Factsheet for Bra037982.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
vacuole 1
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY24051	Canola	cytosol	96.71	97.1
AT1G55180.1	Thale cress	cytosol	87.52	87.4
PGSC0003DMT400006661	Potato	cytosol	48.62	64.35
VIT_09s0002g02390.t01	Wine grape	cytosol	63.34	64.1
KRH10002	Soybean	cytosol	62.81	62.98
KRH44164	Soybean	cytosol	63.86	62.63
KRH47139	Soybean	cytosol	62.94	62.29
KRH23329	Soybean	cytosol	19.05	54.72
Bra022740.1-P	Field mustard	cytosol, extracellular	8.02	48.41
Os09t0421300-01	Rice	cytosol	44.81	41.74
TraesCS5B01G222500.1	Wheat	cytosol	44.94	41.4
TraesCS5A01G223500.1	Wheat	cytosol	44.94	41.4
HORVU5Hr1G064520.1	Barley	cytosol	45.2	41.4
Bra000752.1-P	Field mustard	cytosol, nucleus, peroxisome	28.52	41.25
Zm00001d005770_P001	Maize	cytosol	40.87	41.08
TraesCS5D01G231100.1	Wheat	cytosol	44.68	40.96
EER98913	Sorghum	cytosol	44.28	40.75
Bra040960.1-P	Field mustard	cytosol	42.31	39.66
Bra030375.1-P	Field mustard	cytosol	41.92	39.29
Bra027209.1-P	Field mustard	cytosol	41.79	39.26
Bra021132.1-P	Field mustard	cytosol	41.39	38.79
Bra020497.1-P	Field mustard	cytosol	41.39	38.32
Bra034939.1-P	Field mustard	cytosol	39.55	36.13
HORVU7Hr1G082870.1	Barley	cytosol	25.49	35.34
Bra014871.1-P	Field mustard	cytosol	39.29	35.3
Bra000753.1-P	Field mustard	cytosol	35.48	34.01
Bra017730.1-P	Field mustard	cytosol	36.93	33.49
Bra010512.1-P	Field mustard	cytosol	35.48	33.46
Bra009836.1-P	Field mustard	cytosol	40.87	33.37
Bra033225.1-P	Field mustard	cytosol	39.95	28.41
Bra008515.1-P	Field mustard	mitochondrion, plastid	39.68	20.83
Bra040531.1-P	Field mustard	cytosol, nucleus, peroxisome	23.26	16.91
Bra022178.1-P	Field mustard	cytosol, nucleus, peroxisome	23.78	16.88

Protein Annotations

KEGG:00564+3.1.4.4	KEGG:00565+3.1.4.4	Gene3D:2.60.40.150	Gene3D:3.30.870.10	MapMan:5.7.2.4.4	EnsemblPlantsGene:Bra037982
EnsemblPlants:Bra037982.1	EnsemblPlants:Bra037982.1-P	InterPro:C2_dom	InterPro:C2_domain_sf	GO:GO:0003674	GO:GO:0003824
GO:GO:0004630	GO:GO:0005488	GO:GO:0005509	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886
GO:GO:0006629	GO:GO:0006950	GO:GO:0006970	GO:GO:0006995	GO:GO:0007154	GO:GO:0007275
GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009395	GO:GO:0009605	GO:GO:0009628
GO:GO:0009791	GO:GO:0009825	GO:GO:0009987	GO:GO:0009991	GO:GO:0016020	GO:GO:0016036
GO:GO:0016042	GO:GO:0016049	GO:GO:0016787	GO:GO:0040007	GO:GO:0045848	GO:GO:0046470
GO:GO:0048364	GO:GO:0051301	GO:GO:0051365	GO:GO:0070290	InterPro:IPR000008	InterPro:IPR001736
InterPro:IPR035892	UniProt:M4FA68	PFAM:PF00168	PFAM:PF12357	PFAM:PF13091	PIRSF:PIRSF036470
InterPro:PLD-like_dom	InterPro:PLipase_D/transphosphatidylase	InterPro:PLipase_D_C	InterPro:PLipase_D_fam	InterPro:PLipase_D_pln	PFscan:PS50035
PANTHER:PTHR18896	PANTHER:PTHR18896:SF79	SMART:SM00155	SUPFAM:SSF49562	SUPFAM:SSF56024	UniParc:UPI000253E6FA

Description

AT1G55180 (E=0.0) PLDEPSILON, PLDALPHA4 | PLDEPSILON (PHOSPHOLIPASE D ALPHA 4); phospholipase D

Coordinates

chrA06:+:297756..300189

Molecular Weight (calculated)

86682.4 Da

IEP (calculated)

7.307

GRAVY (calculated)

-0.416

Length

761 amino acids

Sequence
(BLAST)

001: MELEEQKKYF HGTLEITIFD ATPFSPTFPF NCICTKPRPA YVTVKLNKKK VAKTSLEHDR VWNQTFQILC AHPVSDTNIT ITLKTHCSVL GRFRISAEQI
101: LTSNTAIVNG CFPLTTNNGS TKPNLKLKCM MWFRPAYLEP GWCKTLEGES FQGIRNASFP QRSNCRVVLY QDAHHKATFD PRVHDVPCNA RNLWEDVYKA
201: IDCARHLVYI AGWALNPNLV LVRDDETEIP HAVGVTIGEL LKRKAHEGVA VRVMLWNDES SIPMIKNKGV MRTNDQTALA YFRDTSVVCR LCPRSHKKLP
301: TAFAHHQKTI TADTRVTNTN TKEREIMSFL GGFDLCDGRY DTEEHSLFRT LGTSDDFYQT SLAGAKLSRG GPREPWHDCH VCVVGAAAWD VLKNFEQRWT
401: KQCNPSVLVN TSGIRNLVNR TGPETTEEDD RNWNVQVLRS IDHVSATEMP RGLQVERSVH DGYVAAIRKA ERFIYIENQY FMGGCEHWEG KNGSGCTNLI
501: PVEIALKIAA KIREKERFAV YIVIPMWPEG TPESETVEEM LHWTRETMSM MYKIIGEAIW EVGDGSHPRD YLNFFCLANR EEKRDGEYEA ASSPHPKTQY
601: WNAQRSRRFM VYVHSKIMIV DDAYVLIGSA NINQRSMDGC RDTEIAIGCY QRNTTKTNEI RAYRLSLWYE HTGGQITVDE LSFSEPESLE CVRGLRTMGE
701: QMWDIYSGEK VVDMNGVHLV AYPISVTRDG VVEEIGDGVF PDTKTLVRGK RSKMLPPVLT T

Best Arabidopsis Sequence Match ( AT1G55180.1 )
(BLAST)

001: MELEEQKKYF HGTLEITIFD ATPFSPPFPF NCICTKPKAA YVTIKINKKK VAKTSSEYDR IWNQTFQILC AHPVTDTTIT ITLKTRCSVL GRFRISAEQI
101: LTSNSAVING FFPLIADNGS TKRNLKLKCL MWFRPAYLEP GWCRALEEAS FQGIRNASFP QRSNCRVVLY QDAHHKATFD PRVDDVPFNA RNLWEDVYKA
201: IESARHLVYI AGWALNPNLV LVRDNETEIP HAVGVTVGEL LKRKSEEGVA VRVMLWNDET SLPMIKNKGV MRTNVERALA YFRNTNVVCR LCPRLHKKLP
301: TAFAHHQKTI TLDTRVTNSS TKEREIMSFL GGFDLCDGRY DTEEHSLFRT LGTEADFYQT SVAGAKLSRG GPREPWHDCH VSVVGGAAWD VLKNFEQRWT
401: KQCNPSVLVN TSGIRNLVNL TGPTEENNRK WNVQVLRSID HISATEMPRG LPVEKSVHDG YVAAIRKAER FIYIENQYFM GSCDHWESKN DKICSGCTNL
501: IPVEIALKIA AKIRARERFA VYIVIPMWPE GPPESETVEE ILHWTRETMS MMYQIIGEAI WEVGDKSHPR DYLNFFCLAN REEKRDGEFE AVSSPHQKTH
601: YWNAQRNRRF MVYVHSKLMI VDDTYILIGS ANINQRSMDG CRDTEIAIGC YQTNTNNTNE IQAYRLSLWY EHTGGKITAD DLSSSEPESL ECVRGLRTIG
701: EQMWEIYSGD KVVDMLGIHL VAYPISVTGD GAVEEVGDGC FPDTKTLVKG KRSKMFPPVL TT

Arabidopsis Description

PLDALPHA4Phospholipase D alpha 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9C888]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.