Factsheet for Zm00001d029684_P001

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

plastid 1
peroxisome 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome
Any Predictor:	mitochondrion, peroxisome, plastid
iPSORT:	plastid
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	peroxisome

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d013757_P010
Zm00001d033159_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G11850.1	Zm00001d013757_P010	AT4G26630.1	25387881
AT4G11850.1	Zm00001d033159_P001	AT4G26630.1	25387881

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER92041	Sorghum	cytosol, nucleus, peroxisome	95.8	95.35
Os10t0524400-01	Rice	plasma membrane	82.06	82.22
Zm00001d027386_P002	Maize	cytosol	59.73	75.06
PGSC0003DMT400000378	Potato	cytosol	18.7	74.81
PGSC0003DMT400026602	Potato	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, vacuole	21.66	74.18
GSMUA_Achr8P12030_001	Banana	plastid	56.68	73.88
Zm00001d050470_P001	Maize	mitochondrion	26.81	70.6
CDY13283	Canola	mitochondrion	23.57	69.97
CDY41006	Canola	mitochondrion	10.4	69.87
KRG89825	Soybean	cytoskeleton, cytosol, peroxisome	19.08	68.73
PGSC0003DMT400058531	Potato	plastid	54.96	67.84
Solyc08g080130.2.1	Tomato	nucleus	54.48	67.49
Bra000752.1-P	Field mustard	cytosol, nucleus, peroxisome	33.87	67.49
GSMUA_Achr5P20150_001	Banana	cytosol	63.93	67.2
Bra022740.1-P	Field mustard	cytosol, extracellular	8.02	66.67
CDY28756	Canola	cytosol, extracellular	8.02	66.67
VIT_02s0025g04620.t01	Wine grape	cytosol	53.63	66.12
CDX86742	Canola	cytosol	52.96	65.53
Bra014871.1-P	Field mustard	cytosol	52.86	65.41
KRH77467	Soybean	nucleus	52.48	64.48
Solyc01g091910.2.1	Tomato	plastid	55.06	64.47
AT4G11850.1	Thale cress	cytosol	52.77	64.45
AT4G00240.1	Thale cress	cytosol	56.68	64.08
CDX90066	Canola	cytosol	59.26	63.76
CDX90807	Canola	cytosol	48.85	63.44
CDY64184	Canola	mitochondrion	49.14	63.19
AT4G11840.1	Thale cress	cytosol	51.72	62.59
AT4G11830.2	Thale cress	cytosol	51.05	62.5
Zm00001d015818_P002	Maize	cytosol, nucleus, peroxisome	16.41	62.09
KRH65182	Soybean	cytosol	44.27	61.13
CDX90808	Canola	cytosol	46.18	60.96
CDY52961	Canola	cytosol, nucleus, peroxisome	57.63	60.89
Bra000753.1-P	Field mustard	cytosol	46.09	60.83
CDY54926	Canola	cytosol, nucleus, peroxisome	57.82	60.42
CDY15144	Canola	peroxisome	60.59	59.68
Bra033225.1-P	Field mustard	cytosol	60.88	59.63
CDY13284	Canola	cytosol	25.95	59.26
KRH48290	Soybean	nucleus	58.68	58.74
Zm00001d006262_P001	Maize	cytoskeleton, cytosol, peroxisome	8.59	58.44
VIT_15s0048g01160.t01	Wine grape	cytosol	60.59	58.42
KRG93706	Soybean	nucleus	16.13	58.08
KRH01625	Soybean	cytosol	60.4	57.7
Zm00001d015256_P001	Maize	cytosol	22.52	57.0
KRH77470	Soybean	cytosol	7.44	56.93
AT2G42010.2	Thale cress	peroxisome	59.92	56.68
KRH70487	Soybean	cytosol	59.64	56.51
KRH77469	Soybean	nucleus	3.72	55.71
CDY46254	Canola	cytosol	5.06	54.64
Solyc10g017650.1.1	Tomato	cytosol	57.44	53.8
Zm00001d006257_P009	Maize	cytosol	42.56	52.1
Zm00001d022594_P002	Maize	cytosol	41.7	49.38
Zm00001d005484_P003	Maize	cytosol	40.36	48.68
Zm00001d039670_P004	Maize	cytosol	35.11	45.32
Zm00001d046508_P001	Maize	cytosol, mitochondrion, plasma membrane	35.11	45.1
Zm00001d008727_P002	Maize	cytosol	34.54	44.58
Zm00001d015033_P001	Maize	extracellular, plastid, vacuole	38.36	43.18
Bra008515.1-P	Field mustard	mitochondrion, plastid	58.11	42.0
Zm00001d029397_P001	Maize	cytosol, mitochondrion, peroxisome	33.02	40.37
Zm00001d005770_P001	Maize	cytosol	28.82	39.89
Zm00001d037643_P001	Maize	cytosol	34.06	39.4
Zm00001d023573_P002	Maize	plastid	13.45	38.95
Zm00001d009075_P001	Maize	cytosol, nucleus, peroxisome	16.98	18.76
Zm00001d037946_P001	Maize	cytosol, mitochondrion, nucleus, peroxisome	19.18	17.34

Protein Annotations

KEGG:00564+3.1.4.4	KEGG:00565+3.1.4.4	EntrezGene:100501678	Gene3D:2.60.40.150	Gene3D:3.30.870.10	MapMan:5.7.2.4.2
UniProt:A0A1D6K719	InterPro:C2_dom	InterPro:C2_domain_sf	ncoils:Coil	GO:GO:0003674	GO:GO:0003824
InterPro:IPR000008	InterPro:IPR001736	InterPro:IPR035892	ProteinID:ONL99358.1	PFAM:PF00168	PFAM:PF00614
PFAM:PF12357	PFAM:PF13091	InterPro:PLD-like_dom	InterPro:PLipase_D/transphosphatidylase	InterPro:PLipase_D_C	InterPro:PLipase_D_fam
PRINTS:PR01217	PFscan:PS50004	PFscan:PS50035	PANTHER:PTHR18896	PANTHER:PTHR18896:SF65	SMART:SM00155
SMART:SM00239	SUPFAM:SSF49562	SUPFAM:SSF56024	UniParc:UPI000221FAA5	EnsemblPlantsGene:Zm00001d029684	EnsemblPlants:Zm00001d029684_P001
EnsemblPlants:Zm00001d029684_T001	SEG:seg	:	:	:	:

Description

phospholipase D9 phospholipase D9

Coordinates

chr1:-:82569590..82575849

Molecular Weight (calculated)

116485.0 Da

IEP (calculated)

7.305

GRAVY (calculated)

-0.453

Length

1048 amino acids

Sequence
(BLAST)

0001: MENGNNGGNP PHYPPYQYPY PQAQAQLYPY GYQYPPAPPS PSPSAAPAGP YLSPSPSFPS YAPAPHPPQQ FHSGPLQAYP PPPQYHAYPP PPHPSPYGHG
0101: YDPYPSPYFS YPSTNPSPSP SPGLSPSSSF HHQHASAPEP PSPAPSAPSA PSYPIEDVLA SMRLSGRHDY ASSPSVTPPS TPFLGDGSSH GGGMQLVPYG
0201: TAAGGSQHGG GMQVVPYGAA AGGSQHGGSF RASLKVVLLH GSLDIWVHDA RHLPNKDMFS KRVGELLGPR ITSAVGSKMS SASMTSDPYV TVQVSYATVA
0301: RTYVIPNCEN PVWSQNFMVP VGHEAAEVQF VVKDSDVFGA QIIGVVSIPA EKLLTGDRIQ GVFPVLEPNG KPCAPGAVLH LSIQLIPVAQ LTMYHHGVIA
0401: GPDSHGVPHT YFPLRRGMRV TLYQDAHVPD GCLPDIWLSN GLRYQHGQCW RDIYDAICQA RKLIYIVGWS VFHTIHLVRD GTQAPSLGDL LKMKSQEGVR
0501: VLLLVWDDPT SRSILGYKMD GFMGTRDEET RRFFKHSSVQ VLLCPRSAGK RHSWVKQQET GTIFTHHQKT VIVDADAGNY RRKIVAFVGG LDLCGGRYDT
0601: PWHPLFRTLQ NEHKEDYYNP NFNTVDARGP REPWHDLHSK IDGPAAYDVL QNFQERWLKA AKRHGIKKLA KSYDDALLTI ERIPEIININ DAIYFSDNDP
0701: ETWHVQVFRS IDSNSAKGFP KDPRAATMKN LVCGKNVLID MSIHTAYVHA IRSAQHYIYI ENQYFIGSSF NWDSNKDLGA NNLIPIEIAL KIANKIKANE
0801: RFSAYIVVPM WPEGNPTGAA TQRILYWQNK TMQMMYETIY RTLKEEGLDD MYEPQDYLNF FCLGNREVAD STSTSNASNT ANNPQEQARK NRRFMVYVHS
0901: KGMIVDDEYV IIGSANINQR SMEGIRDTEI AMGAYQPQYT WANKLSAPRG QIYGYRMSLW AEHIGSIEED FNYPESLECM RRVRHLGEEN WKQFVADEVT
1001: EMRGHLMKYP VSVDRKGKVK PLPGCTTFPD MGGNICGSFV AIQENLTI

Best Arabidopsis Sequence Match ( AT2G42010.1 )
(BLAST)

0001: MDNHGPRYPY PYGQYPYPYP YPAPYRPPSS EPYPPPPTNQ YSAPYYPYPP PPYATPPPYA SPPPPHQHTS GSHSGPLDYS HNPQPSSLAA APPEYHRHSF
0101: DYQPSPYPYQ PQGNFGAYGP PPPHYSYQEP AQYPPPETKP QEPLPPPQQT QGFQEYRRQD CLSTGGTGHD NVSNSGSSYP PVDELLGGLH ISTNQPGPSV
0201: PQLSSLPSNS WQSRPGDLYG YPNSSFPSNS HLPQLGRVDS SSSYYASTES PHSADMQMTL FGKGSLKVLL LHGNLDIWIY HAKNLPNMDM FHKTLGDMFG
0301: RLPGKIEGQL TSKITSDPYV SVSVAGAVIG RTYVMSNSEN PVWMQHFYVP VAHHAAEVHF VVKDSDVVGS QLIGLVTIPV EQIYSGAKIE GTYPILNSNG
0401: KPCKPGANLS LSIQYTPMDK LSVYHHGVGA GPDYQGVPGT YFPLRKGGTV RLYQDAHVPE GMLPGIRLDN GMSYEHGKCW HDMFDAIRQA RRLIYITGWS
0501: VWHKVKLIRD KLGPASECTL GELLRSKSQE GVRVLLLIWD DPTSRSILGY KTDGVMATHD EETRRFFKHS SVQVLLCPRN AGKRHSWVKQ REVGTIYTHH
0601: QKNVIVDADA GGNRRKIIAF VGGLDLCDGR YDTPQHPLFR TLQTIHKDDF HNPTFTGNLS GCPREPWHDL HSKIDGPAAY DVLTNFEERW LKAAKPSGIK
0701: KFKTSYDDAL LRIDRIPDIL GVSDTPTVSE NDPEAWHVQI FRSIDSNSVK GFPKDPKDAT CKNLVCGKNV LIDMSIHTAY VKAIRAAQHF IYIENQYFIG
0801: SSYNWNAHKD IGANNLIPME IALKIAEKIR ANERFAAYIV IPMWPEGVPT GAATQRILYW QHKTIQMMYE TIYKALVETG LEGAFSPQDY LNFFCLGNRE
0901: MVDGIDNSGT GSPSNANTPQ ALSRKSRRFM VYVHSKGMVV DDEYVVIGSA NINQRSMEGT RDTEIAMGAY QPQHTWARKH SGPRGQIYGY RMSLWAEHMA
1001: TLDDCFTQPE SIECVRKVRT MGERNWKQFA AEEVSDMRGH LLKYPVEVDR KGKVRPLPGS ETFPDVGGNI VGSFIAIQEN LTI

Arabidopsis Description

PLDBETA1phospholipase D beta 1 [Source:TAIR;Acc:AT2G42010]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.