CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, nucleus, cytosol

Predictor Summary:

nucleus 2
plastid 1
peroxisome 1
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, peroxisome
Any Predictor:	cytosol, nucleus, peroxisome
BaCelLo:	nucleus
iPSORT:	plastid
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY54926	Canola	cytosol, nucleus, peroxisome	98.19	97.11
AT4G00240.1	Thale cress	cytosol	80.14	85.76
PGSC0003DMT400026602	Potato	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, vacuole	24.29	78.76
CDX90066	Canola	cytosol	75.81	77.21
PGSC0003DMT400000378	Potato	cytosol	20.06	75.95
CDY15144	Canola	peroxisome	78.93	73.59
KRG89825	Soybean	cytoskeleton, cytosol, peroxisome	20.77	70.79
Solyc01g091910.2.1	Tomato	plastid	63.51	70.39
TraesCS1B01G195200.1	Wheat	cytosol	57.36	70.25
TraesCS1D01G189300.1	Wheat	cytosol	57.26	70.12
CDY41006	Canola	mitochondrion	10.99	69.87
GSMUA_Achr8P12030_001	Banana	plastid	56.35	69.53
CDY13283	Canola	mitochondrion	24.4	68.56
CDY28756	Canola	cytosol, extracellular	8.57	67.46
KRH65182	Soybean	cytosol	51.51	67.33
TraesCS1A01G365100.2	Wheat	mitochondrion	56.15	67.27
TraesCS1B01G382600.1	Wheat	mitochondrion	56.05	67.15
Bra008515.1-P	Field mustard	mitochondrion, plastid	97.68	66.83
TraesCS1D01G370600.1	Wheat	cytosol	55.75	66.79
CDX86742	Canola	cytosol	56.75	66.47
Os03t0119100-01	Rice	plasma membrane	55.54	65.99
HORVU1Hr1G079150.1	Barley	cytosol	54.94	65.82
KXG40331	Sorghum	cytosol	54.44	65.38
CDX90807	Canola	cytosol	52.72	64.81
Zm00001d027386_P002	Maize	cytosol	54.23	64.51
HORVU4Hr1G085550.2	Barley	cytosol	54.03	64.5
KRH48290	Soybean	nucleus	67.94	64.37
TraesCS4D01G346700.1	Wheat	cytosol	53.83	64.26
VIT_15s0048g01160.t01	Wine grape	cytosol	70.16	64.03
KRH01625	Soybean	cytosol	70.56	63.81
CDY64184	Canola	mitochondrion	52.42	63.8
TraesCS5A01G520900.1	Wheat	cytosol	53.33	63.66
KRH70487	Soybean	cytosol	70.97	63.65
CDY51545	Canola	cytosol	9.17	63.64
GSMUA_Achr4P24890_001	Banana	cytosol, plastid	55.75	62.49
CDX90808	Canola	cytosol	50.0	62.47
CDY13284	Canola	cytosol	28.83	62.31
GSMUA_Achr5P20150_001	Banana	cytosol	62.0	61.69
TraesCS4B01G352300.1	Wheat	cytosol	53.23	61.61
Zm00001d050470_P001	Maize	mitochondrion	24.7	61.56
Os10t0524400-01	Rice	plasma membrane	60.99	57.84
EER92041	Sorghum	cytosol, nucleus, peroxisome	61.29	57.74
Solyc10g017650.1.1	Tomato	cytosol	65.12	57.73
Zm00001d029684_P001	Maize	peroxisome	60.89	57.63
Zm00001d015818_P002	Maize	cytosol, nucleus, peroxisome	15.62	55.96
TraesCS1A01G187400.1	Wheat	peroxisome	61.9	55.47
HORVU1Hr1G048970.1	Barley	cytosol, nucleus, peroxisome	62.0	55.46
Zm00001d015256_P001	Maize	cytosol	22.18	53.14
CDY46254	Canola	cytosol	5.04	51.55
CDY67335	Canola	cytosol	44.25	50.69
CDY41630	Canola	cytosol	44.25	50.63
CDX72557	Canola	cytosol	43.55	49.94
CDY35793	Canola	cytosol	43.25	49.6
CDX80734	Canola	cytosol	6.05	49.59
CDY47037	Canola	cytosol	43.95	49.27
CDY20149	Canola	cytosol, nucleus, peroxisome	9.88	46.01
CDY30108	Canola	cytosol	37.4	45.8
CDX97705	Canola	cytosol	37.4	45.8
CDX80505	Canola	cytosol	35.99	45.77
CDX88175	Canola	cytosol	34.17	45.75
CDY47540	Canola	cytosol	37.3	45.57
CDY60551	Canola	cytosol	37.2	45.44
CDY70643	Canola	cytosol, peroxisome	9.68	45.07
CDY05351	Canola	cytosol	36.79	44.79
CDY21865	Canola	cytosol	36.59	44.7
CDY05490	Canola	cytosol	36.59	44.54
CDY63527	Canola	cytosol	13.81	41.02
CDY20148	Canola	cytosol, peroxisome, plastid	16.23	40.35
CDX87920	Canola	cytosol	13.91	40.23
CDY24051	Canola	cytosol	30.24	39.58
CDY33065	Canola	cytosol	30.04	39.31
CDY42882	Canola	nucleus	10.79	33.23
CDY18811	Canola	cytosol, nucleus, peroxisome	19.25	18.24
CDX92096	Canola	nucleus	19.05	17.47
CDX95904	Canola	cytosol, nucleus, peroxisome	19.05	17.37
CDY51604	Canola	cytosol	1.71	6.03

Protein Annotations

KEGG:00564+3.1.4.4	KEGG:00565+3.1.4.4	Gene3D:2.60.40.150	Gene3D:3.30.870.10	MapMan:5.7.2.4.2	GO:A0A078IT23
UniProt:A0A078IT23	InterPro:C2_dom	InterPro:C2_domain_sf	EnsemblPlants:CDY52961	ProteinID:CDY52961	ProteinID:CDY52961.1
GO:GO:0003674	GO:GO:0003824	EnsemblPlantsGene:GSBRNA2T00008228001	InterPro:IPR000008	InterPro:IPR001736	InterPro:IPR035892
PFAM:PF00168	PFAM:PF00614	PFAM:PF12357	InterPro:PLipase_D/transphosphatidylase	InterPro:PLipase_D_C	InterPro:PLipase_D_fam
PFscan:PS50004	PFscan:PS50035	PANTHER:PTHR18896	PANTHER:PTHR18896:SF65	MetaCyc:PWY-3561	MetaCyc:PWY-7039
SMART:SM00155	SMART:SM00239	SUPFAM:SSF49562	SUPFAM:SSF56024	UniParc:UPI0004EE2D83	SEG:seg

Description

BnaCnng23890DBnaCnng23890D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IT23]

Coordinates

chrLK033146:+:5258..9628

Molecular Weight (calculated)

111299.0 Da

IEP (calculated)

7.561

GRAVY (calculated)

-0.518

Length

992 amino acids

Sequence
(BLAST)

001: MENYGPPPPP NSDPYPPQAY PPPLHNQYGS MSHSGPLDYA HRPPPPLHHH YGSMSPSGPP PHYSYDHQHQ PHPPQQPTLQ PHARFASYPP PPQHPHHDNF
101: SSAGYSSPPV YPPLHDLMGG LTVSSHHHPP SSNPGSYHGQ QPYHSFSSHS HLSHSGRLDS PLPHSPSLQI VPSGKPSLKV LLLHGNLDIW IYRANNLPNM
201: DLFHNTLGAV FGSISNMIEG QLCKKITSDP YVSISVAGAV IGRTYVMSNS ENPVWHQHFY VPVAHHAAEV HFVVKDSDVV GSQLIGLVTI PVEQIHSGAR
301: IEGTYSILSS NGKPCKPGAT LTLSIQYTSA DKLSVYHSGV GGGPSYQGVP GTYFPLREGG NVTLYQDAHV PEGMLPRIRL GNGMYYENGK CWHDMFHAIC
401: QARRLIYITG WSVWHNVRLA RDKGNPASEC TLGELLKSKS REGVRVLLLV WDDPTSRDIL GYKTDGVMGT HDEETRRFFK HSSVQILLCP RNAGKRHSWV
501: KQTEVGTIYT HHQKTLIVDA DAGGNRRKIV AFVGGLDLCD GRYDTPQHPL FRTLQTDHKG DYHNPTFTGN LSGCPREPWH DLHSKIDGPA AYDVLTNLEE
601: RWLKAAKPHR INKLKTSYDD ALLRIERIPD ILGVFDAPTV SANDPEAWHV QIFRSIDSNS VKGFPKDPKY ATSKNLMCGK NVLIDMSIHT AYVKAIRAAQ
701: HFIYIENQYF IGSSYNWNAH KDIGANNLIP MEIALKIADK IRANERFAVY IVIPMWPEGV PTGAATQRIL YWQHKTMQMM YGTIYNALVE AGLDDRFSPQ
801: DYLNFFCLGN REMVDGNNET NQSNENTPQA SCRKSRRFMI YVHSKGMVID DEYVVIGSAN INQRSMEGTR DTEIAMGAYQ PQHTWARRQS GPRGQIFGYR
901: MSLWAEHMAM LDDSFEEPES LECVSKVRRM GEENWKQFRA EQVSEMRGHL LKYPVEVDRR CKVRPLPGSE EFPDVGGNIV GSFLAIQENL TI

Best Arabidopsis Sequence Match ( AT4G00240.1 )
(BLAST)

001: MENYGWNYPY YPYRPPRPNP PYPAPPHHHG SMSHSGPLDH HHPPMSYYAS FDYQHQPPPP YPPVSYYASF SSHSDLSYSG RLDSSGHGFT STASPHSPGM
101: HIVPFGKASL KVLLLHGNLD IWVSCANNLP NLDLFHKTLG VVFGGMTNMI EGQLSKKITS DPYVSISVAG AVIGRTYVIS NSENPVWQQH FYVPVAHHAA
201: EVHFVVKDSD AVGSQLIGIV TIPVEQIYSG ARIEGTYSIR DSNGKPCKPG ATLSLSIQYT SMNKLSVYHS GVGAGPYYQG VPGTYFPLRE GGSVTLYQDA
301: HVPEGMLPGI KLGNGMCYEH GKCWHDMFHA ICQARRLIYI TGWSVWHNVR LVRDKEDPSS ECRLGELLRS KSQEGVRVLL LVWDDPTSQN ILGYMTDGVM
401: GTHDEETRRF FKDSSVQVLL CPRNAGKRHS WVKQREVGTI YTHHQKNLIV DADAGGNRRK IVAFVGGLDL CDGRYDTPQH PLFRTLQTDH NGDYHNPTFT
501: GNVSGCPREP WHDLHSKIDG PAAYDVLTNF EERWLKAAKP HRINKLKTSY DDALLRIDRI PDILRVLDAP TVSANDPEAW HVQIFRSIDS NSVKGFPKDP
601: KYATSKNLVC GKNVLIDMSI HTAYVKAIRA AQHFIYIENQ YFIGSSYDWN AHKDIGANNL IPMEIALKIA DKIRAKERFA AYIVIPMWPE GVPTGAATQR
701: ILYWQHKTMQ MMYGTIYNAL VEAGLEDEYS PQDYLNFFCL GNREMVNGNN ESGTGSASNE NTPQGLCRKS RRFMIYVHSK GMVVDDEYVV IGSANINQRS
801: MEGTRDTEIA MGAYQPQHTW ARRQSGPRGQ IYGYRMSLWA EHMALLDDCF VEPESLGCVR KVRTVAEENW EQFRSEEVSE MRGHLMKYPV EVDRKGKVRP
901: LPGSEEFPDV GGNVVGSFLA IQENLTI

Arabidopsis Description

PLDBETA2Phospholipase D beta 2 [Source:UniProtKB/Swiss-Prot;Acc:O23078]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.