Factsheet for VIT_09s0002g06760.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
vacuole 2
cytosol 2
endoplasmic reticulum 1
mitochondrion 1
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AT3G15730.1	Thale cress	cytosol	80.91	81.11
PGSC0003DMT400073469	Potato	cytosol	80.79	81.09
KXG31749	Sorghum	cytosol	80.91	80.91
CDY20149	Canola	cytosol, nucleus, peroxisome	21.18	80.75
Zm00001d039670_P004	Maize	cytosol	80.67	80.67
Solyc06g068090.2.1	Tomato	plastid	80.05	80.35
Zm00001d008727_P002	Maize	cytosol	80.3	80.3
Bra027209.1-P	Field mustard	cytosol	80.05	80.25
Bra030375.1-P	Field mustard	cytosol	80.17	80.17
CDX97705	Canola	cytosol	79.93	80.12
CDY60551	Canola	cytosol	80.05	80.05
AT1G52570.1	Thale cress	cytosol	79.8	80.0
CDY30108	Canola	cytosol	79.8	80.0
GSMUA_Achr7P10170_001	Banana	cytosol	53.2	80.0
TraesCS3D01G130900.1	Wheat	golgi	79.93	79.93
TraesCS3A01G130000.1	Wheat	plastid	79.93	79.93
CDY21865	Canola	cytosol	79.8	79.8
TraesCS3B01G149100.1	Wheat	unclear	79.68	79.68
Os01t0172400-03	Rice	plastid	79.68	79.68
Bra021132.1-P	Field mustard	cytosol	79.56	79.56
Bra040960.1-P	Field mustard	cytosol	79.56	79.56
CDY47540	Canola	cytosol	79.56	79.56
HORVU3Hr1G024530.2	Barley	plastid	79.43	79.43
EES17463	Sorghum	cytosol	78.69	78.6
KRH09736	Soybean	cytosol, endoplasmic reticulum, nucleus	68.6	78.34
PGSC0003DMT400001650	Potato	cytosol, plastid	76.85	76.94
Solyc03g116620.2.1	Tomato	plastid	75.86	75.96
CDX87920	Canola	cytosol	31.65	74.93
CDY63527	Canola	cytosol	30.79	74.85
VIT_11s0016g05370.t01	Wine grape	cytosol	73.4	73.31
CDY20148	Canola	cytosol, peroxisome, plastid	35.71	72.68
TraesCS1D01G116700.1	Wheat	cytosol	72.78	72.52
VIT_11s0016g05360.t01	Wine grape	cytosol	73.03	72.49
OQU77524	Sorghum	plastid	73.15	72.35
TraesCS1A01G115300.1	Wheat	cytosol	72.41	72.15
Os05t0171000-01	Rice	plasma membrane	73.15	72.09
TraesCS1B01G135200.1	Wheat	cytosol	71.43	70.9
KRH09735	Soybean	cytosol	39.9	69.83
HORVU1Hr1G025370.1	Barley	cytosol	72.91	69.24
VIT_04s0008g05450.t01	Wine grape	cytosol	65.02	68.04
GSMUA_Achr10P...	Banana	cytosol, plastid	36.58	64.99
Zm00001d037643_P001	Maize	cytosol	72.29	64.79
VIT_12s0035g00200.t01	Wine grape	cytosol, nucleus, peroxisome	39.41	50.63
VIT_09s0002g02390.t01	Wine grape	cytosol	42.73	46.14
VIT_02s0025g04620.t01	Wine grape	cytosol	45.44	43.41
VIT_18s0001g00770.t01	Wine grape	nucleus	45.94	42.63
VIT_00s0264g00100.t01	Wine grape	cytosol	45.81	42.61
VIT_15s0048g01160.t01	Wine grape	cytosol	44.83	33.49
VIT_00s0264g00090.t01	Wine grape	cytosol	12.56	32.28
VIT_05s0077g01830.t01	Wine grape	cytosol	25.74	18.8

Protein Annotations

KEGG:00564+3.1.4.4	KEGG:00565+3.1.4.4	EntrezGene:100232987	wikigene:100232987	Gene3D:2.60.40.150	Gene3D:3.30.870.10
MapMan:5.7.2.4.1	ProteinID:ABC59316	ProteinID:ABC59316.1	InterPro:C2_dom	InterPro:C2_domain_sf	ProteinID:CCB59598
ProteinID:CCB59598.1	EMBL:DQ333882	UniProt:F6HXC8	EMBL:FN596494	GO:GO:0003674	GO:GO:0003824
GO:GO:0004630	GO:GO:0005488	GO:GO:0005509	GO:GO:0005575	GO:GO:0006629	GO:GO:0008150
GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0016020	GO:GO:0016042	GO:GO:0016787
GO:GO:0046470	GO:GO:0070290	InterPro:IPR000008	InterPro:IPR001736	InterPro:IPR035892	PFAM:PF00168
PFAM:PF00614	PFAM:PF12357	PIRSF:PIRSF036470	EntrezGene:PLD	wikigene:PLD	InterPro:PLipase_D/transphosphatidylase
InterPro:PLipase_D_C	InterPro:PLipase_D_fam	InterPro:PLipase_D_pln	PFscan:PS50035	PANTHER:PTHR18896	PANTHER:PTHR18896:SF109
SMART:SM00155	SMART:SM00239	SUPFAM:SSF49562	SUPFAM:SSF56024	TIGR:TC57844	UniParc:UPI00015CD0E2
ArrayExpress:VIT_09s0002g06760	EnsemblPlantsGene:VIT_09s0002g06760	EnsemblPlants:VIT_09s0002g06760.t01	unigene:Vvi.8064	:	:

Description

Phospholipase D [Source:UniProtKB/TrEMBL;Acc:F6HXC8]

Coordinates

chr9:+:6678995..6685489

Molecular Weight (calculated)

92263.7 Da

IEP (calculated)

5.572

GRAVY (calculated)

-0.410

Length

812 amino acids

Sequence
(BLAST)

001: MSEFNEIPLH GTLHATIFEI DRLHSGGAPK FFRKLVENIE ETVGFGKGTS KLYATIDIGR ARVGRTRMIE NEPSNPRWYE SFHIYCAHMA GHIIFTVKDD
101: NPIGATLIGR ASVPIQEILG GEEVDKWVEI VNEELKPIHG GSKIHVKLQY FEVTADRSWG RGIRSLKFPG VPFTFFSQRK GCHVSLYQDA HVPDNFVPKI
201: PLADGKYYEP RRCWEDVFDA INNAKHLIYI TGWSVYTEIT LVRDSRRPKP GGDLTIGELL KKKASEGVRV LMLVWDDRTS VPLLKKDGLM GTHDEETEHY
301: FHDTDVHCVL CPRNPDDGGS IVQDLQISTM FTHHQKIVVV DSEMPSGGSE KRRIVSFVGG IDLCDGRYDT QFHSLFRTLD TAHHDDFHQP NFEGASIQKG
401: GPREPWHDIH SRLEGPIAWD VLFNFEQRWR KQGGKDILLQ LRDLDDVIIP PSPVMFPDDQ EVWNVQLFRS IDGGAAFGFP ETPEEAARAG LVSGKDNIID
501: RSIQDAYINA IRRAKDFIYI ENQYFLGSSF GWAPDEGIKI EDVGALHLIP KELSLKIASK IEAGEKFTVY IVVPMWPEGM PESGSVQAIL DWQRRTMEMM
601: YKDIIKALAD KGIEDDPRNY LTFFCLGNRE VKKSGEYEPS EHPEPDTDYS RAQEARRFMI YVHAKMMIVD DEYIIIGSAN INQRSMDGAR DSEIAMGGYQ
701: PYHLASRQPA RGQIHGFRMS LWYEHLGMLD ESFLQPESKE CIQKVNQIAE KYWDLYASET LEHDLPGHLL RYPIAVSCGG DITELPGAEF FPDTKARVLG
801: TKSEYLPPIL TT

Best Arabidopsis Sequence Match ( AT3G15730.1 )
(BLAST)

001: MAQHLLHGTL HATIYEVDAL HGGGVRQGFL GKILANVEET IGVGKGETQL YATIDLQKAR VGRTRKIKNE PKNPKWYESF HIYCAHLASD IIFTVKDDNP
101: IGATLIGRAY IPVDQVINGE EVDQWVEILD NDRNPIQGGS KIHVKLQYFH VEEDRNWNMG IKSAKFPGVP YTFFSQRQGC KVSLYQDAHI PDNFVPRIPL
201: AGGKNYEPQR CWEDIFDAIS NAKHLIYITG WSVYAEIALV RDSRRPKPGG DVTIGELLKK KASEGVRVLL LVWDDRTSVD VLKKDGLMAT HDEETENFFR
301: GSDVHCILCP RNPDDGGSIV QSLQISTMFT HHQKIVVVDS EMPSRGGSEM RRIVSFVGGI DLCDGRYDTP FHSLFRTLDT VHHDDFHQPN FTGAAITKGG
401: PREPWHDIHS RLEGPIAWDV MYNFEQRWSK QGGKDILVKL RDLSDIIITP SPVMFQEDHD VWNVQLFRSI DGGAAAGFPE SPEAAAEAGL VSGKDNIIDR
501: SIQDAYIHAI RRAKDFIYVE NQYFLGSSFA WAADGITPED INALHLIPKE LSLKIVSKIE KGEKFRVYVV VPMWPEGLPE SGSVQAILDW QRRTMEMMYK
601: DVIQALRAQG LEEDPRNYLT FFCLGNREVK KDGEYEPAEK PDPDTDYMRA QEARRFMIYV HTKMMIVDDE YIIIGSANIN QRSMDGARDS EIAMGGYQPH
701: HLSHRQPARG QIHGFRMSLW YEHLGMLDET FLDPSSLECI EKVNRISDKY WDFYSSESLE HDLPGHLLRY PIGVASEGDI TELPGFEFFP DTKARILGTK
801: SDYLPPILTT

Arabidopsis Description

PLDALPHA1Phospholipase D alpha 1 [Source:UniProtKB/Swiss-Prot;Acc:Q38882]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.