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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 1
  • golgi 1
  • mitochondrion 3
  • cytosol 2
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, peroxisome, secretory
BaCelLo:secretory
iPSORT:mitochondrion
MultiLoc:cytosol
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:peroxisome
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY15144 Canola peroxisome 99.08 90.7
Bra033225.1-P Field mustard cytosol 99.49 90.56
AT2G42010.2 Thale cress peroxisome 93.33 82.04
PGSC0003DMT400000378 Potato cytosol 21.66 80.53
PGSC0003DMT400026602 Potato cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, vacuole 25.15 80.07
CDY54926 Canola cytosol, nucleus, peroxisome 78.34 76.07
CDY52961 Canola cytosol, nucleus, peroxisome 77.21 75.81
KRG89825 Soybean cytoskeleton, cytosol, peroxisome 21.87 73.2
Solyc01g091910.2.1 Tomato plastid 66.43 72.29
TraesCS1B01G195200.1 Wheat cytosol 59.86 71.98
TraesCS1D01G189300.1 Wheat cytosol 59.75 71.85
GSMUA_Achr8P12030_001 Banana plastid 58.62 71.02
CDY41006 Canola mitochondrion 11.29 70.51
KRH65182 Soybean cytosol 54.31 69.7
CDY13283 Canola mitochondrion 25.26 69.69
CDX86742 Canola cytosol 60.16 69.19
TraesCS1B01G382600.1 Wheat mitochondrion 58.73 69.08
CDY28756 Canola cytosol, extracellular 8.93 69.05
TraesCS1A01G365100.2 Wheat mitochondrion 58.52 68.84
TraesCS1D01G370600.1 Wheat cytosol 58.52 68.84
HORVU1Hr1G079150.1 Barley cytosol 57.6 67.75
Os03t0119100-01 Rice plasma membrane 57.8 67.43
KXG40331 Sorghum cytosol 56.67 66.83
KRH48290 Soybean nucleus 71.77 66.76
CDX90807 Canola cytosol 55.03 66.42
CDY13284 Canola cytosol 31.11 66.01
Zm00001d027386_P002 Maize cytosol 56.37 65.83
CDY64184 Canola mitochondrion 54.93 65.64
HORVU4Hr1G085550.2 Barley cytosol 55.85 65.46
VIT_15s0048g01160.t01 Wine grape cytosol 73.0 65.41
KRH01625 Soybean cytosol 73.51 65.27
TraesCS4D01G346700.1 Wheat cytosol 55.54 65.1
CDY51545 Canola cytosol 9.55 65.03
KRH70487 Soybean cytosol 73.72 64.92
CDX90808 Canola cytosol 52.57 64.48
TraesCS5A01G520900.1 Wheat cytosol 54.93 64.38
GSMUA_Achr4P24890_001 Banana cytosol, plastid 57.29 63.05
GSMUA_Achr5P20150_001 Banana cytosol 64.48 62.99
Zm00001d050470_P001 Maize mitochondrion 25.67 62.81
TraesCS4B01G352300.1 Wheat cytosol 54.93 62.43
Solyc10g017650.1.1 Tomato cytosol 68.28 59.43
EER92041 Sorghum cytosol, nucleus, peroxisome 64.07 59.26
Zm00001d029684_P001 Maize peroxisome 63.76 59.26
Os10t0524400-01 Rice plasma membrane 63.14 58.8
Zm00001d015818_P002 Maize cytosol, nucleus, peroxisome 16.43 57.76
TraesCS1A01G187400.1 Wheat peroxisome 64.27 56.55
HORVU1Hr1G048970.1 Barley cytosol, nucleus, peroxisome 64.37 56.54
Zm00001d015256_P001 Maize cytosol 23.0 54.11
CDY46254 Canola cytosol 5.24 52.58
CDX80734 Canola cytosol 6.47 52.07
CDY67335 Canola cytosol 46.0 51.73
CDY41630 Canola cytosol 45.79 51.44
CDX72557 Canola cytosol 44.87 50.52
CDY35793 Canola cytosol 44.87 50.52
CDY47037 Canola cytosol 45.28 49.83
CDY20149 Canola cytosol, nucleus, peroxisome 10.27 46.95
CDY60551 Canola cytosol 38.91 46.67
CDY47540 Canola cytosol 38.81 46.55
CDY30108 Canola cytosol 38.71 46.54
CDX97705 Canola cytosol 38.71 46.54
CDY70643 Canola cytosol, peroxisome 10.16 46.48
CDX88175 Canola cytosol 34.8 45.75
CDY21865 Canola cytosol 37.88 45.44
CDX80505 Canola cytosol 36.24 45.26
CDY05351 Canola cytosol 37.17 44.42
CDY05490 Canola cytosol 36.96 44.17
CDY24051 Canola cytosol 31.52 40.5
CDY20148 Canola cytosol, peroxisome, plastid 16.53 40.35
CDX87920 Canola cytosol 14.17 40.23
CDY63527 Canola cytosol 13.76 40.12
CDY33065 Canola cytosol 31.01 39.84
CDY42882 Canola nucleus 11.6 35.09
CDY18811 Canola cytosol, nucleus, peroxisome 19.2 17.86
CDX92096 Canola nucleus 19.51 17.56
CDX95904 Canola cytosol, nucleus, peroxisome 19.51 17.46
CDY51604 Canola cytosol 1.75 6.03
Protein Annotations
KEGG:00564+3.1.4.4KEGG:00565+3.1.4.4Gene3D:2.60.40.150Gene3D:3.30.870.10MapMan:5.7.2.4.2GO:A0A078DLD8
InterPro:C2_domInterPro:C2_domain_sfEnsemblPlants:CDX90066ProteinID:CDX90066ProteinID:CDX90066.1ncoils:Coil
GO:GO:0003674GO:GO:0003824GO:GO:0004630GO:GO:0005488GO:GO:0005509GO:GO:0005575
GO:GO:0006629GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016020GO:GO:0016787
GO:GO:0046470GO:GO:0070290EnsemblPlantsGene:GSBRNA2T00150575001InterPro:IPR000008InterPro:IPR001736InterPro:IPR035892
PFAM:PF00168PFAM:PF00614PFAM:PF12357PIRSF:PIRSF036470InterPro:PLipase_D/transphosphatidylaseInterPro:PLipase_D_C
InterPro:PLipase_D_famInterPro:PLipase_D_plnPFscan:PS50004PFscan:PS50035PANTHER:PTHR18896PANTHER:PTHR18896:SF65
MetaCyc:PWY-3561MetaCyc:PWY-7039SMART:SM00155SMART:SM00239SUPFAM:SSF49562SUPFAM:SSF56024
UniParc:UPI0004EF0B41SEG:seg::::
Description
BnaA10g00160D
Coordinates
chrLK031861:+:1505678..1510726
Molecular Weight (calculated)
109556.0 Da
IEP (calculated)
7.741
GRAVY (calculated)
-0.534
Length
974 amino acids
Sequence
(BLAST)
001: MENYGSRYPY PYPQYPYQPS YQYPPAPYRP PGPGSEQYQP PPPPYYPYPP PYATPPPYAS PPPLHQHASG SHSGPLDYPP QPSSSPEYHR HSFDYRPSPY
101: PSPYPPHPQG TYAPPPPHYP YQEPAAQYAP PETKPQDPTP PPPSKTQAFP EYRRQDCLTS VPNDNVLLLH GNFDIWIYHA KNLPNMDMFH KTLGDVFGGQ
201: LNRKITSDPY VSVSVAGAVI GRTYVMSNSE NPVWMQHFYV PVAHHAAEVH FVVKDSDVVG SQLIGLVTIP VEQIYSGAKI EGTFPILSSN GKPCKPGANL
301: SLSIQYTPME KLSVYHHGVG AGPDYQGVPG TYFPLRKGGT VTLYQDAHVP EGMLPGIRLD NGMSYQHGKC WHDMFDAIRQ ARRLIYITGW SVWHKVRLVR
401: DKVGPASACT LGELLRSKSQ EGVRVLLLVW DDPTSRSILG YKTDGVMATH DEETRRFFKH SSVQVLLCPR NAGKRHSWVK QREVGTIYTH HQKNVIVDAD
501: AGANRRKIVA FVGGLDLCDG RYDTPQHPLF RTLQTIHKDD FHNPTFTGNL SGCPREPWHD LHSKIDGPAA YDVLTNFEER WLKAAKPSGI KKFKTSYDDA
601: LLRIDRIPDI VGVSDTPTIS ENDPEAWHVQ IFRSIDSNSV KGFPKDPKDA TCKNLVCGKN VLIDMSIHTA YVKAIRAAQH FIYIENQYFI GSSYNWNAHK
701: DIGANNLIPM EIALKIAEKI RANERFAAYI VIPMWPEGVP TGAATQRILY WQHKTMQMMY ETIYKALVET GLEGAFSPQD YLNFFCLGNR EMVDGIDNSG
801: TGSPSNANTP QALSRKSRRF MIYVHSKGMV VDDEYVVIGS ANINQRSMEG TRDTEIAMGA YQPQHTWARK HSGPRGQIYG YRMSLWAEHM ATLDDCFTQP
901: ESIECVRKVR TMGERNWEQF AAEEVSDMRG HLLKYPVEVD RKGKVRPLPG SEAFPDVGGN IVGSFIAIQE NLTI
Best Arabidopsis Sequence Match ( AT2G42010.1 )
(BLAST)
0001: MDNHGPRYPY PYGQYPYPYP YPAPYRPPSS EPYPPPPTNQ YSAPYYPYPP PPYATPPPYA SPPPPHQHTS GSHSGPLDYS HNPQPSSLAA APPEYHRHSF
0101: DYQPSPYPYQ PQGNFGAYGP PPPHYSYQEP AQYPPPETKP QEPLPPPQQT QGFQEYRRQD CLSTGGTGHD NVSNSGSSYP PVDELLGGLH ISTNQPGPSV
0201: PQLSSLPSNS WQSRPGDLYG YPNSSFPSNS HLPQLGRVDS SSSYYASTES PHSADMQMTL FGKGSLKVLL LHGNLDIWIY HAKNLPNMDM FHKTLGDMFG
0301: RLPGKIEGQL TSKITSDPYV SVSVAGAVIG RTYVMSNSEN PVWMQHFYVP VAHHAAEVHF VVKDSDVVGS QLIGLVTIPV EQIYSGAKIE GTYPILNSNG
0401: KPCKPGANLS LSIQYTPMDK LSVYHHGVGA GPDYQGVPGT YFPLRKGGTV RLYQDAHVPE GMLPGIRLDN GMSYEHGKCW HDMFDAIRQA RRLIYITGWS
0501: VWHKVKLIRD KLGPASECTL GELLRSKSQE GVRVLLLIWD DPTSRSILGY KTDGVMATHD EETRRFFKHS SVQVLLCPRN AGKRHSWVKQ REVGTIYTHH
0601: QKNVIVDADA GGNRRKIIAF VGGLDLCDGR YDTPQHPLFR TLQTIHKDDF HNPTFTGNLS GCPREPWHDL HSKIDGPAAY DVLTNFEERW LKAAKPSGIK
0701: KFKTSYDDAL LRIDRIPDIL GVSDTPTVSE NDPEAWHVQI FRSIDSNSVK GFPKDPKDAT CKNLVCGKNV LIDMSIHTAY VKAIRAAQHF IYIENQYFIG
0801: SSYNWNAHKD IGANNLIPME IALKIAEKIR ANERFAAYIV IPMWPEGVPT GAATQRILYW QHKTIQMMYE TIYKALVETG LEGAFSPQDY LNFFCLGNRE
0901: MVDGIDNSGT GSPSNANTPQ ALSRKSRRFM VYVHSKGMVV DDEYVVIGSA NINQRSMEGT RDTEIAMGAY QPQHTWARKH SGPRGQIYGY RMSLWAEHMA
1001: TLDDCFTQPE SIECVRKVRT MGERNWKQFA AEEVSDMRGH LLKYPVEVDR KGKVRPLPGS ETFPDVGGNI VGSFIAIQEN LTI
Arabidopsis Description
PLDBETA1phospholipase D beta 1 [Source:TAIR;Acc:AT2G42010]
SUBAcon: [peroxisome]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.