Factsheet for Zm00001d039670_P004

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
iPSORT:	plastid
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG31749	Sorghum	cytosol	96.31	96.31
Zm00001d008727_P002	Maize	cytosol	95.94	95.94
EES17463	Sorghum	cytosol	92.0	91.88
Os01t0172400-03	Rice	plastid	90.39	90.39
HORVU3Hr1G024530.2	Barley	plastid	89.9	89.9
TraesCS3A01G130000.1	Wheat	plastid	89.78	89.78
TraesCS3B01G149100.1	Wheat	unclear	89.66	89.66
TraesCS3D01G130900.1	Wheat	golgi	89.66	89.66
KRH44445	Soybean	cytosol	79.06	81.47
KRH47460	Soybean	cytosol	81.16	81.46
KRH23570	Soybean	endoplasmic reticulum	80.91	81.41
VIT_09s0002g06760.t01	Wine grape	cytosol	80.67	80.67
AT3G15730.1	Thale cress	cytosol	77.59	77.78
CDX97705	Canola	cytosol	77.22	77.41
Bra027209.1-P	Field mustard	cytosol	77.22	77.41
CDY30108	Canola	cytosol	77.09	77.28
AT1G52570.1	Thale cress	cytosol	76.97	77.16
CDY21865	Canola	cytosol	76.97	76.97
Bra040960.1-P	Field mustard	cytosol	76.85	76.85
CDY47540	Canola	cytosol	76.72	76.72
Bra021132.1-P	Field mustard	cytosol	76.35	76.35
PGSC0003DMT400024831	Potato	extracellular	75.74	76.21
Solyc08g066800.2.1	Tomato	plastid	75.74	76.21
CDY60551	Canola	cytosol	75.74	75.74
KRH09736	Soybean	cytosol, endoplasmic reticulum, nucleus	66.26	75.67
Bra030375.1-P	Field mustard	cytosol	75.62	75.62
CDY20149	Canola	cytosol, nucleus, peroxisome	19.83	75.59
Solyc08g066790.2.1	Tomato	plastid	74.01	74.47
PGSC0003DMT400024828	Potato	cytosol	11.33	72.44
Zm00001d046508_P001	Maize	cytosol, mitochondrion, plasma membrane	71.67	71.32
CDY63527	Canola	cytosol	29.31	71.26
CDX87920	Canola	cytosol	29.93	70.85
GSMUA_Achr10P...	Banana	cytosol, plastid	39.78	70.68
CDY20148	Canola	cytosol, peroxisome, plastid	34.73	70.68
Zm00001d037643_P001	Maize	cytosol	77.83	69.76
KRH09735	Soybean	cytosol	38.67	67.67
Zm00001d029397_P001	Maize	cytosol, mitochondrion, peroxisome	63.55	60.21
Zm00001d006262_P001	Maize	cytoskeleton, cytosol, peroxisome	10.1	53.25
Zm00001d023573_P002	Maize	plastid	23.65	53.04
Zm00001d005770_P001	Maize	cytosol	46.67	50.07
Zm00001d006257_P009	Maize	cytosol	48.03	45.56
Zm00001d027386_P002	Maize	cytosol	45.2	44.0
Zm00001d050470_P001	Maize	mitochondrion	21.55	43.97
Zm00001d015818_P002	Maize	cytosol, nucleus, peroxisome	14.9	43.68
Zm00001d005484_P003	Maize	cytosol	46.43	43.38
Zm00001d022594_P002	Maize	cytosol	45.57	41.81
Zm00001d015256_P001	Maize	cytosol	20.07	39.37
Zm00001d015033_P001	Maize	extracellular, plastid, vacuole	44.95	39.21
Zm00001d029684_P001	Maize	peroxisome	45.32	35.11
Zm00001d009075_P001	Maize	cytosol, nucleus, peroxisome	22.04	18.86
Zm00001d037946_P001	Maize	cytosol, mitochondrion, nucleus, peroxisome	26.23	18.38

Protein Annotations

KEGG:00564+3.1.4.4	KEGG:00565+3.1.4.4	Gene3D:2.60.40.150	Gene3D:3.30.870.10	MapMan:5.7.2.4.1	EntrezGene:542702
EMBL:BT061203	EMBL:BT063230	EMBL:BT063662	EMBL:BT064376	UniProt:C0HFU7	InterPro:C2_dom
InterPro:C2_domain_sf	GO:GO:0003674	GO:GO:0003824	GO:GO:0004630	GO:GO:0005488	GO:GO:0005509
GO:GO:0005575	GO:GO:0006629	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987
GO:GO:0016020	GO:GO:0016042	GO:GO:0016787	GO:GO:0046470	GO:GO:0070290	InterPro:IPR000008
InterPro:IPR001736	InterPro:IPR035892	ProteinID:ONM29631.1	ProteinID:ONM29633.1	ProteinID:ONM29634.1	ProteinID:ONM29636.1
ProteinID:ONM29637.1	ProteinID:ONM29638.1	ProteinID:ONM29639.1	ProteinID:ONM29640.1	ProteinID:ONM29641.1	ProteinID:ONM29643.1
PFAM:PF00168	PFAM:PF00614	PFAM:PF12357	PIRSF:PIRSF036470	InterPro:PLipase_D/transphosphatidylase	InterPro:PLipase_D_C
InterPro:PLipase_D_fam	InterPro:PLipase_D_pln	PFscan:PS50035	PANTHER:PTHR18896	PANTHER:PTHR18896:SF109	SMART:SM00155
SMART:SM00239	SUPFAM:SSF49562	SUPFAM:SSF56024	UniParc:UPI0001948A13	EnsemblPlantsGene:Zm00001d039670	EnsemblPlants:Zm00001d039670_P004
EnsemblPlants:Zm00001d039670_T004	SEG:seg	:	:	:	:

Description

phospholipase D1 phospholipase D1

Coordinates

chr3:+:11500060..11504969

Molecular Weight (calculated)

92289.5 Da

IEP (calculated)

5.314

GRAVY (calculated)

-0.440

Length

812 amino acids

Sequence
(BLAST)

001: MAQILLHGTL HATIFEAESL SNPHRATGGA PKFIRKLVEG IEDTVGVGKG ATKIYATVDL EKARVGRTRM ISNEPVNPRW YESFHIYCAH MAADVIFTVK
101: IDNSIGASLI GRAYLPVQDL LGGEEIDKWL EICDENREPV GDSKIHVKLQ YFDVGKDRNW ARGVRSTKYP GVPYTFFSQR QGCKVTLYQD AHVPDNFVPR
201: IQLADGKNYE PHRCWEDIFD AISKAQHLIY ITGWSVYTEI TLVRDTNRPK PGGDVTLGEL LKRKASEGVR VLMLVWDDRT SVGLLKKDGL MATHDEETAN
301: YFHGTDVNCV LCPRNPDDSG SFVQDLQIST MFTHHQKIVV VDHEMPNQGS QQRRIVSFIG GIDLCDGRYD TQYHSLFRTL DTVHHDDFHQ PNFEGGSIKK
401: GGPREPWHDI HSRLEGPIAW DVLYNFEQRW RKQGGKDLLV RLRDLPDIII PPSPVMFPED RETWNVQLFR SIDGGAAFGF PETPEEAARA GLVSGKDQII
501: DRSIQDAYVN AIRRAKNFIY IENQYFLGSS YGWKPEGIKP EEIGALHLIP KELSLKIVSK IEAGERFTVY VVVPMWPEGV PESASVQAIL DWQRRTMEMM
601: YTDIAQALEA NGIEANPKDY LTFFCLGNRE VKQEGEYEPE EHPEPDTDYI RAQEARRFMI YVHTKMMIVD DEYIIIGSAN INQRSMDGAR DSEIAMGAYQ
701: PYHLATRQPA RGQIHGFRMS LWYEHLGMLE DVFQRPESVE CVQKVNEVAE KYWDLYSSDD LEQDLPGHLL SYPIGVTADG SVTELPGMEN FPDTRARVLG
801: NKSDYLPPIL TT

Best Arabidopsis Sequence Match ( AT1G52570.1 )
(BLAST)

001: MEECLLHGRL HATIYEVDHL HAEGGRSGFL GSILANVEET IGVGKGETQL YATIDLEKAR VGRTRKITKE PKNPKWFESF HIYCGHMAKH VIFTVKDANP
101: IGATLIGRGY IPVEDILHGE EVDRWVDILD NEKNPIAGGS KIHVKLQYFG VEKDKNWNRG IKSAKFPGVP YTFFSQRRGC KVSLYQDAHI PGNFVPKIPL
201: AGGKNYEPHR CWEDIFDAIT NAKHLIYITG WSVYTEISLV RDSRRPKQGG DVTVGELLKK KASEGVKVIL LVWDDRTSVD LLKKDGLMAT HDEETENFFR
301: GTDVNCILCP RNPDDGGSIV QNLQISTMFT HHQKIVVVDS EMPSGGSRSR RIVSFVGGLD LCDGRYDTPF HSLFRTLDTA HHDDFHQPNF TGAAITKGGP
401: REPWHDIHCR LEGPIAWDVL YNFEQRWSRQ GGKDILVKMR ELGDIIIPPS PVLFSEDHDV WNVQLFRSID GGAAAGFPDS PEAAAEAGLV SGKDNIIDRS
501: IQDAYIHAIR RAKDFIYIEN QYFLGSSFAW SADGIKPEEI NALHLIPKEL SLKIVSKIKA GEKFKVYVVV PMWPEGIPES GSVQAILDWQ KRTMEMMYKD
601: VIKALRENGL EGEDPRDYLT FFCLGNREVK KDGEYEPSEK PEPDTDYIRA QEARRFMIYV HTKMMIVDDE YIIIGSANIN QRSMDGARDS EIAMGGYQPY
701: HLSTRQPARG QIHGFRMSLW YEHLGMLDET FLDPSSQECI QKVNRVADKY WDLYSSESLE HDLPGHLLRY PIGIASEGNI TELPGCEFFP DTKARILGVK
801: SDYMPPILTT

Arabidopsis Description

PLDALPHA2Phospholipase D alpha 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SSQ9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.