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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • plastid 2
  • mitochondrion 4
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:mitochondrion
Any Predictor:cytosol, mitochondrion, plastid
BaCelLo:plastid
iPSORT:mitochondrion
MultiLoc:mitochondrion
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:plastid
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX90807 Canola cytosol 84.42 85.25
CDY13283 Canola mitochondrion 34.11 78.75
CDX90808 Canola cytosol 76.07 78.09
CDY51545 Canola cytosol 13.5 76.92
CDX86742 Canola cytosol 78.04 75.09
CDY41006 Canola mitochondrion 14.23 74.36
CDY28756 Canola cytosol, extracellular 10.92 70.63
CDY13284 Canola cytosol 39.51 70.15
CDY46254 Canola cytosol 8.34 70.1
TraesCS1D01G189300.1 Wheat cytosol 63.56 63.95
TraesCS1B01G195200.1 Wheat cytosol 63.56 63.95
Solyc08g080130.2.1 Tomato nucleus 64.91 62.53
PGSC0003DMT400058531 Potato plastid 64.79 62.19
KRH77467 Soybean nucleus 65.03 62.13
VIT_02s0025g04620.t01 Wine grape cytosol 64.66 62.0
GSMUA_Achr8P12030_001 Banana plastid 60.49 61.32
TraesCS1A01G365100.2 Wheat mitochondrion 61.72 60.75
KXG40331 Sorghum cytosol 60.98 60.17
TraesCS1D01G370600.1 Wheat cytosol 61.1 60.14
TraesCS1B01G382600.1 Wheat mitochondrion 61.1 60.14
Zm00001d027386_P002 Maize cytosol 60.98 59.59
Os03t0119100-01 Rice plasma membrane 60.98 59.52
TraesCS4D01G346700.1 Wheat cytosol 60.61 59.45
HORVU4Hr1G085550.2 Barley cytosol 60.61 59.45
HORVU1Hr1G079150.1 Barley cytosol 60.0 59.06
TraesCS5A01G520900.1 Wheat cytosol 60.12 58.97
KRH77470 Soybean cytosol 9.82 58.39
TraesCS4B01G352300.1 Wheat cytosol 60.25 57.29
GSMUA_Achr4P24890_001 Banana cytosol, plastid 61.23 56.38
Zm00001d050470_P001 Maize mitochondrion 27.24 55.78
KRH77469 Soybean nucleus 4.79 55.71
KRG93706 Soybean nucleus 19.75 55.33
CDX90066 Canola cytosol 65.64 54.93
Zm00001d015818_P002 Maize cytosol, nucleus, peroxisome 18.04 53.07
CDY52961 Canola cytosol, nucleus, peroxisome 63.8 52.42
GSMUA_Achr5P20150_001 Banana cytosol 63.68 52.06
CDY54926 Canola cytosol, nucleus, peroxisome 63.8 51.84
CDY15144 Canola peroxisome 65.64 50.28
Zm00001d015256_P001 Maize cytosol 25.03 49.28
Zm00001d029684_P001 Maize peroxisome 63.19 49.14
EER92041 Sorghum cytosol, nucleus, peroxisome 63.19 48.91
Os10t0524400-01 Rice plasma membrane 61.96 48.28
CDY67335 Canola cytosol 51.29 48.27
CDY41630 Canola cytosol 50.43 47.4
TraesCS1A01G187400.1 Wheat peroxisome 63.93 47.06
CDY35793 Canola cytosol 49.69 46.82
HORVU1Hr1G048970.1 Barley cytosol, nucleus, peroxisome 63.56 46.71
CDX72557 Canola cytosol 49.57 46.71
CDY47037 Canola cytosol 50.06 46.1
CDY20149 Canola cytosol, nucleus, peroxisome 12.02 46.01
CDX80734 Canola cytosol 6.63 44.63
CDY70643 Canola cytosol, peroxisome 11.53 44.13
CDX88175 Canola cytosol 40.0 43.99
CDY30108 Canola cytosol 43.31 43.58
CDX97705 Canola cytosol 43.19 43.46
CDY47540 Canola cytosol 43.19 43.35
CDY60551 Canola cytosol 43.19 43.35
CDX80505 Canola cytosol 41.35 43.21
CDY21865 Canola cytosol 42.33 42.49
CDY05490 Canola cytosol 41.47 41.47
CDY05351 Canola cytosol 41.35 41.35
CDY24051 Canola cytosol 36.2 38.92
CDY20148 Canola cytosol, peroxisome, plastid 19.02 38.85
CDY33065 Canola cytosol 35.83 38.52
CDX87920 Canola cytosol 15.83 37.61
CDY63527 Canola cytosol 15.34 37.43
CDY42882 Canola nucleus 13.13 33.23
CDY18811 Canola cytosol, nucleus, peroxisome 22.45 17.48
CDX92096 Canola nucleus 22.82 17.19
CDX95904 Canola cytosol, nucleus, peroxisome 22.7 17.0
CDY51604 Canola cytosol 2.09 6.03
Protein Annotations
KEGG:00564+3.1.4.4KEGG:00565+3.1.4.4Gene3D:2.60.40.150Gene3D:3.30.870.10MapMan:5.7.2.4.2GO:A0A078JCN5
UniProt:A0A078JCN5InterPro:C2_domInterPro:C2_domain_sfEnsemblPlants:CDY64184ProteinID:CDY64184ProteinID:CDY64184.1
GO:GO:0003674GO:GO:0003824GO:GO:0004630GO:GO:0005488GO:GO:0005509GO:GO:0005575
GO:GO:0006629GO:GO:0008150GO:GO:0008152GO:GO:0009056GO:GO:0009987GO:GO:0016020
GO:GO:0016042GO:GO:0016787GO:GO:0046470GO:GO:0070290EnsemblPlantsGene:GSBRNA2T00040964001InterPro:IPR000008
InterPro:IPR001736InterPro:IPR035892PFAM:PF00168PFAM:PF00614PFAM:PF12357PFAM:PF13091
PIRSF:PIRSF036470InterPro:PLD-like_domInterPro:PLipase_D/transphosphatidylaseInterPro:PLipase_D_CInterPro:PLipase_D_famInterPro:PLipase_D_pln
PFscan:PS50004PFscan:PS50035PANTHER:PTHR18896PANTHER:PTHR18896:SF65MetaCyc:PWY-3561MetaCyc:PWY-7039
SMART:SM00155SMART:SM00239SUPFAM:SSF49562SUPFAM:SSF56024UniParc:UPI0004EF015FSEG:seg
Description
BnaC03g73050DPhospholipase D [Source:UniProtKB/TrEMBL;Acc:A0A078JCN5]
Coordinates
chrLK034415:+:159..4598
Molecular Weight (calculated)
92526.2 Da
IEP (calculated)
7.787
GRAVY (calculated)
-0.426
Length
815 amino acids
Sequence
(BLAST)
001: MSRKGSSNAS LRVVLLHGNL DIWVKEAKNL PNMDRFRRYK KNTTSDPYVT VSIADAKIGT TFVIDNDENP VWMQHFYVPV AHHATVVKFV VKDNDRFGSR
101: SIGDVRIPTE ELCSENRIEG LFPILGKPCE EGAVLSLAIQ YTPVERMRLY QTGVGYGNEC EGVPGTYFPL RKGGRVTLYQ DAHVEDGTLP SVDLDGGMQY
201: IHGKCWEDMA DAIRQAKNLI YITGWSVYHP VRLVRRNNDP TDSTLGDLLK EKSQEGVRVL LLVWDDRTSW NFLGHRTCGL MKTNDEETRH FFKNSSVQVI
301: ICPRSCGKGL HSFVKKTEVK TYYTHHQKTV IVDADAAQGR RKIAAFVGGL DVCKGRFDTP KHPLFTTLKT LHKDDFYNQC FGTTDDAGPR QPWHDLHSKI
401: DGPAAYDVLA NFEQRWLEAS EKRHRISIHR SSSKDALLTI DIISNIMGLL EATSVIDNDP ESWNVQVFRS IDSTSVEGFP KDSKEASARN LQCGKNLLID
501: MSIHTAYVKA IRSAQHFIYI ENQYFFGSSF NWDSHKKLGA NNLVPMEIAL KIANKIRARE DFAAYIVIPM WPEGNPTNII VQSILHYQYK TMQMMYRTIY
601: EALVEAGLDG QYVPQDYLNF FCLGTREASD ETVSKHSSQN QPKKNAKPNA AQAQPLKSGR FMIYVHSKGM IVDDEFVLIG SANINQRSLE GSRDTEIAMG
701: GYQPHHSWAK KGSRPRGQIF GYRMSLWAEH LGFLEEIFEK PENIECVRRV RRLSELNWRQ YAAEEVTEMT SHLLKYPVHV DWTGKVTSLP GCETFPDLGG
801: RIIDSGFVIK ENLTI
Best Arabidopsis Sequence Match ( AT4G11840.1 )
(BLAST)
001: MAYHPVYNET MSMGGGSSNE FGQWLDKQLV PFDTSSGSLR VELLHGNLDI WVKEAKHLPN MDGFHNTLVG GMFFGLGRRN HKVDGENSSK ITSDPYVTVS
101: ISGAVIGRTF VISNSENPVW MQHFDVPVAH SAAKVHFVVK DSDIIGSQII GAVEIPTEQL CSGNRIEGLF PILNSRGKPC KQGAVLSLSI QYIPMERMRL
201: YQKGVGFGVE CVGVPGTYFP LRKGGRVTLY QDAHVDDGTL PSVHLDGGIQ YRHGKCWEDM ADAIRRARRL IYITGWSVFH PVRLVRRNND PTQGTLGELL
301: KVKSQEGVRV LVLVWDDPTS RSLLGFSTKG LMNTSDEETR RFFKHSSVQV LLCPRYGGKG HSFIKKSEVE TIYTHHQKTM IVDAEAAQNR RKIVAFVGGL
401: DLCNGRFDTP KHPLFRTLKT IHKDDFHNPN FVTTADDGPR EPWHDLHSKI DGPAAYDVLA NFEERWMKAS KPRGIGRLRT SSDDSLLRLD RIPDIMGLSE
501: ASSANDNDPE SWHVQVFRSI DSSSVKGFPK DPKEATGRNL LCGKNILIDM SIHAAYVKAI RSAQHFIYIE NQYFLGSSFN WDSNKNLGAN NLIPMEIALK
601: IANKIRAREK FAAYIVIPMW PEGAPTSNPI QRILYWQHKT MQMMYQTIYK ALVEVGLDGQ LEPQDFLNFF CLGTREVGTR EVPDGTVSVY NSPRKPPQLN
701: AAQVQALKSR RFMIYVHSKG MVVDDEFVLI GSANINQRSL EGTRDTEIAM GGYQPHHSWA KKGSRPRGQI FGYRMSLWAE HLGFLEQEFE EPENMECVRR
801: VRQLSELNWR QYAAEEVTEM PGHLLKYPVQ VDRTGKVSSL PGYETFPDLG GKIIGSFLVV EENLTI
Arabidopsis Description
PLDGAMMA3Phospholipase D gamma 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9T052]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.