Factsheet for PGSC0003DMT400025590

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
vacuole 1
cytosol 3
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc04g082000.2.1	Tomato	cytosol	97.53	94.28
KRH60977	Soybean	cytosol	78.42	75.09
KRH51648	Soybean	cytosol	77.81	74.5
Zm00001d006262_P001	Maize	cytoskeleton, cytosol, peroxisome	13.81	72.73
VIT_18s0001g00770.t01	Wine grape	nucleus	77.93	72.23
Bra034939.1-P	Field mustard	cytosol	73.61	71.67
GSMUA_Achr1P07360_001	Banana	cytosol	62.02	68.72
PGSC0003DMT400009253	Potato	cytosol	21.82	67.82
KXG36094	Sorghum	cytosol	71.15	67.17
GSMUA_AchrUn_...	Banana	cytosol	71.02	67.13
KRH37270	Soybean	cytosol	21.7	66.92
Os09t0543100-02	Rice	plasma membrane	70.28	66.74
Zm00001d006257_P009	Maize	cytosol	69.91	66.24
GSMUA_Achr1P14920_001	Banana	plastid	64.73	66.12
TraesCS5A01G337100.2	Wheat	cytosol	69.54	65.43
TraesCS5B01G336100.1	Wheat	cytosol	69.3	65.2
TraesCS5D01G341800.2	Wheat	cytosol	65.97	64.61
GSMUA_Achr9P21120_001	Banana	nucleus	19.98	64.29
PGSC0003DMT400009250	Potato	cytosol	43.53	63.83
HORVU5Hr1G084740.4	Barley	plastid	55.12	62.52
Zm00001d022594_P002	Maize	cytosol	67.57	61.92
GSMUA_Achr11P...	Banana	cytosol	63.01	61.42
PGSC0003DMT400026602	Potato	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, vacuole	22.93	60.78
PGSC0003DMT400000378	Potato	cytosol	19.24	59.54
PGSC0003DMT400011523	Potato	cytosol	62.15	58.88
CDX80734	Canola	cytosol	8.26	55.37
PGSC0003DMT400058531	Potato	plastid	53.39	51.0
OQU84227	Sorghum	cytosol	55.12	48.64
Zm00001d015033_P001	Maize	extracellular, plastid, vacuole	55.12	48.01
PGSC0003DMT400006661	Potato	cytosol	33.29	46.96
TraesCS6B01G096200.1	Wheat	cytosol	50.06	46.94
TraesCS6A01G071700.1	Wheat	cytosol, nucleus, plastid	49.94	46.61
PGSC0003DMT400024828	Potato	cytosol	7.27	46.46
PGSC0003DMT400024831	Potato	extracellular	46.12	46.34
PGSC0003DMT400073469	Potato	cytosol	45.5	45.61
HORVU6Hr1G012780.6	Barley	cytosol, nucleus, plastid	48.71	45.45
PGSC0003DMT400001650	Potato	cytosol, plastid	45.25	45.25
PGSC0003DMT400020297	Potato	cytosol	44.02	43.59
Os02t0120200-01	Rice	extracellular	25.15	22.42

Protein Annotations

KEGG:00564+3.1.4.4	KEGG:00565+3.1.4.4	Gene3D:2.60.40.150	Gene3D:3.30.870.10	MapMan:5.7.2.4.3	InterPro:C2_dom
InterPro:C2_domain_sf	GO:GO:0003674	GO:GO:0003824	GO:GO:0004630	GO:GO:0005488	GO:GO:0005509
GO:GO:0005575	GO:GO:0006629	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987
GO:GO:0016020	GO:GO:0016042	GO:GO:0016787	GO:GO:0046470	GO:GO:0070290	InterPro:IPR000008
InterPro:IPR001736	InterPro:IPR035892	UniProt:M1ALP3	PFAM:PF00168	PFAM:PF00614	PFAM:PF12357
PFAM:PF13091	EnsemblPlantsGene:PGSC0003DMG400009887	PGSC:PGSC0003DMG400009887	EnsemblPlants:PGSC0003DMT400025590	PIRSF:PIRSF036470	InterPro:PLD-like_dom
InterPro:PLipase_D/transphosphatidylase	InterPro:PLipase_D_C	InterPro:PLipase_D_fam	InterPro:PLipase_D_pln	PFscan:PS50004	PFscan:PS50035
PANTHER:PTHR18896	PANTHER:PTHR18896:SF112	SMART:SM00155	SMART:SM00239	SUPFAM:SSF49562	SUPFAM:SSF56024
UniParc:UPI00029665FC	SEG:seg	:	:	:	:

Description

Phospholipase D delta [Source:PGSC_GENE;Acc:PGSC0003DMG400009887]

Coordinates

chr4:+:71239868..71248829

Molecular Weight (calculated)

92292.1 Da

IEP (calculated)

7.654

GRAVY (calculated)

-0.406

Length

811 amino acids

Sequence
(BLAST)

001: MDLVTERLSR CFTALDICRK PFTRRRRKGH HRKIITSDPY VTVCLTGATV ARTRVISNCQ DPVWNEHFKI PLAHPVSVVE FQVKDNDVFG ADYIGVATVP
101: AEKIKSGELI DDWFPIIGPY GKPPKPDCAI RLQMKFIHCD GNPAYNSGVS EDCGLKASYF PARHGGSVTL YQDAHVPDGM LPEIKLDDDK IFEHSKCWED
201: ICHAILEAHH LVYVVGWSIF HKVKLVREPS KPLPSGGDLT LGELLKYKSE EGVRVLLLVW DDKTSHSKFF IQTDGVMQTH DEETRKFFKH SSVNCVLAPR
301: YASSKLSIFR QQVVGTLYTH HQKCVIVDTQ ASGNNRKVSA FIGGLDLCDG RYDTPEHRLF RDLDTVFKDD YHNPTFSAGT KAPRQPWHDL HCKIEGPAAY
401: DVLTNFEQRW RKATKWSEFG RRLKKISHWH DDALIKIERI SWITSPSSSV PNDDQSLWVS KEDDPENWHV QVFRSIDSGS LKGFPKDVLL AESQNLVCAK
501: NLVIDRSIQM AYIQAIRQAQ HFIYIENQYF LGSSYAWPSY KEAGADNLIP MELALKIASK IRAKERFAVY IVIPMWPEGV PTSASVQEIL YWQRQTMKMM
601: YGIIAQELKS SQLQDVQLSD YLNFYCLGNR EELRGESKSN YASNGDLISA SQKFGRFMIY VHAKGMIVDD EYVILGSANI NQRSMAGSRD TEIAMGAYQP
701: HHTWAMKKRH PHGQVYGYRM SLWAEHMGKL DDIFTKPESL NCVKHVNEVA EDNWNRFTAD EFKPLQGHLL KYPVQVGTDG KVNSLPGHEY FPDVGGKILG
801: ARTNLPDALT T

Best Arabidopsis Sequence Match ( AT4G35790.2 )
(BLAST)

001: MAEKVSEDVM LLHGDLDLKI VKARRLPNMD MFSEHLRRLF TACNACARPT DTDDVDPRDK GEFGDKNIRS HRKVITSDPY VTVVVPQATL ARTRVLKNSQ
101: EPLWDEKFNI SIAHPFAYLE FQVKDDDVFG AQIIGTAKIP VRDIASGERI SGWFPVLGAS GKPPKAETAI FIDMKFTPFD QIHSYRCGIA GDPERRGVRR
201: TYFPVRKGSQ VRLYQDAHVM DGTLPAIGLD NGKVYEHGKC WEDICYAISE AHHMIYIVGW SIFHKIKLVR ETKVPRDKDM TLGELLKYKS QEGVRVLLLV
301: WDDKTSHDKF GIKTPGVMGT HDEETRKFFK HSSVICVLSP RYASSKLGLF KQQVVGTLFT HHQKCVLVDT QAVGNNRKVT AFIGGLDLCD GRYDTPEHRI
401: LHDLDTVFKD DFHNPTFPAG TKAPRQPWHD LHCRIDGPAA YDVLINFEQR WRKATRWKEF SLRLKGKTHW QDDALIRIGR ISWILSPVFK FLKDGTSIIP
501: EDDPCVWVSK EDDPENWHVQ IFRSIDSGSV KGFPKYEDEA EAQHLECAKR LVVDKSIQTA YIQTIRSAQH FIYIENQYFL GSSYAWPSYR DAGADNLIPM
601: ELALKIVSKI RAKERFAVYV VIPLWPEGDP KSGPVQEILY WQSQTMQMMY DVIAKELKAV QSDAHPLDYL NFYCLGKREQ LPDDMPATNG SVVSDSYNFQ
701: RFMIYVHAKG MIVDDEYVLM GSANINQRSM AGTKDTEIAM GAYQPNHTWA HKGRHPRGQV YGYRMSLWAE HLGKTGDEFV EPSDLECLKK VNTISEENWK
801: RFIDPKFSEL QGHLIKYPLQ VDVDGKVSPL PDYETFPDVG GKIIGAHSMA LPDTLTT

Arabidopsis Description

PLDDELTAPhospholipase D delta [Source:UniProtKB/Swiss-Prot;Acc:Q9C5Y0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.