Factsheet for Bra000752.1-P

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, nucleus, cytosol

Predictor Summary:

nucleus 2
vacuole 1
peroxisome 1
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra022740.1-P	Field mustard	cytosol, extracellular	18.06	75.4
CDX90807	Canola	cytosol	99.43	64.81
KRH77470	Soybean	cytosol	15.4	59.12
KRH77469	Soybean	nucleus	7.79	58.57
Bra000753.1-P	Field mustard	cytosol	81.75	54.16
Bra014871.1-P	Field mustard	cytosol	82.32	51.12
Zm00001d015818_P002	Maize	cytosol, nucleus, peroxisome	26.81	50.9
KRG93706	Soybean	nucleus	27.57	49.83
GSMUA_Achr8P12030_001	Banana	plastid	67.49	44.15
TraesCS1D01G189300.1	Wheat	cytosol	67.49	43.83
TraesCS1B01G195200.1	Wheat	cytosol	67.11	43.58
Zm00001d015256_P001	Maize	cytosol	34.03	43.24
Solyc08g080130.2.1	Tomato	nucleus	67.68	42.08
TraesCS1A01G365100.2	Wheat	mitochondrion	66.16	42.03
VIT_02s0025g04620.t01	Wine grape	cytosol	67.87	42.0
KRH77467	Soybean	nucleus	68.06	41.97
PGSC0003DMT400058531	Potato	plastid	67.68	41.93
Os03t0119100-01	Rice	plasma membrane	66.35	41.8
TraesCS1B01G382600.1	Wheat	mitochondrion	65.78	41.79
TraesCS1D01G370600.1	Wheat	cytosol	65.78	41.79
HORVU1Hr1G079150.1	Barley	cytosol	65.59	41.67
KXG40331	Sorghum	cytosol	65.21	41.53
Zm00001d050470_P001	Maize	mitochondrion	31.37	41.46
Zm00001d027386_P002	Maize	cytosol	64.64	40.77
HORVU4Hr1G085550.2	Barley	cytosol	63.69	40.31
GSMUA_Achr4P24890_001	Banana	cytosol, plastid	67.49	40.11
TraesCS5A01G520900.1	Wheat	cytosol	62.74	39.71
TraesCS4D01G346700.1	Wheat	cytosol	62.74	39.71
TraesCS4B01G352300.1	Wheat	cytosol	62.17	38.16
GSMUA_Achr5P20150_001	Banana	cytosol	67.3	35.51
Bra010512.1-P	Field mustard	cytosol	52.47	34.2
Bra034939.1-P	Field mustard	cytosol	53.99	34.09
Zm00001d029684_P001	Maize	peroxisome	67.49	33.87
Os10t0524400-01	Rice	plasma membrane	67.3	33.84
EER92041	Sorghum	cytosol, nucleus, peroxisome	67.3	33.62
Bra033225.1-P	Field mustard	cytosol	68.25	33.55
Bra017730.1-P	Field mustard	cytosol	51.9	32.54
TraesCS1A01G187400.1	Wheat	peroxisome	67.68	32.16
HORVU1Hr1G048970.1	Barley	cytosol, nucleus, peroxisome	67.49	32.01
Bra027209.1-P	Field mustard	cytosol	47.15	30.62
Bra030375.1-P	Field mustard	cytosol	47.15	30.54
Bra040960.1-P	Field mustard	cytosol	46.77	30.3
Bra020497.1-P	Field mustard	cytosol	46.77	29.93
Bra021132.1-P	Field mustard	cytosol	44.87	29.06
Bra037982.1-P	Field mustard	cytosol	41.25	28.52
Bra009836.1-P	Field mustard	cytosol	47.34	26.72
Bra008515.1-P	Field mustard	mitochondrion, plastid	68.44	24.83
Bra022178.1-P	Field mustard	cytosol, nucleus, peroxisome	25.67	12.59
Bra040531.1-P	Field mustard	cytosol, nucleus, peroxisome	24.33	12.23

Protein Annotations

EnsemblPlants:Bra000752.1	EnsemblPlants:Bra000752.1-P	EnsemblPlantsGene:Bra000752	Gene3D:3.30.870.10	GO:GO:0003674	GO:GO:0003824
InterPro:IPR001736	InterPro:PLipase_D/transphosphatidylase	InterPro:PLipase_D_C	InterPro:PLipase_D_fam	KEGG:00564+3.1.4.4	KEGG:00565+3.1.4.4
PANTHER:PTHR18896	PANTHER:PTHR18896:SF65	PFAM:PF00614	PFAM:PF12357	PFscan:PS50035	SEG:seg
SMART:SM00155	SUPFAM:SSF56024	UniParc:UPI000253FC8B	UniProt:M4C974	MapMan:5.7.2.4.2	:

Description

AT4G11840 (E=2e-253) PLDGAMMA3 | PLDGAMMA3; phospholipase D

Coordinates

chrA03:-:12873505..12875905

Molecular Weight (calculated)

59774.1 Da

IEP (calculated)

7.730

GRAVY (calculated)

-0.489

Length

526 amino acids

Sequence
(BLAST)

001: MKTSDEEIRH FFKNSSVQVI ICPRSGGKGH HSFVKKTEVG TIYTHHQKTL IVDAEAAQGR RKIIAFVGGL DMCKGRFDTP NHPLFRTLKT LHKDDFHNPN
101: FATSVDDGPR QPWHDLHSKI DGPAAYDVLA NFGQRWLKAS EKRHRISIHR SSSEDALLKI DRISNIMGLS EASSVSDNDP ESWHVQVFRS LDSTSVKEFP
201: KNSKEASGEN LLCGKNILVD MSIHTAYVKA IRSAQHFIYI ENQYFLGSSF NWDSHNDVGA NNLIPMEIAL KIASKIRARE KFAAYIVIPM WPEGDPTSKG
301: MQSILYWQYN TMQMMYQTIY KALVEAELDG QYEPQDYLNF FCLGTREVAD GNVNNNAKEN PTQVQALKSG RFMIYVHSKG MVVDDEFVLI GSANINQRSL
401: EGTRDTEIAM GGYQPQHSWA KKGSRPCGQI FGYRMSLWAE HLGFLEKSFE EPENMECVRR VRHLSELNWR QYAAKEVTEM TSHLLKYPVQ VDRTGQVTSL
501: PGCETFPDLG GKIIGTFHRI KENLTI

Best Arabidopsis Sequence Match ( AT4G11830.1 )
(BLAST)

001: MSMGGGSNHE FGQWLDQQLV PLATSSGSLM VELLHGRRIR KVDGEKSSKF TSDPYVTVSI SGAVIGRTFV ISNSENPVWM QHFDVPVAHS AAEVHFVVKD
101: NDPIGSKIIG VVGIPTKQLC SGNRIEGLFP ILNSSGKPCR KGAMLSLSIQ YTPMERMRLY QKGVGSGVEC VGVPGTYFPL RKGGRVTLYQ DAHVDDGTLP
201: SVHLDGGIQY RHGKCWEDMA DAIRRARRLI YITGWSVFHP VRLVRRNNDP TEGTLGELLK VKSQEGVRVL VLVWDDPTSM SFPGFSTKGL MNTSDEETRR
301: FFKHSSVQVL LCPRYGGKGH SFIKKSEVET IYTHHQKTMI VDAEAAQNRR KIVAFVGGLD LCNGRFDTPK HSLFGTLKTL HKDDFHNPNF VTTEDVGPRE
401: PWHDLHSKID GPAAYDVLAN FEERWMASKP RGIGKGRTSF DDSLLRINRI PDIMGLSEAS SANDNDPESW HVQVFRSIDS TSVKGFPKDP EEATGRNLLC
501: GKNILIDMSI HAAYVKAIRS AQHFIYIENQ YFLGSSFNWD SNKDLGANNL IPMEIALKIA NKIRARENFA AYIVIPMWPE GAPTSKPIQR ILYWQHKTMQ
601: MMYQTIYKAL LEVGLDGQLE PQDFLNFFCL GNREVGTREV PDGTVNVYNC PRKPPQPNAA QVQALKSRRF MIYVHSKGMV VDDEFVLIGS ANINQRSLEG
701: TRDTEIAMGG YQPHHSWAKK GSRPRGQIFG YRMSLWAEHL GFLEQEFEEP ENMECVRRVR QLSELNWGQY AAEEVTEMSG HLLKYPVQVD KTGKVSSLPG
801: CETFPDLGGK IIGSFLTLQE NLTI

Arabidopsis Description

PLDGAMMA2Phospholipase D gamma 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9T051]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.