Factsheet for PGSC0003DMT400024828

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
vacuole 2
cytosol 3
endoplasmic reticulum 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400009253	Potato	cytosol	42.52	20.69
PGSC0003DMT400000378	Potato	cytosol	41.73	20.23
GSMUA_Achr7P10170_001	Banana	cytosol	77.17	18.15
PGSC0003DMT400026602	Potato	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, vacuole	41.73	17.32
Solyc08g066790.2.1	Tomato	plastid	94.49	14.87
PGSC0003DMT400024831	Potato	extracellular	94.49	14.87
PGSC0003DMT400073469	Potato	cytosol	78.74	12.36
HORVU3Hr1G024530.2	Barley	plastid	75.59	11.82
TraesCS3D01G130900.1	Wheat	golgi	75.59	11.82
Zm00001d008727_P002	Maize	cytosol	74.8	11.7
TraesCS3B01G149100.1	Wheat	unclear	74.8	11.7
KXG31749	Sorghum	cytosol	74.02	11.58
TraesCS3A01G130000.1	Wheat	plastid	74.02	11.58
PGSC0003DMT400001650	Potato	cytosol, plastid	73.23	11.47
Zm00001d039670_P004	Maize	cytosol	72.44	11.33
Os01t0172400-03	Rice	plastid	71.65	11.21
EES17463	Sorghum	cytosol	70.08	10.95
Os05t0171000-01	Rice	plasma membrane	68.5	10.56
TraesCS1D01G116700.1	Wheat	cytosol	67.72	10.55
OQU77524	Sorghum	plastid	67.72	10.47
TraesCS1A01G115300.1	Wheat	cytosol	66.93	10.43
TraesCS1B01G135200.1	Wheat	cytosol	66.93	10.39
HORVU1Hr1G025370.1	Barley	cytosol	69.29	10.29
PGSC0003DMT400020297	Potato	cytosol	62.2	9.65
Zm00001d037643_P001	Maize	cytosol	67.72	9.49
PGSC0003DMT400006661	Potato	cytosol	40.94	9.04
GSMUA_Achr10P...	Banana	cytosol, plastid	31.5	8.75
PGSC0003DMT400025590	Potato	cytosol	46.46	7.27
PGSC0003DMT400011523	Potato	cytosol	46.46	6.89
PGSC0003DMT400058531	Potato	plastid	40.16	6.01
PGSC0003DMT400009250	Potato	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:PGSC0003DMT400024828	EnsemblPlantsGene:PGSC0003DMG400009598	InterPro:PLipase_D_C	InterPro:PLipase_D_fam	KEGG:00564+3.1.4.4	KEGG:00565+3.1.4.4
PANTHER:PTHR18896	PANTHER:PTHR18896:SF85	PFAM:PF12357	PGSC:PGSC0003DMG400009598	UniParc:UPI000296E1EF	UniProt:M1AKN5
MapMan:50.3.1	:	:	:	:	:

Description

Phospholipase D [Source:PGSC_GENE;Acc:PGSC0003DMG400009598]

Coordinates

chr8:+:39564614..39565316

Molecular Weight (calculated)

14279.2 Da

IEP (calculated)

5.533

GRAVY (calculated)

-0.280

Length

127 amino acids

Sequence
(BLAST)

001: MDGARDSEIA MGAYQPFHLC VKEPARGQVH GFRMALWYEH LGMLDNRFLQ PESVECIRKV NKIGDKYWDM YSSGNLIHDL PGHLLTYPIG ITENGEITEL
101: PGVECFPDTK APVLGTKSNY LPPILTT

Best Arabidopsis Sequence Match ( AT1G52570.1 )
(BLAST)

001: MEECLLHGRL HATIYEVDHL HAEGGRSGFL GSILANVEET IGVGKGETQL YATIDLEKAR VGRTRKITKE PKNPKWFESF HIYCGHMAKH VIFTVKDANP
101: IGATLIGRGY IPVEDILHGE EVDRWVDILD NEKNPIAGGS KIHVKLQYFG VEKDKNWNRG IKSAKFPGVP YTFFSQRRGC KVSLYQDAHI PGNFVPKIPL
201: AGGKNYEPHR CWEDIFDAIT NAKHLIYITG WSVYTEISLV RDSRRPKQGG DVTVGELLKK KASEGVKVIL LVWDDRTSVD LLKKDGLMAT HDEETENFFR
301: GTDVNCILCP RNPDDGGSIV QNLQISTMFT HHQKIVVVDS EMPSGGSRSR RIVSFVGGLD LCDGRYDTPF HSLFRTLDTA HHDDFHQPNF TGAAITKGGP
401: REPWHDIHCR LEGPIAWDVL YNFEQRWSRQ GGKDILVKMR ELGDIIIPPS PVLFSEDHDV WNVQLFRSID GGAAAGFPDS PEAAAEAGLV SGKDNIIDRS
501: IQDAYIHAIR RAKDFIYIEN QYFLGSSFAW SADGIKPEEI NALHLIPKEL SLKIVSKIKA GEKFKVYVVV PMWPEGIPES GSVQAILDWQ KRTMEMMYKD
601: VIKALRENGL EGEDPRDYLT FFCLGNREVK KDGEYEPSEK PEPDTDYIRA QEARRFMIYV HTKMMIVDDE YIIIGSANIN QRSMDGARDS EIAMGGYQPY
701: HLSTRQPARG QIHGFRMSLW YEHLGMLDET FLDPSSQECI QKVNRVADKY WDLYSSESLE HDLPGHLLRY PIGIASEGNI TELPGCEFFP DTKARILGVK
801: SDYMPPILTT

Arabidopsis Description

PLDALPHA2Phospholipase D alpha 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SSQ9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.