CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
extracellular 1
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH23329	Soybean	cytosol	29.64	84.91
KRH47139	Soybean	cytosol	80.24	79.19
KRH44164	Soybean	cytosol	80.9	79.12
VIT_09s0002g02390.t01	Wine grape	cytosol	73.12	73.8
PGSC0003DMT400006661	Potato	cytosol	53.36	70.43
CDY24051	Canola	cytosol	63.24	63.32
CDY33065	Canola	cytosol	63.11	63.19
AT1G55180.1	Thale cress	cytosol	63.11	62.86
Bra037982.1-P	Field mustard	cytosol	62.98	62.81
KRG89825	Soybean	cytoskeleton, cytosol, peroxisome	17.26	45.02
KRH09736	Soybean	cytosol, endoplasmic reticulum, nucleus	40.58	43.32
KRH23570	Soybean	endoplasmic reticulum	45.59	42.87
Zm00001d005770_P001	Maize	cytosol	42.56	42.67
Os09t0421300-01	Rice	cytosol	45.85	42.59
TraesCS5A01G223500.1	Wheat	cytosol	46.25	42.49
EER98913	Sorghum	cytosol	46.25	42.44
TraesCS5D01G231100.1	Wheat	cytosol	46.25	42.29
TraesCS5B01G222500.1	Wheat	cytosol	45.98	42.25
KRH44445	Soybean	cytosol	43.74	42.13
KRH47460	Soybean	cytosol	44.66	41.9
HORVU5Hr1G064520.1	Barley	cytosol	45.85	41.88
KRH52443	Soybean	cytosol	44.8	41.16
KRH52444	Soybean	cytosol, plastid	42.69	39.46
KRH61774	Soybean	cytosol	17.0	36.96
KRH60977	Soybean	cytosol	40.71	36.48
KRH09735	Soybean	cytosol	22.27	36.42
HORVU7Hr1G082870.1	Barley	cytosol	26.09	36.07
KRH51648	Soybean	cytosol	40.05	35.89
KRH77467	Soybean	nucleus	40.05	35.64
KRH76589	Soybean	extracellular	40.05	35.19
KRH43039	Soybean	cytosol	39.0	34.54
KRH28860	Soybean	mitochondrion	39.39	34.53
KRH59149	Soybean	cytosol	38.87	34.42
KRH77470	Soybean	cytosol	5.93	32.85
KRH37270	Soybean	cytosol	11.07	31.94
KRG93706	Soybean	nucleus	12.12	31.62
KRH77469	Soybean	nucleus	2.9	31.43
KRH48290	Soybean	nucleus	40.32	29.23
KRH65182	Soybean	cytosol	28.85	28.85
KRH01625	Soybean	cytosol	40.32	27.89
KRH70487	Soybean	cytosol	40.45	27.76
KRH76243	Soybean	cytosol	2.64	24.39
KRH16190	Soybean	cytosol	3.29	21.74
KRH37058	Soybean	plastid	25.16	16.96
KRH12101	Soybean	plastid	25.03	16.92
KRH05308	Soybean	endoplasmic reticulum	3.95	15.23
KRG92923	Soybean	cytosol, nucleus, peroxisome	22.13	15.0

Protein Annotations

KEGG:00564+3.1.4.4	KEGG:00565+3.1.4.4	EntrezGene:100807431	Gene3D:3.30.870.10	MapMan:5.7.2.4.4	EMBL:ACUP02009116
InterPro:C2_dom	EnsemblPlantsGene:GLYMA_15G023500	GO:GO:0003674	GO:GO:0003824	GO:GO:0004630	GO:GO:0005488
GO:GO:0005509	GO:GO:0005575	GO:GO:0006629	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056
GO:GO:0009987	GO:GO:0016020	GO:GO:0016042	GO:GO:0016787	GO:GO:0046470	GO:GO:0070290
UniProt:I1MCY6	InterPro:IPR000008	InterPro:IPR001736	EnsemblPlants:KRH10002	ProteinID:KRH10002	ProteinID:KRH10002.1
PFAM:PF00168	PFAM:PF00614	PFAM:PF12357	PIRSF:PIRSF036470	InterPro:PLipase_D/transphosphatidylase	InterPro:PLipase_D_C
InterPro:PLipase_D_fam	InterPro:PLipase_D_pln	PFscan:PS50035	PANTHER:PTHR18896	PANTHER:PTHR18896:SF79	MetaCyc:PWY-3561
MetaCyc:PWY-7039	SMART:SM00155	SUPFAM:SSF56024	UniParc:UPI000233B5E6	SEG:seg	:

Description

hypothetical protein

Coordinates

chr15:+:1855931..1859297

Molecular Weight (calculated)

87084.8 Da

IEP (calculated)

7.207

GRAVY (calculated)

-0.474

Length

759 amino acids

Sequence
(BLAST)

001: MEEKPKLLIH GTIEATIFNA TPYSPSFPFN CVCTNGKPAY VTINIDNNRV AKTTQEHERV WNQTFQIQCA HPEDSTTTIT LKTSCSVLGK FHVQAKRLKE
101: ESLINGFFPL LMENGKPNPQ LKLRFMLWFK PADMEPSWTK ILSNGEFQGL RDATFPQRSN CQVKLYHDAH HSSTFQPPFD LCGAPRKLWE DVYKAIEGAN
201: YLIYIAGWSF NPKMVLVRDP QTEIPHAREI KLGELLKKKA EEGVAVRVMI WDDETSLPFI KNKGVMKTHD EDAFAYFKHT KVICRKCPRL HHEFPTLFAH
301: HQKTITVDTR APNSVRAREI MSFLGGVDLC DGRYDTEKHS LFQTLTEESH YHDFYQTNIA GASLNKGGPR EPWHDAHASV TGDAAWDVLT NFEQRWTKQC
401: DASLLVPANT LENLIPTCSS PPKERNWKVQ VYRSIDHVSA SQLFRKLTVE RSIHEAYVEA IRRADRFVYI ENQYFIGGCH LWQKDRHSGC RNLIPVEIAL
501: KVVSKIKARE RFAVYIVIPM WPEGVPESEP VQDILHWTRE TMIMMYKLIG EAIIESGEPG HPRDYLNFFC LANREKKGKE EYLSPHSPHP ETQYWNAQKN
601: RRFPVYVHSK IMIVDDIYIL IGSANVNQRS MDGQRDTEIA IGAYQSQDGA DHHIISRGDI HAYRMSLWYE HTGITEELFL EPESLSCVKR MLSIGDHMWG
701: VYSSEETVDM EGVHLVSYPV KVTQEGSVKD TVDGGDHFPD TKSPVKGKRS KFLAPIFTT

Best Arabidopsis Sequence Match ( AT1G55180.1 )
(BLAST)

001: MELEEQKKYF HGTLEITIFD ATPFSPPFPF NCICTKPKAA YVTIKINKKK VAKTSSEYDR IWNQTFQILC AHPVTDTTIT ITLKTRCSVL GRFRISAEQI
101: LTSNSAVING FFPLIADNGS TKRNLKLKCL MWFRPAYLEP GWCRALEEAS FQGIRNASFP QRSNCRVVLY QDAHHKATFD PRVDDVPFNA RNLWEDVYKA
201: IESARHLVYI AGWALNPNLV LVRDNETEIP HAVGVTVGEL LKRKSEEGVA VRVMLWNDET SLPMIKNKGV MRTNVERALA YFRNTNVVCR LCPRLHKKLP
301: TAFAHHQKTI TLDTRVTNSS TKEREIMSFL GGFDLCDGRY DTEEHSLFRT LGTEADFYQT SVAGAKLSRG GPREPWHDCH VSVVGGAAWD VLKNFEQRWT
401: KQCNPSVLVN TSGIRNLVNL TGPTEENNRK WNVQVLRSID HISATEMPRG LPVEKSVHDG YVAAIRKAER FIYIENQYFM GSCDHWESKN DKICSGCTNL
501: IPVEIALKIA AKIRARERFA VYIVIPMWPE GPPESETVEE ILHWTRETMS MMYQIIGEAI WEVGDKSHPR DYLNFFCLAN REEKRDGEFE AVSSPHQKTH
601: YWNAQRNRRF MVYVHSKLMI VDDTYILIGS ANINQRSMDG CRDTEIAIGC YQTNTNNTNE IQAYRLSLWY EHTGGKITAD DLSSSEPESL ECVRGLRTIG
701: EQMWEIYSGD KVVDMLGIHL VAYPISVTGD GAVEEVGDGC FPDTKTLVKG KRSKMFPPVL TT

Arabidopsis Description

PLDALPHA4Phospholipase D alpha 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9C888]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.