CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 2
plasma membrane 1
golgi 1
plastid 2
cytosol 3
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, peroxisome, plastid, secretory
BaCelLo:	secretory
EpiLoc:	vacuole
iPSORT:	plastid
MultiLoc:	cytosol
Plant-mPloc:	cytosol, plastid
PProwler:	mitochondrion
WoLF PSORT:	peroxisome
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH70487	Soybean	cytosol	95.72	94.94
PGSC0003DMT400000378	Potato	cytosol	18.78	78.63
PGSC0003DMT400026602	Potato	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, vacuole	21.79	78.1
KRG89825	Soybean	cytoskeleton, cytosol, peroxisome	20.6	77.66
KRH65182	Soybean	cytosol	53.14	76.81
KRH48290	Soybean	nucleus	71.92	75.36
Solyc01g091910.2.1	Tomato	plastid	60.98	74.75
CDX90066	Canola	cytosol	65.27	73.51
AT4G00240.1	Thale cress	cytosol	61.62	72.92
TraesCS1B01G195200.1	Wheat	cytosol	52.78	71.48
TraesCS1D01G189300.1	Wheat	cytosol	52.6	71.23
VIT_15s0048g01160.t01	Wine grape	cytosol	70.37	71.02
CDY52961	Canola	cytosol, nucleus, peroxisome	63.81	70.56
CDY54926	Canola	cytosol, nucleus, peroxisome	64.45	70.49
GSMUA_Achr8P12030_001	Banana	plastid	51.6	70.4
KRH77467	Soybean	nucleus	54.6	70.22
CDY15144	Canola	peroxisome	67.55	69.64
Bra033225.1-P	Field mustard	cytosol	67.64	69.35
AT2G42010.2	Thale cress	peroxisome	68.19	67.51
TraesCS1A01G365100.2	Wheat	mitochondrion	50.14	66.43
TraesCS1B01G382600.1	Wheat	mitochondrion	50.05	66.3
TraesCS1D01G370600.1	Wheat	cytosol	49.95	66.18
KXG40331	Sorghum	cytosol	49.59	65.86
HORVU1Hr1G079150.1	Barley	cytosol	49.59	65.7
Os03t0119100-01	Rice	plasma membrane	49.86	65.51
Zm00001d027386_P002	Maize	cytosol	49.32	64.87
GSMUA_Achr4P24890_001	Banana	cytosol, plastid	52.05	64.52
GSMUA_Achr5P20150_001	Banana	cytosol	58.52	64.39
TraesCS4D01G346700.1	Wheat	cytosol	48.4	63.9
HORVU4Hr1G085550.2	Barley	cytosol	48.4	63.9
TraesCS5A01G520900.1	Wheat	cytosol	48.04	63.42
KRH77469	Soybean	nucleus	4.01	62.86
Solyc10g017650.1.1	Tomato	cytosol	63.17	61.93
Zm00001d050470_P001	Maize	mitochondrion	22.33	61.56
KRG93706	Soybean	nucleus	16.32	61.51
TraesCS4B01G352300.1	Wheat	cytosol	47.86	61.26
EER92041	Sorghum	cytosol, nucleus, peroxisome	58.25	60.68
Zm00001d029684_P001	Maize	peroxisome	57.7	60.4
Os10t0524400-01	Rice	plasma membrane	57.06	59.85
KRH77470	Soybean	cytosol	7.29	58.39
TraesCS1A01G187400.1	Wheat	peroxisome	58.34	57.81
HORVU1Hr1G048970.1	Barley	cytosol, nucleus, peroxisome	57.89	57.26
Zm00001d015818_P002	Maize	cytosol, nucleus, peroxisome	13.67	54.15
Zm00001d015256_P001	Maize	cytosol	20.42	54.11
KRH60977	Soybean	cytosol	41.2	53.36
KRH51648	Soybean	cytosol	41.02	53.13
KRH59149	Soybean	cytosol	41.02	52.51
KRH76589	Soybean	extracellular	40.84	51.85
KRH43039	Soybean	cytosol	40.47	51.81
KRH28860	Soybean	mitochondrion	40.47	51.27
Bra008515.1-P	Field mustard	mitochondrion, plastid	64.63	48.9
KRH37270	Soybean	cytosol	11.58	48.29
KRH09736	Soybean	cytosol, endoplasmic reticulum, nucleus	30.08	46.41
KRH47460	Soybean	cytosol	34.09	46.23
KRH44445	Soybean	cytosol	33.0	45.94
KRH23570	Soybean	endoplasmic reticulum	33.73	45.85
KRH52444	Soybean	cytosol, plastid	32.54	43.48
KRH52443	Soybean	cytosol	32.73	43.46
KRH76243	Soybean	cytosol	3.19	42.68
KRH61774	Soybean	cytosol	13.13	41.26
KRH10002	Soybean	cytosol	27.89	40.32
KRH44164	Soybean	cytosol	27.16	38.4
KRH47139	Soybean	cytosol	26.89	38.36
KRH09735	Soybean	cytosol	15.95	37.72
KRH23329	Soybean	cytosol	5.74	23.77
KRH16190	Soybean	cytosol	2.19	20.87
KRH12101	Soybean	plastid	18.6	18.17
KRH37058	Soybean	plastid	18.41	17.94
KRG92923	Soybean	cytosol, nucleus, peroxisome	18.05	17.68
KRH05308	Soybean	endoplasmic reticulum	2.92	16.24

Protein Annotations

KEGG:00564+3.1.4.4	KEGG:00565+3.1.4.4	EntrezGene:100801286	Gene3D:2.60.40.150	Gene3D:3.30.870.10	MapMan:5.7.2.4.2
EMBL:ACUP02011523	InterPro:C2_dom	InterPro:C2_domain_sf	EnsemblPlantsGene:GLYMA_18G288600	GO:GO:0003674	GO:GO:0003824
UniProt:I1N548	InterPro:IPR000008	InterPro:IPR001736	InterPro:IPR035892	ProteinID:KRH01624.1	EnsemblPlants:KRH01625
ProteinID:KRH01625	ProteinID:KRH01625.1	PFAM:PF00168	PFAM:PF00614	PFAM:PF12357	InterPro:PLipase_D/transphosphatidylase
InterPro:PLipase_D_C	InterPro:PLipase_D_fam	PFscan:PS50004	PFscan:PS50035	PANTHER:PTHR18896	PANTHER:PTHR18896:SF65
MetaCyc:PWY-3561	MetaCyc:PWY-7039	SMART:SM00155	SMART:SM00239	SUPFAM:SSF49562	SUPFAM:SSF56024
UniParc:UPI000233F556	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr18:-:56840393..56849007

Molecular Weight (calculated)

123228.0 Da

IEP (calculated)

7.133

GRAVY (calculated)

-0.532

Length

1097 amino acids

Sequence
(BLAST)

0001: MDNYGSSSPY RYPNQYMYPP NPHQPYPPPP GSAPDPYAQH VPYQPYPYLS SHSFNYSYPP PPRSSSHSGH FEYSYPPPHP PPSYANPPYP YPYHVPPPNH
0101: DPPKPSLSHH ASFQHEPSHY YYQQPNDAYS ASAPQVHPDV HLRTNSFSGP YWHENTSTAG DEVSQTSDNS KPSQGSAYPS LDDLMSNVRL SDDQPTAPAS
0201: PPAPAGQPFM HSISVPKLQQ KREEFYGYSN NSFSGWGSSY HSRVDSSRLS DFSGSFNESV HSQSLQIVPV QNKGSLRVLL LHGNLDIWVH EAKNLPNMDM
0301: FHKTLGDMFG KLPGSVGNKI EGTMNKKITS DPYVSISVSN AVIGRTYVIS NSENPVWLQH FYVPVAYHAA EVHFLVKDSD IVGSQLIGIV AIPVEKIYSG
0401: EVVEGTFPIL NNNGKPCKQG AVLTLSIQYI PMEKLSIYHQ GVGAGPEYIG VPGTYFPLRR GGTVTLYQDA HVPDGSLPNV LLDSGMYYVN GKCWQDIFDS
0501: ISQARRLIYI TGWSVWHKVR LVRDAAGYAS DYTLGDLLRS KSQEGVRVLL LIWDDPTSRS ILGYKTDGVM ATHDEETRRF FKHSSVQVLL CPRSGKRHSW
0601: IKQKEVGTIY THHQKTVIVD ADAGNNRRKI IAFVGGLDLC DGRYDTPHHP LFRTLNTIHK DDYHNPTFTG NAGGCPREPW HDLHSKIDGP AAYDVLTNFE
0701: ERWLKASKPH GIKKLKISDD DALLRLERIP DVIGINDAPS VGEDDPEVWH AQIFRSIDSN SVKRFPKDPK DATSKNLVCG KNVLIDMSIH TAYVKTIRAA
0801: QHYIYIENQY FIGSSYNWSQ HKDLGANNLI PMEIALKIAE KIKANERFAV YVVIPMWPEG VPTGAATQRI LFWQNKTMQM MYETIYKALV EAGLEAAFSP
0901: QDYLNFFCLG NREAGNLYDN VSMTGAPPPA NSPQAASRNS QRFMIYVHSK GMIVDDEYVI LGSANINQRS MEGTRDSEIA MGAYQPHHTW ARKQSYPHGQ
1001: IHGYRMSLWA EHTGTIEECF LKPESLECVR RVRAMGEMNW KQFSANEATE MKGHLMKYPV EVDRKGKVRP LQDCEEFPDV GGKIVGSFLA MKENLTI

Best Arabidopsis Sequence Match ( AT2G42010.1 )
(BLAST)

0001: MDNHGPRYPY PYGQYPYPYP YPAPYRPPSS EPYPPPPTNQ YSAPYYPYPP PPYATPPPYA SPPPPHQHTS GSHSGPLDYS HNPQPSSLAA APPEYHRHSF
0101: DYQPSPYPYQ PQGNFGAYGP PPPHYSYQEP AQYPPPETKP QEPLPPPQQT QGFQEYRRQD CLSTGGTGHD NVSNSGSSYP PVDELLGGLH ISTNQPGPSV
0201: PQLSSLPSNS WQSRPGDLYG YPNSSFPSNS HLPQLGRVDS SSSYYASTES PHSADMQMTL FGKGSLKVLL LHGNLDIWIY HAKNLPNMDM FHKTLGDMFG
0301: RLPGKIEGQL TSKITSDPYV SVSVAGAVIG RTYVMSNSEN PVWMQHFYVP VAHHAAEVHF VVKDSDVVGS QLIGLVTIPV EQIYSGAKIE GTYPILNSNG
0401: KPCKPGANLS LSIQYTPMDK LSVYHHGVGA GPDYQGVPGT YFPLRKGGTV RLYQDAHVPE GMLPGIRLDN GMSYEHGKCW HDMFDAIRQA RRLIYITGWS
0501: VWHKVKLIRD KLGPASECTL GELLRSKSQE GVRVLLLIWD DPTSRSILGY KTDGVMATHD EETRRFFKHS SVQVLLCPRN AGKRHSWVKQ REVGTIYTHH
0601: QKNVIVDADA GGNRRKIIAF VGGLDLCDGR YDTPQHPLFR TLQTIHKDDF HNPTFTGNLS GCPREPWHDL HSKIDGPAAY DVLTNFEERW LKAAKPSGIK
0701: KFKTSYDDAL LRIDRIPDIL GVSDTPTVSE NDPEAWHVQI FRSIDSNSVK GFPKDPKDAT CKNLVCGKNV LIDMSIHTAY VKAIRAAQHF IYIENQYFIG
0801: SSYNWNAHKD IGANNLIPME IALKIAEKIR ANERFAAYIV IPMWPEGVPT GAATQRILYW QHKTIQMMYE TIYKALVETG LEGAFSPQDY LNFFCLGNRE
0901: MVDGIDNSGT GSPSNANTPQ ALSRKSRRFM VYVHSKGMVV DDEYVVIGSA NINQRSMEGT RDTEIAMGAY QPQHTWARKH SGPRGQIYGY RMSLWAEHMA
1001: TLDDCFTQPE SIECVRKVRT MGERNWKQFA AEEVSDMRGH LLKYPVEVDR KGKVRPLPGS ETFPDVGGNI VGSFIAIQEN LTI

Arabidopsis Description

PLDBETA1phospholipase D beta 1 [Source:TAIR;Acc:AT2G42010]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.