Factsheet for AT2G42010.2

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 2
plasma membrane 1
golgi 1
plastid 1
peroxisome 2
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome
Any Predictor:	cytosol, mitochondrion, peroxisome, plastid, secretory
BaCelLo:	secretory
EpiLoc:	vacuole
iPSORT:	plastid
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	peroxisome
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX90066	Canola	cytosol	82.04	93.33
CDY15144	Canola	peroxisome	88.63	92.29
Bra033225.1-P	Field mustard	cytosol	88.63	91.78
AT4G00240.1	Thale cress	cytosol	69.49	83.06
PGSC0003DMT400000378	Potato	cytosol	18.95	80.15
PGSC0003DMT400026602	Potato	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, vacuole	22.11	80.07
Solyc01g091910.2.1	Tomato	plastid	60.56	74.97
KRG89825	Soybean	cytoskeleton, cytosol, peroxisome	19.22	73.2
TraesCS1B01G195200.1	Wheat	cytosol	53.07	72.59
TraesCS1D01G189300.1	Wheat	cytosol	53.07	72.59
GSMUA_Achr8P12030_001	Banana	plastid	51.9	71.52
KRH65182	Soybean	cytosol	48.92	71.41
TraesCS1B01G382600.1	Wheat	mitochondrion	51.9	69.44
AT4G11850.1	Thale cress	cytosol	53.7	69.35
KRH48290	Soybean	nucleus	65.43	69.25
TraesCS1A01G365100.2	Wheat	mitochondrion	51.71	69.2
TraesCS1D01G370600.1	Wheat	cytosol	51.71	69.2
VIT_15s0048g01160.t01	Wine grape	cytosol	67.87	69.18
KRH01625	Soybean	cytosol	67.51	68.19
HORVU1Hr1G079150.1	Barley	cytosol	50.81	68.0
AT4G11840.1	Thale cress	cytosol	53.07	67.9
KRH70487	Soybean	cytosol	67.69	67.81
Os03t0119100-01	Rice	plasma membrane	50.9	67.54
AT4G11830.2	Thale cress	cytosol	51.71	66.94
KXG40331	Sorghum	cytosol	49.82	66.83
Zm00001d027386_P002	Maize	cytosol	49.55	65.83
HORVU4Hr1G085550.2	Barley	cytosol	49.01	65.34
GSMUA_Achr4P24890_001	Banana	cytosol, plastid	52.17	65.31
TraesCS4D01G346700.1	Wheat	cytosol	48.65	64.86
GSMUA_Achr5P20150_001	Banana	cytosol	58.12	64.59
TraesCS5A01G520900.1	Wheat	cytosol	48.1	64.14
TraesCS4B01G352300.1	Wheat	cytosol	48.1	62.19
Solyc10g017650.1.1	Tomato	cytosol	62.55	61.93
Zm00001d050470_P001	Maize	mitochondrion	22.2	61.81
Os10t0524400-01	Rice	plasma membrane	57.22	60.61
EER92041	Sorghum	cytosol, nucleus, peroxisome	57.13	60.11
Zm00001d029684_P001	Maize	peroxisome	56.68	59.92
TraesCS1A01G187400.1	Wheat	peroxisome	58.21	58.27
Zm00001d015818_P002	Maize	cytosol, nucleus, peroxisome	14.53	58.12
HORVU1Hr1G048970.1	Barley	cytosol, nucleus, peroxisome	58.12	58.07
Zm00001d015256_P001	Maize	cytosol	20.31	54.35
AT4G35790.1	Thale cress	cytosol	41.06	52.42
AT1G52570.1	Thale cress	cytosol	33.94	46.42
AT3G15730.1	Thale cress	cytosol	33.57	45.93
AT5G25370.2	Thale cress	cytosol	32.67	44.15
AT1G55180.1	Thale cress	cytosol	26.9	39.11
AT3G05630.1	Thale cress	cytosol	17.06	18.07
AT3G16785.4	Thale cress	plastid	17.24	16.77

Protein Annotations

KEGG:00564+3.1.4.4	KEGG:00565+3.1.4.4	Gene3D:2.60.40.150	Gene3D:3.30.870.10	MapMan:50.3.1	EntrezGene:818802
UniProt:A0A1P8B0W4	ProteinID:ANM62547.1	ArrayExpress:AT2G42010	EnsemblPlantsGene:AT2G42010	RefSeq:AT2G42010	TAIR:AT2G42010
RefSeq:AT2G42010-TAIR-G	EnsemblPlants:AT2G42010.2	Unigene:At.14711	InterPro:C2_dom	InterPro:C2_domain_sf	GO:GO:0003674
GO:GO:0003824	InterPro:IPR000008	InterPro:IPR001736	InterPro:IPR035892	RefSeq:NP_001324696.1	PFAM:PF00168
PFAM:PF00614	PFAM:PF12357	Symbol:PLDBETA1	InterPro:PLipase_D/transphosphatidylase	InterPro:PLipase_D_C	InterPro:PLipase_D_fam
PFscan:PS50004	PFscan:PS50035	PANTHER:PTHR18896	PANTHER:PTHR18896:SF65	SMART:SM00155	SMART:SM00239
SUPFAM:SSF49562	SUPFAM:SSF56024	UniParc:UPI000848B7AA	SEG:seg	:	:

Description

PLDBETA1phospholipase D beta 1 [Source:TAIR;Acc:AT2G42010]

Coordinates

chr2:-:17532813..17538620

Molecular Weight (calculated)

124077.0 Da

IEP (calculated)

7.949

GRAVY (calculated)

-0.531

Length

1108 amino acids

Sequence
(BLAST)

0001: MDNHGPRYPY PYGQYPYPYP YPAPYRPPSS EPYPPPPTNQ YSAPYYPYPP PPYATPPPYA SPPPPHQHTS GSHSGPLDYS HNPQPSSLAA APPEYHRHSF
0101: DYQPSPYPYQ PQGNFGAYGP PPPHYSYQEP AQYPPPETKP QEPLPPPQQT QGFQEYRRQD CLSTGGTGHD NVSNSGSSYP PVDELLGGLH ISTNQPGPSV
0201: PQLSSLPSNS WQSRPGDLYG YPNSSFPSNS HLPQLGRVDS SSSYYASTES PHSADMQMTL FGKGSLKVLL LHGNLDIWIY HAKNLPNMDM FHKTLGDMFG
0301: RLPGKIEGQL TSKITSDPYV SVSVAGAVIG RTYVMSNSEN PVWMQHFYVP VAHHAAEVHF VVKDSDVVGS QLIGLVTIPV EQIYSGAKIE GTYPILNSNG
0401: KPCKPGANLS LSIQYTPMDK LSVYHHGVGA GPDYQGVPGT YFPLRKGGTV RLYQDAHVPE GMLPGIRLDN GMSYEHGKCW HDMFDAIRQA RRLIYITGWS
0501: VWHKVKLIRD KLGPASECTL GELLRSKSQE GVRVLLLIWD DPTSRSILGY KTDGVMATHD EETRRFFKHS SVQVLLCPRN AGKRHSWVKQ REVGTIYTHH
0601: QKNVIVDADA GGNRRKIIAF VGGLDLCDGR YDTPQHPLFR TLQTIHKDDF HNPTFTGNLS GCPREPWHDL HSKIDGPAAY DVLTNFEERW LKAAKPSGIK
0701: KFKTSYDDAL LRIDRIPDIL GVSDTPTVSE NDPEAWHVQI FRSIDSNSVK GFPKDPKDAT CKNLVCGKNV LIDMSIHTAY VKAIRAAQHF IYIENQYFIG
0801: SSYNWNAHKD IGANNLIPME IALKIAEKIR ANERFAAYIV IPMWPEGVPT GAATQRILYW QHKTIQMMYE TIYKALVETG LEGAFSPQDY LNFFCLGNRE
0901: MVDGIDNSGT GSPSNANTPQ VTKRRECLLL KFLMFLKRGV PVVLQALSRK SRRFMVYVHS KGMVVDDEYV VIGSANINQR SMEGTRDTEI AMGAYQPQHT
1001: WARKHSGPRG QIYGYRMSLW AEHMATLDDC FTQPESIECV RKVRTMGERN WKQFAAEEVS DMRGHLLKYP VEVDRKGKVR PLPGSETFPD VGGNIVGSFI
1101: AIQENLTI

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.