790.2 )
(BLAST)

001: MAEKVSEDVM LLHGDLDLKI VKARRLPNMD MFSEHLRRLF TACNACARPT DTDDVDPRDK GEFGDKNIRS HRKVITSDPY VTVVVPQATL ARTRVLKNSQ
101: EPLWDEKFNI SIAHPFAYLE FQVKDDDVFG AQIIGTAKIP VRDIASGERI SGWFPVLGAS GKPPKAETAI FIDMKFTPFD QIHSYRCGIA GDPERRGVRR
201: TYFPVRKGSQ VRLYQDAHVM DGTLPAIGLD NGKVYEHGKC WEDICYAISE AHHMIYIVGW SIFHKIKLVR ETKVPRDKDM TLGELLKYKS QEGVRVLLLV
301: WDDKTSHDKF GIKTPGVMGT HDEETRKFFK HSSVICVLSP RYASSKLGLF KQQVVGTLFT HHQKCVLVDT QAVGNNRKVT AFIGGLDLCD GRYDTPEHRI
401: LHDLDTVFKD DFHNPTFPAG TKAPRQPWHD LHCRIDGPAA YDVLINFEQR WRKATRWKEF SLRLKGKTHW QDDALIRIGR ISWILSPVFK FLKDGTSIIP
501: EDDPCVWVSK EDDPENWHVQ IFRSIDSGSV KGFPKYEDEA EAQHLECAKR LVVDKSIQTA YIQTIRSAQH FIYIENQYFL GSSYAWPSYR DAGADNLIPM
601: ELALKIVSKI RAKERFAVYV VIPLWPEGDP KSGPVQEILY WQSQTMQMMY DVIAKELKAV QSDAHPLDYL NFYCLGKREQ LPDDMPATNG SVVSDSYNFQ
701: RFMIYVHAKG MIVDDEYVLM GSANINQRSM AGTKDTEIAM GAYQPNHTWA HKGRHPRGQV YGYRMSLWAE HLGKTGDEFV EPSDLECLKK VNTISEENWK
801: RFIDPKFSEL QGHLIKYPLQ VDVDGKVSPL PDYETFPDVG GKIIGAHSMA LPDTLTT

Arabidopsis Description

PLDDELTAPhospholipase D delta [Source:UniProtKB/Swiss-Prot;Acc:Q9C5Y0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.