Factsheet for PGSC0003DMT400000378

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
vacuole 2
peroxisome 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400026602	Potato	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, vacuole	83.59	71.57
PGSC0003DMT400009253	Potato	cytosol	56.49	56.7
Zm00001d015818_P002	Maize	cytosol, nucleus, peroxisome	51.15	48.38
KRG89825	Soybean	cytoskeleton, cytosol, peroxisome	53.44	48.11
PGSC0003DMT400024828	Potato	cytosol	20.23	41.73
Solyc01g091910.2.1	Tomato	plastid	99.24	29.05
TraesCS1D01G189300.1	Wheat	cytosol	75.57	24.44
GSMUA_Achr8P12030_001	Banana	plastid	74.81	24.38
TraesCS1B01G195200.1	Wheat	cytosol	75.19	24.32
PGSC0003DMT400058531	Potato	plastid	76.72	23.67
Os03t0119100-01	Rice	plasma membrane	74.05	23.23
PGSC0003DMT400006661	Potato	cytosol	50.76	23.13
HORVU4Hr1G085550.2	Barley	cytosol	72.52	22.86
TraesCS4D01G346700.1	Wheat	cytosol	71.37	22.5
TraesCS5A01G520900.1	Wheat	cytosol	71.37	22.5
KXG40331	Sorghum	cytosol	70.61	22.4
TraesCS1B01G382600.1	Wheat	mitochondrion	70.61	22.34
TraesCS1D01G370600.1	Wheat	cytosol	70.61	22.34
Zm00001d027386_P002	Maize	cytosol	70.99	22.3
TraesCS1A01G365100.2	Wheat	mitochondrion	70.23	22.22
HORVU1Hr1G079150.1	Barley	cytosol	69.47	21.98
AT4G00240.1	Thale cress	cytosol	77.48	21.9
TraesCS4B01G352300.1	Wheat	cytosol	70.99	21.7
GSMUA_Achr4P24890_001	Banana	cytosol, plastid	73.28	21.69
CDX90066	Canola	cytosol	80.53	21.66
Zm00001d015256_P001	Maize	cytosol	33.21	21.01
KRH48290	Soybean	nucleus	80.92	20.25
CDY52961	Canola	cytosol, nucleus, peroxisome	75.95	20.06
VIT_15s0048g01160.t01	Wine grape	cytosol	83.21	20.06
CDY54926	Canola	cytosol, nucleus, peroxisome	75.95	19.84
CDY15144	Canola	peroxisome	80.53	19.83
GSMUA_Achr5P20150_001	Banana	cytosol	75.19	19.76
Bra033225.1-P	Field mustard	cytosol	80.53	19.72
KRH65182	Soybean	cytosol	56.11	19.37
PGSC0003DMT400025590	Potato	cytosol	59.54	19.24
AT2G42010.2	Thale cress	peroxisome	80.15	18.95
EER92041	Sorghum	cytosol, nucleus, peroxisome	75.57	18.8
KRH01625	Soybean	cytosol	78.63	18.78
Zm00001d029684_P001	Maize	peroxisome	74.81	18.7
KRH70487	Soybean	cytosol	78.63	18.63
PGSC0003DMT400011523	Potato	cytosol	60.69	18.57
Os10t0524400-01	Rice	plasma membrane	72.9	18.26
TraesCS1A01G187400.1	Wheat	peroxisome	75.95	17.98
HORVU1Hr1G048970.1	Barley	cytosol, nucleus, peroxisome	75.95	17.94
PGSC0003DMT400020297	Potato	cytosol	51.15	16.36
PGSC0003DMT400073469	Potato	cytosol	49.62	16.07
PGSC0003DMT400024831	Potato	extracellular	49.24	15.99
PGSC0003DMT400001650	Potato	cytosol, plastid	48.09	15.54
Bra008515.1-P	Field mustard	mitochondrion, plastid	76.72	13.86
Zm00001d050470_P001	Maize	mitochondrion	4.96	3.27
PGSC0003DMT400009250	Potato	cytosol	0.38	0.18

Protein Annotations

EnsemblPlants:PGSC0003DMT400000378	EnsemblPlantsGene:PGSC0003DMG400000133	Gene3D:3.30.870.10	GO:GO:0003674	GO:GO:0003824	InterPro:IPR001736
InterPro:PLipase_D/transphosphatidylase	InterPro:PLipase_D_C	InterPro:PLipase_D_fam	KEGG:00564+3.1.4.4	KEGG:00565+3.1.4.4	PANTHER:PTHR18896
PANTHER:PTHR18896:SF65	PFAM:PF00614	PFAM:PF12357	PFscan:PS50035	PGSC:PGSC0003DMG400000133	SMART:SM00155
SUPFAM:SSF56024	UniParc:UPI0002961AA2	UniProt:M0ZGN3	MapMan:50.3.1	:	:

Description

Phospholipase PLDb2 [Source:PGSC_GENE;Acc:PGSC0003DMG400000133]

Coordinates

chr1:-:71321742..71324760

Molecular Weight (calculated)

29947.7 Da

IEP (calculated)

6.876

GRAVY (calculated)

-0.492

Length

262 amino acids

Sequence
(BLAST)

001: MEIALKIAEK IRAHERFAAY IVLPMWPEGN PTGAATQRIL YWQNKTMQMM YETIYKALEE VGLENSYSPE DYLNFYCLGN REAGKVEGNE SPSAANTPQA
101: FSRKSRRFMI YVHSKGMIVD DEYVILGSAN INQRSLEGTR DTEIAMGAYQ PHHTWARKQS TPYGQIHGYR MSLWAEHLGV VEDCFRQPES LECVRRVRSM
201: GEYNWKQFAS DEVTEMRGHL LKYPVEVDRK GKVKNLTGCA NFPDVGGNII GSFLAIQENL TI

Best Arabidopsis Sequence Match ( AT2G42010.1 )
(BLAST)

0001: MDNHGPRYPY PYGQYPYPYP YPAPYRPPSS EPYPPPPTNQ YSAPYYPYPP PPYATPPPYA SPPPPHQHTS GSHSGPLDYS HNPQPSSLAA APPEYHRHSF
0101: DYQPSPYPYQ PQGNFGAYGP PPPHYSYQEP AQYPPPETKP QEPLPPPQQT QGFQEYRRQD CLSTGGTGHD NVSNSGSSYP PVDELLGGLH ISTNQPGPSV
0201: PQLSSLPSNS WQSRPGDLYG YPNSSFPSNS HLPQLGRVDS SSSYYASTES PHSADMQMTL FGKGSLKVLL LHGNLDIWIY HAKNLPNMDM FHKTLGDMFG
0301: RLPGKIEGQL TSKITSDPYV SVSVAGAVIG RTYVMSNSEN PVWMQHFYVP VAHHAAEVHF VVKDSDVVGS QLIGLVTIPV EQIYSGAKIE GTYPILNSNG
0401: KPCKPGANLS LSIQYTPMDK LSVYHHGVGA GPDYQGVPGT YFPLRKGGTV RLYQDAHVPE GMLPGIRLDN GMSYEHGKCW HDMFDAIRQA RRLIYITGWS
0501: VWHKVKLIRD KLGPASECTL GELLRSKSQE GVRVLLLIWD DPTSRSILGY KTDGVMATHD EETRRFFKHS SVQVLLCPRN AGKRHSWVKQ REVGTIYTHH
0601: QKNVIVDADA GGNRRKIIAF VGGLDLCDGR YDTPQHPLFR TLQTIHKDDF HNPTFTGNLS GCPREPWHDL HSKIDGPAAY DVLTNFEERW LKAAKPSGIK
0701: KFKTSYDDAL LRIDRIPDIL GVSDTPTVSE NDPEAWHVQI FRSIDSNSVK GFPKDPKDAT CKNLVCGKNV LIDMSIHTAY VKAIRAAQHF IYIENQYFIG
0801: SSYNWNAHKD IGANNLIPME IALKIAEKIR ANERFAAYIV IPMWPEGVPT GAATQRILYW QHKTIQMMYE TIYKALVETG LEGAFSPQDY LNFFCLGNRE
0901: MVDGIDNSGT GSPSNANTPQ ALSRKSRRFM VYVHSKGMVV DDEYVVIGSA NINQRSMEGT RDTEIAMGAY QPQHTWARKH SGPRGQIYGY RMSLWAEHMA
1001: TLDDCFTQPE SIECVRKVRT MGERNWKQFA AEEVSDMRGH LLKYPVEVDR KGKVRPLPGS ETFPDVGGNI VGSFIAIQEN LTI

Arabidopsis Description

PLDBETA1phospholipase D beta 1 [Source:TAIR;Acc:AT2G42010]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.