Factsheet for Bra040960.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
vacuole 1
cytosol 2
mitochondrion 1
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY63527	Canola	cytosol	41.01	99.7
CDY47540	Canola	cytosol	99.51	99.51
Bra030375.1-P	Field mustard	cytosol	94.46	94.46
AT1G52570.1	Thale cress	cytosol	93.23	93.46
CDX87920	Canola	cytosol	39.41	93.29
Bra027209.1-P	Field mustard	cytosol	84.85	85.06
Bra021132.1-P	Field mustard	cytosol	82.76	82.76
VIT_09s0002g06760.t01	Wine grape	cytosol	79.56	79.56
PGSC0003DMT400073469	Potato	cytosol	78.45	78.74
Solyc06g068090.2.1	Tomato	plastid	77.71	78.0
TraesCS3A01G130000.1	Wheat	plastid	77.34	77.34
TraesCS3B01G149100.1	Wheat	unclear	77.34	77.34
TraesCS3D01G130900.1	Wheat	golgi	77.34	77.34
HORVU3Hr1G024530.2	Barley	plastid	77.09	77.09
Os01t0172400-03	Rice	plastid	76.97	76.97
KXG31749	Sorghum	cytosol	76.97	76.97
Zm00001d039670_P004	Maize	cytosol	76.85	76.85
GSMUA_Achr7P10170_001	Banana	cytosol	50.74	76.3
Zm00001d008727_P002	Maize	cytosol	75.74	75.74
EES17463	Sorghum	cytosol	75.74	75.65
PGSC0003DMT400001650	Potato	cytosol, plastid	74.63	74.72
KRH09736	Soybean	cytosol, endoplasmic reticulum, nucleus	65.15	74.4
Solyc03g116620.2.1	Tomato	plastid	74.26	74.35
OQU77524	Sorghum	plastid	71.18	70.4
TraesCS1D01G116700.1	Wheat	cytosol	70.32	70.06
TraesCS1A01G115300.1	Wheat	cytosol	69.95	69.69
Os05t0171000-01	Rice	plasma membrane	70.57	69.54
TraesCS1B01G135200.1	Wheat	cytosol	69.33	68.83
KRH09735	Soybean	cytosol	38.67	67.67
HORVU1Hr1G025370.1	Barley	cytosol	70.2	66.67
Zm00001d037643_P001	Maize	cytosol	70.32	63.02
GSMUA_Achr10P...	Banana	cytosol, plastid	34.24	60.83
Bra020497.1-P	Field mustard	cytosol	61.45	60.71
Bra009836.1-P	Field mustard	cytosol	58.74	51.18
Bra022740.1-P	Field mustard	cytosol, extracellular	7.51	48.41
Bra000752.1-P	Field mustard	cytosol, nucleus, peroxisome	30.3	46.77
Bra034939.1-P	Field mustard	cytosol	44.21	43.1
Bra014871.1-P	Field mustard	cytosol	44.83	42.98
Bra037982.1-P	Field mustard	cytosol	39.66	42.31
Bra017730.1-P	Field mustard	cytosol	43.72	42.31
Bra000753.1-P	Field mustard	cytosol	41.13	42.07
Bra010512.1-P	Field mustard	cytosol	41.5	41.76
Bra033225.1-P	Field mustard	cytosol	46.55	35.33
Bra008515.1-P	Field mustard	mitochondrion, plastid	45.81	25.66
Bra040531.1-P	Field mustard	cytosol, nucleus, peroxisome	24.63	19.1
Bra022178.1-P	Field mustard	cytosol, nucleus, peroxisome	24.88	18.84

Protein Annotations

KEGG:00564+3.1.4.4	KEGG:00565+3.1.4.4	Gene3D:2.60.40.150	Gene3D:3.30.870.10	MapMan:5.7.2.4.1	EnsemblPlantsGene:Bra040960
EnsemblPlants:Bra040960.1	EnsemblPlants:Bra040960.1-P	InterPro:C2_dom	InterPro:C2_domain_sf	GO:GO:0003674	GO:GO:0003824
GO:GO:0004630	GO:GO:0005488	GO:GO:0005509	GO:GO:0005575	GO:GO:0006629	GO:GO:0008150
GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0016020	GO:GO:0016042	GO:GO:0016787
GO:GO:0046470	GO:GO:0070290	InterPro:IPR000008	InterPro:IPR001736	InterPro:IPR035892	UniProt:M4FIN1
PFAM:PF00168	PFAM:PF00614	PFAM:PF12357	PIRSF:PIRSF036470	InterPro:PLipase_D/transphosphatidylase	InterPro:PLipase_D_C
InterPro:PLipase_D_fam	InterPro:PLipase_D_pln	PFscan:PS50035	PANTHER:PTHR18896	PANTHER:PTHR18896:SF109	SMART:SM00155
SMART:SM00239	SUPFAM:SSF49562	SUPFAM:SSF56024	UniParc:UPI000253EAE1	SEG:seg	:

Description

AT1G52570 (E=0.0) PLDALPHA2 | PLDALPHA2 (phosphlipase d alpha 2); phospholipase D

Coordinates

chrScaffold000338:+:15980..19268

Molecular Weight (calculated)

92028.4 Da

IEP (calculated)

5.947

GRAVY (calculated)

-0.422

Length

812 amino acids

Sequence
(BLAST)

001: MEEFLLHGRL HATIYEVDSL HGSEGGRSGF FGKILANVEE TIGVGKGEPQ LYATIDLEKA RVGRTRKITN EPNNPKWHES FHIYCGHMAK HVIFTVKDDN
101: PIGATLIGRA YIPVEDILHG EEVDRWVEIL DTEKKPVEGG SKIHVKLQYF GVEKDKNWNR GIKSVKFPGV PYTFFSQRRG CKVSLYQDAH IPGNFVPKIP
201: LAGGKYYEAN RCWEDIFDAI TNAKHLIYIT GWSVYAEISL VRDSRRPKEG GDVTIGEILK KKASEGVKVI LLVWDDRTSV DLLKQDGLMA THDEETENFF
301: QGTDVNCVLC PRNPDDGGSI VQNLQVSTMF THHQKIVVVD SEMPGGSSRT KSRRIVSFIG GLDLCDGRYD TPFHSLFRTL DTVHHDDFHQ PNFPGAAITK
401: GGPREPWHDI HCRLEGAIAW DVLYNFEQRW NRQGGKDILV KIRDLDDIII PPSPVLFSED HDSWNVQLFR SIDGGAAAAF PDSPEAAAEA GLVSGKDNII
501: DRSIQDAYIH AIRRAKDFIY IENQYFLGSS FAWSADGIKP EEINALHLIP KELSLKIVSK IKAGERFKVY VVVPMWPEGI PESGSVQAIL DWQRRTMEMM
601: YKDVIKALRE KGLEEDPRDY LTFFCLGNRE VKKDGEYEPT EKPEPDSDYI RAQEARRFMI YVHTKMMIVD DEYIIIGSAN INQRSMDGAR DSEIAMGGYQ
701: PYHLSVRQPA RGQIHGFRMS LWYEHLGMLD ETFLDPSSQE CVKKVNRVAD KYWDLYSSES LEHDLPGHLL RYPIGIASQG DITELPGCEC FPDTKARILG
801: TKSDYMPPIL TT

Best Arabidopsis Sequence Match ( AT1G52570.2 )
(BLAST)

001: MEECLLHGRL HATIYEVDHL HAEGGRSGFL GSILANVEET IGVGKGETQL YATIDLEKAR VGRTRKITKE PKNPKWFESF HIYCGHMAKH VIFTVKDANP
101: IGATLIGRGY IPVEDILHGE EVDRWVDILD NEKNPIAGGS KIHVKLQYFG VEKDKNWNRG IKSAKFPGVP YTFFSQRRGC KVSLYQDAHI PGNFVPKIPL
201: AGGKNYEPHR CWEDIFDAIT NAKHLIYITG WSVYTEISLV RDSRRPKQGG DVTVGELLKK KASEGVKVIL LVWDDRTSVD LLKKDGLMAT HDEETENFFR
301: GTDVNCILCP RNPDDGGSIV QNLQISTMFT HHQKIVVVDS EMPSGGSRSR RIVSFVGGLD LCDGRYDTPF HSLFRTLDTA HHDDFHQPNF TGAAITKGGP
401: REPWHDIHCR LEGPIAWDVL YNFEQRWSRQ GGKDILVKMR ELGDIIIPPS PVLFSEDHDV WNVQLFRSID GGAAAGFPDS PEAAAEAGLV SGKDNIIDRS
501: IQDAYIHAIR RAKDFIYIEN QYFLGSSFAW SADGIKPEEI NALHLIPKEL SLKIVSKIKA GEKFKVYVVV PMWPEGIPES GSVQAILDWQ KRTMEMMYKD
601: VIKALRENGL EGEDPRDYLT FFCLGNREVK KDGEYEPSEK PEPDTDYIRA QEARRFMIYV HTKMMIVDDE YIIIGSANIN QRSMDGARDS EIAMGGYQPY
701: HLSTRQPARG QIHGFRMSLW YEHLGMLDET FLDPSSQECI QKVNRVADKY WDLYSSESLE HDLPGHLLRY PIGIASEGNI TELPGCEFFP DTKARILGVK
801: SDYMPPILTT

Arabidopsis Description

PLDALPHA2Phospholipase D alpha 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SSQ9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.