CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra010512.1-P	Field mustard	cytosol	92.73	99.5
CDY41630	Canola	cytosol	95.27	95.16
CDX72557	Canola	cytosol	78.41	78.5
CDY47037	Canola	cytosol	78.52	76.84
PGSC0003DMT400009253	Potato	cytosol	20.79	68.97
Solyc02g083340.2.1	Tomato	nucleus	66.63	66.63
KRH76589	Soybean	extracellular	66.28	66.44
KRH28860	Soybean	mitochondrion	66.4	66.4
VIT_00s0264g00100.t01	Wine grape	cytosol	66.86	66.32
GSMUA_Achr1P07360_001	Banana	cytosol	55.43	65.57
Solyc02g061850.2.1	Tomato	cytosol	64.2	65.41
PGSC0003DMT400009250	Potato	cytosol	41.11	64.38
Zm00001d006262_P001	Maize	cytoskeleton, cytosol, peroxisome	11.43	64.29
Os09t0543100-02	Rice	plasma membrane	61.2	62.06
GSMUA_AchrUn_...	Banana	cytosol	60.62	61.19
KXG36094	Sorghum	cytosol	60.39	60.88
Zm00001d006257_P009	Maize	cytosol	60.05	60.75
GSMUA_Achr1P14920_001	Banana	plastid	55.2	60.2
TraesCS5B01G336100.1	Wheat	cytosol	59.58	59.86
CDY35793	Canola	cytosol	59.7	59.77
TraesCS5A01G337100.2	Wheat	cytosol	59.35	59.63
GSMUA_Achr9P21120_001	Banana	nucleus	17.32	59.52
TraesCS5D01G341800.2	Wheat	cytosol	56.7	59.3
GSMUA_Achr11P...	Banana	cytosol	56.0	58.29
HORVU5Hr1G084740.4	Barley	plastid	47.34	57.34
Zm00001d022594_P002	Maize	cytosol	57.39	56.16
CDY28756	Canola	cytosol, extracellular	7.85	53.97
CDY51545	Canola	cytosol	8.89	53.85
CDY13283	Canola	mitochondrion	21.94	53.82
CDX90807	Canola	cytosol	49.65	53.28
CDY41006	Canola	mitochondrion	9.35	51.92
CDY64184	Canola	mitochondrion	48.27	51.29
CDX80734	Canola	cytosol	7.16	51.24
CDX86742	Canola	cytosol	50.12	51.24
CDX90808	Canola	cytosol	46.07	50.25
OQU84227	Sorghum	cytosol	51.15	48.2
Zm00001d015033_P001	Maize	extracellular, plastid, vacuole	50.58	47.05
TraesCS6A01G071700.1	Wheat	cytosol, nucleus, plastid	46.77	46.61
TraesCS6B01G096200.1	Wheat	cytosol	46.54	46.59
CDY42882	Canola	nucleus	17.32	46.58
CDY13284	Canola	cytosol	24.6	46.41
CDX90066	Canola	cytosol	51.73	46.0
HORVU6Hr1G012780.6	Barley	cytosol, nucleus, plastid	45.96	45.8
CDY46254	Canola	cytosol	5.08	45.36
CDX88175	Canola	cytosol	38.34	44.8
CDY20149	Canola	cytosol, nucleus, peroxisome	10.97	44.6
CDX80505	Canola	cytosol	39.95	44.36
CDY30108	Canola	cytosol	41.45	44.32
CDX97705	Canola	cytosol	41.45	44.32
CDY52961	Canola	cytosol, nucleus, peroxisome	50.69	44.25
CDY54926	Canola	cytosol, nucleus, peroxisome	50.81	43.87
CDY21865	Canola	cytosol	40.99	43.72
CDY47540	Canola	cytosol	40.88	43.6
CDY60551	Canola	cytosol	40.18	42.86
CDY05351	Canola	cytosol	39.95	42.45
CDY15144	Canola	peroxisome	51.73	42.11
CDY05490	Canola	cytosol	39.61	42.09
CDY70643	Canola	cytosol, peroxisome	9.82	39.91
CDY20148	Canola	cytosol, peroxisome, plastid	17.78	38.6
CDY33065	Canola	cytosol	32.91	37.6
CDY24051	Canola	cytosol	32.68	37.34
CDX87920	Canola	cytosol	14.67	37.03
CDY63527	Canola	cytosol	13.86	35.93
Os02t0120200-01	Rice	extracellular	23.44	22.31
CDY18811	Canola	cytosol, nucleus, peroxisome	22.75	18.82
CDX92096	Canola	nucleus	22.86	18.3
CDX95904	Canola	cytosol, nucleus, peroxisome	22.86	18.2
CDY51604	Canola	cytosol	2.31	7.09

Protein Annotations

KEGG:00564+3.1.4.4	KEGG:00565+3.1.4.4	Gene3D:3.30.870.10	MapMan:5.7.2.4.3	GO:A0A078JLP4	UniProt:A0A078JLP4
InterPro:C2_dom	EnsemblPlants:CDY67335	ProteinID:CDY67335	ProteinID:CDY67335.1	GO:GO:0003674	GO:GO:0003824
GO:GO:0004630	GO:GO:0005488	GO:GO:0005509	GO:GO:0005575	GO:GO:0006629	GO:GO:0008150
GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0016020	GO:GO:0016042	GO:GO:0016787
GO:GO:0046470	GO:GO:0070290	EnsemblPlantsGene:GSBRNA2T00062751001	InterPro:IPR000008	InterPro:IPR001736	PFAM:PF00168
PFAM:PF00614	PFAM:PF12357	PIRSF:PIRSF036470	InterPro:PLipase_D/transphosphatidylase	InterPro:PLipase_D_C	InterPro:PLipase_D_fam
InterPro:PLipase_D_pln	PFscan:PS50004	PFscan:PS50035	PANTHER:PTHR18896	PANTHER:PTHR18896:SF86	MetaCyc:PWY-3561
MetaCyc:PWY-7039	SMART:SM00155	SMART:SM00239	SUPFAM:SSF49562	SUPFAM:SSF56024	UniParc:UPI0004EE6C9E
SEG:seg	:	:	:	:	:

Description

BnaCnng54530DPhospholipase D [Source:UniProtKB/TrEMBL;Acc:A0A078JLP4]

Coordinates

chrLK035989:-:71..4518

Molecular Weight (calculated)

98744.6 Da

IEP (calculated)

7.066

GRAVY (calculated)

-0.458

Length

866 amino acids

Sequence
(BLAST)

001: MPENVSEDVI LLHGDLDLKI VQARRLPNRD TFSERMRRCF KPCNSCIKPT TDDYDGEASS DDDDENIRGL PRNTSDPYVT VSVPHATLAR THVLKNASDP
101: VWNRHFKVSV AHPLSYLKFK VKDYDVSGAQ TIGTVRIPVQ QIASGERISG WFPVLGGSGK PPKKETALRI DLKFTPFDKI QTNKTLGGGV MGTYFPLRKG
201: SQVRLYQDAH VMDGMLPEIR LDNGDVYQHG KCWEDICHAI CEAHHMIYIV GWSVFHKVKL VREPTRELPR GGDLTLGELL KYKSEEGVRV LLLVWDDKSS
301: RDKFGISTPG VMGTHDEETR KFFKHSSVKC ILSPRYASNK LGLFKQQAIN VVLTCHWHGW YLNQVVGTLF THHQKCVLVD TQAVGSNRKV TAFIGGIDLC
401: DGRYDTPEHR IFHDLDTVFK DDFHNPTFPS GAIAPRQPWH DMHCRLDGPA AYDVLINFEQ RWRKATRWKE FNLKGKTLWL DDSLLRIGRI SWILNPKFKY
501: RIDGVLDVPE DDPVVYVSNE DDPENWHVQV FRSIDSGSVK GFPKCENEAE ALHLQYDKRL VVDKSIQTAY IQIIRSAQHF IFIENQYFLG SSYAWPDYND
601: AGADNLIPME LALKITSKIR AKERFAVYVV IPMWPEGDPK SGPMQEILYW QSQTMQMMYD VIARELKSHQ SNAHPLDYLN FYCLGKREQL PDDMPATNVS
701: GVTDSYKFQR FMIYVHAKGM IVDDEYVLMG SANINQRSMA GTKDTEIAMG AYQPHHTWAN KGKHPRGQVY GYRMSLWAEH LGKTGDDFVE PGDLKCVKNV
801: NEIAERNWRK FIDSEFSELQ GHLIKYPLHV DIDGNVTSLP GYDSFPDVGG KIIGDHSKAI PDTLTT

Best Arabidopsis Sequence Match ( AT4G35790.1 )
(BLAST)

001: MAEKVSEDVM LLHGDLDLKI VKARRLPNMD MFSEHLRRLF TACNACARPT DTDDVDPRDK GEFGDKNIRS HRKVITSDPY VTVVVPQATL ARTRVLKNSQ
101: EPLWDEKFNI SIAHPFAYLE FQVKDDDVFG AQIIGTAKIP VRDIASGERI SGWFPVLGAS GKPPKAETAI FIDMKFTPFD QIHSYRCGIA GDPERRGVRR
201: TYFPVRKGSQ VRLYQDAHVM DGTLPAIGLD NGKVYEHGKC WEDICYAISE AHHMIYIVGW SIFHKIKLVR ETKVPRDKDM TLGELLKYKS QEGVRVLLLV
301: WDDKTSHDKF GIKTPGVMGT HDEETRKFFK HSSVICVLSP RYASSKLGLF KQQASPSSSI YIMTVVGTLF THHQKCVLVD TQAVGNNRKV TAFIGGLDLC
401: DGRYDTPEHR ILHDLDTVFK DDFHNPTFPA GTKAPRQPWH DLHCRIDGPA AYDVLINFEQ RWRKATRWKE FSLRLKGKTH WQDDALIRIG RISWILSPVF
501: KFLKDGTSII PEDDPCVWVS KEDDPENWHV QIFRSIDSGS VKGFPKYEDE AEAQHLECAK RLVVDKSIQT AYIQTIRSAQ HFIYIENQYF LGSSYAWPSY
601: RDAGADNLIP MELALKIVSK IRAKERFAVY VVIPLWPEGD PKSGPVQEIL YWQSQTMQMM YDVIAKELKA VQSDAHPLDY LNFYCLGKRE QLPDDMPATN
701: GSVVSDSYNF QRFMIYVHAK GMIVDDEYVL MGSANINQRS MAGTKDTEIA MGAYQPNHTW AHKGRHPRGQ VYGYRMSLWA EHLGKTGDEF VEPSDLECLK
801: KVNTISEENW KRFIDPKFSE LQGHLIKYPL QVDVDGKVSP LPDYETFPDV GGKIIGAHSM ALPDTLTT

Arabidopsis Description

PLDDELTAPhospholipase D delta [Source:UniProtKB/Swiss-Prot;Acc:Q9C5Y0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.