Factsheet for Bra009836.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
vacuole 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX88175	Canola	cytosol	77.47	97.44
Bra020497.1-P	Field mustard	cytosol	75.43	85.52
AT5G25370.2	Thale cress	cytosol	73.71	83.78
VIT_04s0008g05450.t01	Wine grape	cytosol	50.97	61.21
Bra021132.1-P	Field mustard	cytosol	52.04	59.73
Bra027209.1-P	Field mustard	cytosol	51.39	59.14
Bra040960.1-P	Field mustard	cytosol	51.18	58.74
PGSC0003DMT400020297	Potato	cytosol	51.5	58.61
Bra030375.1-P	Field mustard	cytosol	50.97	58.5
KRH52443	Soybean	cytosol	51.61	58.23
KRH61774	Soybean	cytosol	21.14	56.45
Solyc12g011170.1.1	Tomato	cytosol	51.29	56.37
KRH52444	Soybean	cytosol, plastid	49.57	56.27
Bra022740.1-P	Field mustard	cytosol, extracellular	6.87	50.79
Bra000752.1-P	Field mustard	cytosol, nucleus, peroxisome	26.72	47.34
Bra034939.1-P	Field mustard	cytosol	36.91	41.3
Bra017730.1-P	Field mustard	cytosol	37.12	41.24
Bra037982.1-P	Field mustard	cytosol	33.37	40.87
Bra010512.1-P	Field mustard	cytosol	35.3	40.77
Bra014871.1-P	Field mustard	cytosol	36.8	40.5
Bra000753.1-P	Field mustard	cytosol	33.8	39.67
Bra033225.1-P	Field mustard	cytosol	37.77	32.9
Bra008515.1-P	Field mustard	mitochondrion, plastid	38.41	24.69
Bra022178.1-P	Field mustard	cytosol, nucleus, peroxisome	21.78	18.94
Bra040531.1-P	Field mustard	cytosol, nucleus, peroxisome	20.82	18.53

Protein Annotations

KEGG:00564+3.1.4.4	KEGG:00565+3.1.4.4	Gene3D:3.30.870.10	MapMan:5.7.2.4.1	EnsemblPlantsGene:Bra009836	EnsemblPlants:Bra009836.1
EnsemblPlants:Bra009836.1-P	InterPro:C2_dom	InterPro:DUF4050	GO:GO:0003674	GO:GO:0003824	GO:GO:0004630
GO:GO:0005488	GO:GO:0005509	GO:GO:0005575	GO:GO:0006629	GO:GO:0008150	GO:GO:0008152
GO:GO:0009056	GO:GO:0009987	GO:GO:0016020	GO:GO:0016042	GO:GO:0016787	GO:GO:0046470
GO:GO:0070290	InterPro:IPR000008	InterPro:IPR001736	UniProt:M4D038	PFAM:PF00168	PFAM:PF00614
PFAM:PF12357	PFAM:PF13259	PIRSF:PIRSF036470	InterPro:PLipase_D/transphosphatidylase	InterPro:PLipase_D_C	InterPro:PLipase_D_fam
InterPro:PLipase_D_pln	PFscan:PS50035	PANTHER:PTHR18896	PANTHER:PTHR18896:SF89	SMART:SM00155	SUPFAM:SSF49562
SUPFAM:SSF56024	UniParc:UPI000253F2E9	SEG:seg	:	:	:

Description

AT5G25370 (E=0.0) PLDALPHA3 | PLDALPHA3 (PHOSPHLIPASE D ALPHA 3); phospholipase D

Coordinates

chrA06:-:17592236..17600417

Molecular Weight (calculated)

105806.0 Da

IEP (calculated)

7.156

GRAVY (calculated)

-0.440

Length

932 amino acids

Sequence
(BLAST)

001: MAEQLLLHGT LEVKIYRIDK LHQRARFNLR GKGDKEPTTG KKIQTQIKRL AASCTDLLGG HLYATIDLDR SRVARTMMRR HTKWFQSFHI YAAHSISKII
101: FTIKEDEPIG ANLIGRAYLP ATEVISGQPV DRWLDVLDQN KRPIQGGVPN AFFNQREGCK VTLYQDAHVL GEYPDITVAG GQAIYIHHRC WEDIFDAIWD
201: AKHLIYITGW SVYPDITLIR DPKRPRPGGN LKLGELLKKK AEENVTVLML VWDDRTSNEA FKRDGLMMTH DQETYDYFKN TKVRCVLCPR NPDNGESIVQ
301: GFGVAAMFTH HQKTIVVDAE VDGLKTKRRI VSFLGGIDLC DGRYDTEEHP LFGTLNNVHS NDFHQPNFDG ASIKKGGPRE PWHDIHCRLD GPAAWDVLYN
401: FEQRWMKQGN GRRYLVSMER FSEITVPPLP IVQPDDVEGW TVQVFRSIDN GAVEGFPEDP REASSVGLVT GKNNVIERSI QDAYINAIRR AKHFIYIESQ
501: YFLGSSFGWN SRDINLNEIN ALHLIPKEIS LKIVSKIEAG ERFSVYIVIP LWPEGKPGSA SVQAILDWQR RTMEMMYTDI IIALRKKGLD ANPRDYLTFF
601: CLGNREVNKA GEYSPPEKPD ANSDYARAQE SRRFMIYVHS KMMIVDDEYV IIGSANINQR SMDGGRDSEI AMGAYQPNHL LATNQLRPRG QVFSFRISLW
701: LEHLRIVTNT FQFPESEECI RMVNAKADEL WGLYSAQVYP RDHDLPGHLL SYPISIGSNG EVTSLAGAEF FPDTNAKYRG CFGSCNKPPP LIVAVDEPSK
801: GLRIQGRLVK KPSVSDDFWS TSTCDMDNNS TMQSQRSVSS ISFTNNTATS ASSSSNPNEF VNTGLNLWNQ TRQQWLASGS SRTKAKVREP TISWNATYES
901: LLGVNKRFSR PIPLPEMVDF LVDVWEQEGL YD

Best Arabidopsis Sequence Match ( AT5G25370.2 )
(BLAST)

001: MTEQLLLHGT LEVKIYRIDK LHQRSRFNLC GKGNKEPTGK KTQSQIKRLT DSCTSLFGGH LYATIDLDRS RVARTMMRRH PKWLQSFHVY TAHSISKIIF
101: TVKEDEPVSA SLIGRAYLPV TEVITGQPID RWLDILDENR RPIQGGSKLH VRVKFTHVTQ DVNWNKGIIL PSFNGVPNAY FNQREGCKVT LYQDAHVLNE
201: YPDVTLTGGQ VIYKHHRCWE EIFDAIWEAK HLIYIAGWSV NTDVTLVRDP KRTRPGGDLK LGELLKKKAE ENVTVLMLVW DDRTSHEVFK RDGLMMTHDQ
301: ETYDYFKNTK VRCVLCPRNP DNGDSIVQGF EVATMFTHHQ KTIVVDSEVD GSLTKRRIVS FLGGIDLCDG RYDTVEHPLF GTLNSVHAND FHQPNFDGAS
401: IKKGGPREPW HDIHCKLDGP AAWDVLYNFE QRWMKQGSGR RYLISMAQLA EITVPPLPIV QPDNEEGWTV QVFRSIDDGA VEGFPEDPRE AASIGLISGK
501: DNVIERSIQD AYVNAIRRAK NFIYIENQYF LGSSFGWNSR DINLNEINAL QLIPKEISLK IVSKIEAGER FSVYIVIPLW PEGKPGSASV QAILDWQRRT
601: MEMMYTDIII ALRKKGLDAN PRDYLTFFCL GNREKGKVGE YLPPEKPEAN SDYARAQESR RFMIYVHSKM MIVDDEYIII GSANINQRSM DGGRDTEIAM
701: GAYQPSHLLS TNNMRPVGQI FSFRISLWLE HLRVTTNAFQ CPESEECIRM VNATADELWG LYSAQEYPRN DDLPGHLLSY PISIGSNGEV TNLAGTEFFP
801: DTNAKVVGEK SNYLPPILTS

Arabidopsis Description

PLDALPHA3Phospholipase D alpha 3 [Source:UniProtKB/Swiss-Prot;Acc:P58766]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.