Factsheet for Bra020497.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
vacuole 2
cytosol 3
endoplasmic reticulum 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY70643	Canola	cytosol, peroxisome	25.91	100.0
AT5G25370.2	Thale cress	cytosol	85.64	85.85
Bra009836.1-P	Field mustard	cytosol	85.52	75.43
VIT_04s0008g05450.t01	Wine grape	cytosol	59.98	63.53
Bra021132.1-P	Field mustard	cytosol	61.44	62.19
Bra027209.1-P	Field mustard	cytosol	60.95	61.85
PGSC0003DMT400020297	Potato	cytosol	61.31	61.54
Bra030375.1-P	Field mustard	cytosol	60.71	61.45
Bra040960.1-P	Field mustard	cytosol	60.71	61.45
KRH52443	Soybean	cytosol	61.44	61.14
Solyc12g011170.1.1	Tomato	cytosol	61.19	59.32
KRH52444	Soybean	cytosol, plastid	58.52	58.59
KRH61774	Soybean	cytosol	24.21	57.02
Bra022740.1-P	Field mustard	cytosol, extracellular	7.54	49.21
Bra000752.1-P	Field mustard	cytosol, nucleus, peroxisome	29.93	46.77
Bra034939.1-P	Field mustard	cytosol	42.82	42.26
Bra017730.1-P	Field mustard	cytosol	42.58	41.72
Bra037982.1-P	Field mustard	cytosol	38.32	41.39
Bra014871.1-P	Field mustard	cytosol	42.34	41.09
Bra010512.1-P	Field mustard	cytosol	40.15	40.89
Bra000753.1-P	Field mustard	cytosol	38.08	39.42
Bra033225.1-P	Field mustard	cytosol	43.55	33.46
Bra008515.1-P	Field mustard	mitochondrion, plastid	44.28	25.1
Bra022178.1-P	Field mustard	cytosol, nucleus, peroxisome	25.67	19.68
Bra040531.1-P	Field mustard	cytosol, nucleus, peroxisome	24.45	19.2

Protein Annotations

KEGG:00564+3.1.4.4	KEGG:00565+3.1.4.4	Gene3D:2.60.40.150	Gene3D:3.30.870.10	MapMan:5.7.2.4.1	EnsemblPlantsGene:Bra020497
EnsemblPlants:Bra020497.1	EnsemblPlants:Bra020497.1-P	InterPro:C2_dom	InterPro:C2_domain_sf	GO:GO:0003674	GO:GO:0003824
GO:GO:0004630	GO:GO:0005488	GO:GO:0005509	GO:GO:0005575	GO:GO:0006629	GO:GO:0008150
GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0016020	GO:GO:0016042	GO:GO:0016787
GO:GO:0046470	GO:GO:0070290	InterPro:IPR000008	InterPro:IPR001736	InterPro:IPR035892	UniProt:M4DVF3
PFAM:PF00168	PFAM:PF00614	PFAM:PF12357	PIRSF:PIRSF036470	InterPro:PLipase_D/transphosphatidylase	InterPro:PLipase_D_C
InterPro:PLipase_D_fam	InterPro:PLipase_D_pln	PFscan:PS50035	PANTHER:PTHR18896	PANTHER:PTHR18896:SF89	SMART:SM00155
SMART:SM00239	SUPFAM:SSF49562	SUPFAM:SSF56024	UniParc:UPI0002547037	SEG:seg	:

Description

AT5G25370 (E=0.0) PLDALPHA3 | PLDALPHA3 (PHOSPHLIPASE D ALPHA 3); phospholipase D

Coordinates

chrA02:+:24958059..24966445

Molecular Weight (calculated)

93252.3 Da

IEP (calculated)

7.215

GRAVY (calculated)

-0.368

Length

822 amino acids

Sequence
(BLAST)

001: MAEQLLLHGT LEVKIYRIDR LHKRGKFSLC GTGTGNKEPA GKKIQSPIKN LTSSCADLLG GHLYATVDLD RARVARTTMR RHPKWFQSFH LYAAHSISKI
101: IFTVKEDEPI SANLIGRAYL PVTEVITGQP VDRWLDLLDE HKSPIQGGSK IHVRVTFTSV THDVNWNKGI VIPSFKGVPN AFFNQREGCK VTLYQDAHVL
201: EDYQDITLSG GQVIYSHHRC WEDIFDAIWD AKHLIYITGW SVYTDITLIR DPKRPRQGGN LKLGELLKKK AEENVTVLML VWDDRTSNEA FKRDGLMMTH
301: DQETYNYFKN TKVRCVLCPR NPDNGSSIVQ GFEVAAMFTH HQKTVVVDAE VEGTKTKRRI VSFLGGIDLC DGRYDTQEHP LFGTLNNFHS NDFHQPNFDG
401: ASIKKGGPRE PWHDIHCKLD GPAAWDVLYN FEQRWMKQGS GRRYLVSMER LSEITVPPLP FVKSDDVEGW TVQIFRSIDD GAVLGFPEDP REASSVGLIT
501: GKNNVIERSI QDAYINAIRR AKHFIYIENQ YFLGSSFGWS SRDVNINEIN ALHLIPKEIS LKIVSKIEAG ERFSVYVVIP LWPEGKSGSA SVQAILDWQR
601: RTMEMMYTDV VIALRKKGLD ANPRDYLTFF CLGNREVNKA GEYSPPEKPA ANSDYARAQE SRRFMIYVHS KMMIVDDEYI IIGSANINQR SMDGGRDSEI
701: AMGAYQPNHL LSTNQMKPTG QVFSFRISLW LEHLRVITNP FMFPESEECI RMINAKADEL WGLYSAQVYP RDHDLPGHLL SYPISIGTNG EVTDLAGAEL
801: FPDTNAKVLG EKSNYLPPIL TT

Best Arabidopsis Sequence Match ( AT5G25370.2 )
(BLAST)

001: MTEQLLLHGT LEVKIYRIDK LHQRSRFNLC GKGNKEPTGK KTQSQIKRLT DSCTSLFGGH LYATIDLDRS RVARTMMRRH PKWLQSFHVY TAHSISKIIF
101: TVKEDEPVSA SLIGRAYLPV TEVITGQPID RWLDILDENR RPIQGGSKLH VRVKFTHVTQ DVNWNKGIIL PSFNGVPNAY FNQREGCKVT LYQDAHVLNE
201: YPDVTLTGGQ VIYKHHRCWE EIFDAIWEAK HLIYIAGWSV NTDVTLVRDP KRTRPGGDLK LGELLKKKAE ENVTVLMLVW DDRTSHEVFK RDGLMMTHDQ
301: ETYDYFKNTK VRCVLCPRNP DNGDSIVQGF EVATMFTHHQ KTIVVDSEVD GSLTKRRIVS FLGGIDLCDG RYDTVEHPLF GTLNSVHAND FHQPNFDGAS
401: IKKGGPREPW HDIHCKLDGP AAWDVLYNFE QRWMKQGSGR RYLISMAQLA EITVPPLPIV QPDNEEGWTV QVFRSIDDGA VEGFPEDPRE AASIGLISGK
501: DNVIERSIQD AYVNAIRRAK NFIYIENQYF LGSSFGWNSR DINLNEINAL QLIPKEISLK IVSKIEAGER FSVYIVIPLW PEGKPGSASV QAILDWQRRT
601: MEMMYTDIII ALRKKGLDAN PRDYLTFFCL GNREKGKVGE YLPPEKPEAN SDYARAQESR RFMIYVHSKM MIVDDEYIII GSANINQRSM DGGRDTEIAM
701: GAYQPSHLLS TNNMRPVGQI FSFRISLWLE HLRVTTNAFQ CPESEECIRM VNATADELWG LYSAQEYPRN DDLPGHLLSY PISIGSNGEV TNLAGTEFFP
801: DTNAKVVGEK SNYLPPILTS

Arabidopsis Description

PLDALPHA3Phospholipase D alpha 3 [Source:UniProtKB/Swiss-Prot;Acc:P58766]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.