Skip to main content
crop-pal logo
Soybean
Search for another protein from :
Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum

Predictor Summary:
  • nucleus 1
  • extracellular 1
  • plastid 1
  • cytosol 3
  • endoplasmic reticulum 1
  • vacuole 1
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum
Any Predictor:cytosol, endoplasmic reticulum, extracellular, mitochondrion, nucleus, plastid, vacuole
BaCelLo:nucleus
EpiLoc:extracellular
iPSORT:plastid
MultiLoc:cytosol
Plant-mPloc:endoplasmic reticulum, vacuole
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
 nucleus: 21132161
endoplasmic reticulum: 27224218
mitochondrion: 27780359
endoplasmic reticulum: 28499913
msms PMID: 21132161 doi
B Cooper, KB Campbell, J Feng, WM Garrett, R Frederick
Soybean Genomics and Improvement Laboratory, USDA-ARS, Beltsville, MD 20705, USA. bret.cooper@ars.usda.gov
msms PMID: 27780359 doi
G Mustafa, S Komatsu
Graduate School of Life and Environmental Science, University of Tsukuba , Tsukuba 305-8572, Japan., National Institute of Crop Science, National Agriculture and Food Research Organization , Tsukuba 305-8518, Japan.
msms PMID: 28499913 doi
S Komatsu, X Wang, X Yin, Y Nanjo, H Ohyanagi, K Sakata
Department of Life Science and Informatics, Maebashi Institute of Technology, Maebashi 371-0816, Japan. Electronic address: ksakata@maebashi-it.ac.jp., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan. Electronic address: komatsu.setsuko.fu@u.tsukuba.ac.jp., King Abdullah University of Science and Technology (KAUST), Computational Bioscience Research Center (CBRC), Thuwal 23955-6900, Saudi Arabia.
msms PMID: 27224218 doi
X Wang, S Komatsu
Graduate School of Life and Environmental Sciences, University of Tsukuba , Tsukuba 305-8572, Japan., National Institute of Crop Science, National Agriculture and Food Research Organization , Tsukuba 305-8518, Japan.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH44445 Soybean cytosol 86.0 88.07
KRH47460 Soybean cytosol 87.86 87.64
KRH09736 Soybean cytosol, endoplasmic reticulum, nucleus 73.36 83.26
PGSC0003DMT400073469 Potato cytosol 82.16 81.95
Solyc06g068090.2.1 Tomato plastid 82.03 81.83
KXG31749 Sorghum cytosol 81.91 81.4
Zm00001d039670_P004 Maize cytosol 81.41 80.91
Zm00001d008727_P002 Maize cytosol 81.41 80.91
KRH09735 Soybean cytosol 46.34 80.6
GSMUA_Achr7P10170_001 Banana cytosol 53.41 79.81
EES17463 Sorghum cytosol 80.05 79.46
TraesCS3B01G149100.1 Wheat unclear 79.8 79.31
HORVU3Hr1G024530.2 Barley plastid 79.68 79.19
TraesCS3A01G130000.1 Wheat plastid 79.55 79.06
Os01t0172400-03 Rice plastid 79.55 79.06
TraesCS3D01G130900.1 Wheat golgi 79.43 78.94
PGSC0003DMT400001650 Potato cytosol, plastid 76.33 75.96
Solyc03g116620.2.1 Tomato plastid 75.46 75.09
OQU77524 Sorghum plastid 73.61 72.35
Os05t0171000-01 Rice plasma membrane 72.37 70.87
TraesCS1D01G116700.1 Wheat cytosol 71.38 70.67
TraesCS1A01G115300.1 Wheat cytosol 71.38 70.67
TraesCS1B01G135200.1 Wheat cytosol 70.01 69.07
HORVU1Hr1G025370.1 Barley cytosol 71.87 67.84
GSMUA_Achr10P... Banana cytosol, plastid 37.67 66.52
Zm00001d037643_P001 Maize cytosol 72.99 65.01
KRH52443 Soybean cytosol 66.29 64.77
KRH52444 Soybean cytosol, plastid 64.06 62.97
KRH61774 Soybean cytosol 26.39 61.03
KRG89825 Soybean cytoskeleton, cytosol, peroxisome 17.47 48.45
KRH10002 Soybean cytosol 42.87 45.59
KRH59149 Soybean cytosol 46.59 43.87
KRH43039 Soybean cytosol 46.22 43.52
KRH60977 Soybean cytosol 45.6 43.45
KRH47139 Soybean cytosol 41.26 43.3
KRH44164 Soybean cytosol 41.39 43.04
KRH76589 Soybean extracellular 45.97 42.94
KRH28860 Soybean mitochondrion 45.97 42.84
KRH51648 Soybean cytosol 44.73 42.62
KRG93706 Soybean nucleus 15.37 42.61
KRH77467 Soybean nucleus 44.73 42.32
KRH65182 Soybean cytosol 34.7 36.89
KRH37270 Soybean cytosol 12.02 36.88
KRH77469 Soybean nucleus 3.1 35.71
KRH48290 Soybean nucleus 46.22 35.63
KRH01625 Soybean cytosol 45.85 33.73
KRH70487 Soybean cytosol 46.1 33.63
KRH77470 Soybean cytosol 5.7 33.58
KRH76243 Soybean cytosol 3.35 32.93
KRH23329 Soybean cytosol 10.29 31.32
KRH16190 Soybean cytosol 3.35 23.48
KRH05308 Soybean endoplasmic reticulum 5.08 20.81
KRH12101 Soybean plastid 24.91 17.9
KRH37058 Soybean plastid 24.66 17.67
KRG92923 Soybean cytosol, nucleus, peroxisome 23.92 17.23
Protein Annotations
KEGG:00564+3.1.4.4KEGG:00565+3.1.4.4EntrezGene:100784434Gene3D:2.60.40.150Gene3D:3.30.870.10MapMan:5.7.2.4.1
EMBL:ACUP02008474InterPro:C2_domInterPro:C2_domain_sfEnsemblPlantsGene:GLYMA_13G364900GO:GO:0003674GO:GO:0003824
GO:GO:0004630GO:GO:0005488GO:GO:0005509GO:GO:0005575GO:GO:0006629GO:GO:0008150
GO:GO:0008152GO:GO:0009056GO:GO:0009987GO:GO:0016020GO:GO:0016042GO:GO:0016787
GO:GO:0046470GO:GO:0070290UniProt:I1M5T2InterPro:IPR000008InterPro:IPR001736InterPro:IPR035892
ProteinID:KRH23569.1EnsemblPlants:KRH23570ProteinID:KRH23570ProteinID:KRH23570.1PFAM:PF00168PFAM:PF00614
PFAM:PF12357PIRSF:PIRSF036470InterPro:PLipase_D/transphosphatidylaseInterPro:PLipase_D_CInterPro:PLipase_D_famInterPro:PLipase_D_pln
PFscan:PS50035PANTHER:PTHR18896PANTHER:PTHR18896:SF114MetaCyc:PWY-3561MetaCyc:PWY-7039SMART:SM00155
SMART:SM00239SUPFAM:SSF49562SUPFAM:SSF56024UniParc:UPI000233B6B6::
Description
hypothetical protein
Coordinates
chr13:+:45119805..45125074
Molecular Weight (calculated)
92083.7 Da
IEP (calculated)
6.307
GRAVY (calculated)
-0.398
Length
807 amino acids
Sequence
(BLAST)
001: MAQILLHGTL HATIYEVDKL KIGGGNFLTK IVQNIEETVG IGKGVTKLYA TIDLEKARVG RTRIIEKEIK NPRWYESFHI YCAHMASNII FTVKDDNPIG
101: ATLIGRAYVP VQEILHGEEI DRWVEILDEH KNPIHGHSKI HVKLQYFDVS KDRNWALGIR SPKFPGVPYT FFSQRRGCKV SLYQDAHVPD NFVPKIQLSG
201: GQTYQAHRCW EDVFDAITKA QHLIYITGWS VYTEISLVRD SRRPKPGGDE TLGELLKKKA REGVRVLMLV WDDRTSVPLL KKDGLMATHD QETEEYFRGT
301: EVHCVLCPRN PDDGGSFVQD LEISTMFTHH QKIVVVDGEL PSGDSNKRRI VSFVGGIDLC DGRYDTQFHS LFRTLDTAHH DDFHQPNFGG SSIKKGGPRE
401: PWHDIHSRLE GPIAWDVLFN FEQRWRKQGG KDLLVPLRDL EDVIIPPSPV TYIDDHETWN VQLFRSIDGG AAFGFPETPE DAARVGLVSG KDNIIDRSIQ
501: DAYVNAIRRA KNFIYIENQY FLGSSYDWSA DGIKPEAIDA LHIIPKELSL KIVSKIEAGE RFSVYVVVPM WPEGVPESAS VQAILDWQRR TMDMMYKDVV
601: QALRAKGIVE NPRNYLTFFC LGNREVKKQG EYEPPERPDP DTDYIRAQEA RRFMIYVHAK MMIVDDEYII VGSANINQRS MDGARDSEIA MGAYQPFHLA
701: ARQPARGQIH GFRMSLWYEH LGLLHDSFLH PENEECIKKV NQIADKYWDI YSSESLEHDL PGHLLRYPIG VSNEGVVTEL PGFEFFPDTK ARVLGDKVDY
801: LPPILTT
Best Arabidopsis Sequence Match ( AT3G15730.1 )
(BLAST)
001: MAQHLLHGTL HATIYEVDAL HGGGVRQGFL GKILANVEET IGVGKGETQL YATIDLQKAR VGRTRKIKNE PKNPKWYESF HIYCAHLASD IIFTVKDDNP
101: IGATLIGRAY IPVDQVINGE EVDQWVEILD NDRNPIQGGS KIHVKLQYFH VEEDRNWNMG IKSAKFPGVP YTFFSQRQGC KVSLYQDAHI PDNFVPRIPL
201: AGGKNYEPQR CWEDIFDAIS NAKHLIYITG WSVYAEIALV RDSRRPKPGG DVTIGELLKK KASEGVRVLL LVWDDRTSVD VLKKDGLMAT HDEETENFFR
301: GSDVHCILCP RNPDDGGSIV QSLQISTMFT HHQKIVVVDS EMPSRGGSEM RRIVSFVGGI DLCDGRYDTP FHSLFRTLDT VHHDDFHQPN FTGAAITKGG
401: PREPWHDIHS RLEGPIAWDV MYNFEQRWSK QGGKDILVKL RDLSDIIITP SPVMFQEDHD VWNVQLFRSI DGGAAAGFPE SPEAAAEAGL VSGKDNIIDR
501: SIQDAYIHAI RRAKDFIYVE NQYFLGSSFA WAADGITPED INALHLIPKE LSLKIVSKIE KGEKFRVYVV VPMWPEGLPE SGSVQAILDW QRRTMEMMYK
601: DVIQALRAQG LEEDPRNYLT FFCLGNREVK KDGEYEPAEK PDPDTDYMRA QEARRFMIYV HTKMMIVDDE YIIIGSANIN QRSMDGARDS EIAMGGYQPH
701: HLSHRQPARG QIHGFRMSLW YEHLGMLDET FLDPSSLECI EKVNRISDKY WDFYSSESLE HDLPGHLLRY PIGVASEGDI TELPGFEFFP DTKARILGTK
801: SDYLPPILTT
Arabidopsis Description
PLDALPHA1Phospholipase D alpha 1 [Source:UniProtKB/Swiss-Prot;Acc:Q38882]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.