Factsheet for VIT_05s0077g01830.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 4
peroxisome 1
plastid 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc01g065720.2.1	Tomato	cytosol	77.07	77.49
KRH12101	Soybean	plastid	77.97	77.2
KRH37058	Soybean	plastid	78.15	77.18
CDX92096	Canola	nucleus	74.28	76.34
CDX95904	Canola	cytosol, nucleus, peroxisome	74.19	75.83
Bra022178.1-P	Field mustard	cytosol, nucleus, peroxisome	72.75	75.47
AT3G16785.4	Thale cress	plastid	74.73	72.96
OQU77834	Sorghum	endoplasmic reticulum, golgi	42.9	69.23
Zm00001d009075_P001	Maize	cytosol, nucleus, peroxisome	57.82	67.76
TraesCS1B01G242500.1	Wheat	cytosol, nucleus, peroxisome	68.8	67.64
TraesCS1D01G230100.1	Wheat	cytosol, nucleus, peroxisome	68.8	67.64
KXG32384	Sorghum	cytosol, nucleus, peroxisome	67.9	67.35
TraesCS1A01G228300.1	Wheat	cytosol, nucleus, peroxisome	66.82	66.76
Zm00001d037946_P001	Maize	cytosol, mitochondrion, nucleus, peroxisome	68.97	66.18
OQU77836	Sorghum	cytosol	27.52	63.88
GSMUA_Achr11P...	Banana	mitochondrion	10.07	63.64
CDY51604	Canola	cytosol	16.1	63.48
HORVU1Hr1G059050.25	Barley	plastid	66.19	63.28
Os05t0358700-01	Rice	cytosol, plasma membrane	6.92	44.25
VIT_12s0035g00200.t01	Wine grape	cytosol, nucleus, peroxisome	16.1	28.32
VIT_04s0008g05450.t01	Wine grape	cytosol	19.69	28.22
VIT_09s0002g02390.t01	Wine grape	cytosol	17.72	26.2
VIT_09s0002g06760.t01	Wine grape	cytosol	18.8	25.74
VIT_11s0016g05370.t01	Wine grape	cytosol	18.44	25.22
VIT_11s0016g05360.t01	Wine grape	cytosol	18.17	24.69
VIT_18s0001g00770.t01	Wine grape	nucleus	19.15	24.34
VIT_02s0025g04620.t01	Wine grape	cytosol	18.26	23.88
VIT_00s0264g00100.t01	Wine grape	cytosol	18.26	23.25
VIT_15s0048g01160.t01	Wine grape	cytosol	18.26	18.68
VIT_00s0264g00090.t01	Wine grape	cytosol	5.22	18.35

Protein Annotations

KEGG:00564+3.1.4.4	KEGG:00565+3.1.4.4	EntrezGene:100261987	wikigene:100261987	Gene3D:2.30.29.30	Gene3D:3.30.870.10
MapMan:5.7.2.4.5	ProteinID:CCB48017	ProteinID:CCB48017.1	ncoils:Coil	UniProt:F6H6X5	EMBL:FN595246
GO:GO:0003674	GO:GO:0003824	GO:GO:0004630	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0006629	GO:GO:0006654	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150
GO:GO:0008152	GO:GO:0008289	GO:GO:0009056	GO:GO:0009058	GO:GO:0009987	GO:GO:0016042
GO:GO:0016787	GO:GO:0035091	GO:GO:0048017	GO:GO:0070290	InterPro:IPR001736	InterPro:IPR001849
InterPro:IPR011993	EntrezGene:LOC100261987	wikigene:LOC100261987	PFAM:PF00614	PFAM:PF13091	InterPro:PH-like_dom_sf
InterPro:PH_domain	PIRSF:PIRSF009376	InterPro:PLD-like_dom	InterPro:PLipase_D/transphosphatidylase	InterPro:PLipase_D_euk	InterPro:PLipase_D_fam
PFscan:PS50003	PFscan:PS50035	PANTHER:PTHR18896	PANTHER:PTHR18896:SF111	SMART:SM00155	SMART:SM00233
SUPFAM:SSF50729	SUPFAM:SSF56024	UniParc:UPI0002109ABE	ArrayExpress:VIT_05s0077g01830	EnsemblPlantsGene:VIT_05s0077g01830	EnsemblPlants:VIT_05s0077g01830.t01
RefSeq:XP_002272864	RefSeq:XP_002272864.1	SEG:seg	:	:	:

Description

Phospholipase [Source:UniProtKB/TrEMBL;Acc:F6H6X5]

Coordinates

chr5:-:1434330..1452682

Molecular Weight (calculated)

126952.0 Da

IEP (calculated)

7.038

GRAVY (calculated)

-0.410

Length

1112 amino acids

Sequence
(BLAST)

0001: MQSEPMPSTI SSFFSFRQSP ESTRIFDELP KATIVFVSRP DASDISPALL TYTIEFRYKQ WRLIKKASQV FFLHFALKKR VIIEEIQEKQ EQVKEWLQNI
0101: GIGEHTAVVH DDDEPDEETV PLHHDESVKN RDIPSSAALP IIRPALGRQN SVSDRAKVAM QGYLNLFLGN LDIVNSREVC KFLEVSKLSF SPEYGPKLKE
0201: DYVMVKHLPK IPKEDDTRKC CPCPWFSCCN DNWQKVWAVL KPGFLALLED PFHPQPLDII VFDLLPASDG NGEGRLSLAK EIKERNPLRH ALKVTCGNRS
0301: IRLRAKSSAK VKDWVAAIND AGLRPPEGWC HPHRFGSFAP PRGLSEDGSL AQWFVDGRAA FEAIASAIEE AKSEIFICGW WVCPELYLRR PFHSHASSRL
0401: DALLEAKAKQ GVQIYILLYK EVALALKINS VYSKRKLLSI HENVRVLRYP DHFSTGVYLW SHHEKLVIVD YQICFIGGLD LCFGRYDTLE HKVGDHPPLM
0501: WPGKDYYNPR QRLSFPCKHM GDKLHSLESE PNSWEDTMKD ELDRGKYPRM PWHDVHCALW GPPCRDVARH FVQRWNYAKR NKAPNEQAIP LLMPQQHMVI
0601: PHYMGRSREM EVEKKNVENN YKDIKKLDSF SSRSSFQDIP LLLPQEPDGL DSPHGESKLN GFDSSSNLLD QPTRVSRSLS FSFRKSKIEP VPDMPMKGFV
0701: DDLDTLDLKG KMSSDIMAQP GMRTCDREWW ETQERGNQVL SADETGQVGP CVPCRCQVIR SVSQWSAGTS QVEDSTHNAY CSLIEKAEHF IYIENQFFIS
0801: GLSGDEIIRN RVLEVLYRRI MQAYNDKKCF RVIIVIPLLP GFQGGLDDGG AASVRAIMHW QYRTICRGNN SILQNLYDVI GHKTHDYISF YGLRAYGRLF
0901: DGGPVASSQV YVHSKIMIVD DCTTLIGSAN INDRSLLGSR DSEIGVLIED KELVDSYMGG KPKKAGKFAH SLRLSLWSEH LGLRGGEIDQ IKDPVVDSTY
1001: RDVWMATAKT NSTIYQDVFS CIPNDLIHSR AAMRQHMAIW KEKLGHTTID LGIAPMKLES YDNGDMKTIE PMERLESVKG HLVYFPLDFM CKEDLRPVFN
1101: ESEYYASPQV FH

Best Arabidopsis Sequence Match ( AT3G16785.1 )
(BLAST)

0001: MASEQLMSPA SGGGRYFQMQ PEQFPSMVSS LFSFAPAPTQ ETNRIFEELP KAVIVSVSRP DAGDISPVLL SYTIECQYKQ FKWQLVKKAS QVFYLHFALK
0101: KRAFIEEIHE KQEQVKEWLQ NLGIGDHPPV VQDEDADEVP LHQDESAKNR DVPSSAALPV IRPLGRQQSI SVRGKHAMQE YLNHFLGNLD IVNSREVCRF
0201: LEVSMLSFSP EYGPKLKEDY IMVKHLPKFS KSDDDSNRCC GCCWFCCCND NWQKVWGVLK PGFLALLEDP FDAKLLDIIV FDVLPVSNGN DGVDISLAVE
0301: LKDHNPLRHA FKVTSGNRSI RIRAKNSAKV KDWVASINDA ALRPPEGWCH PHRFGSYAPP RGLTDDGSQA QWFVDGGAAF AAIAAAIENA KSEIFICGWW
0401: VCPELYLRRP FDPHTSSRLD NLLENKAKQG VQIYILIYKE VALALKINSV YSKRRLLGIH ENVRVLRYPD HFSSGVYLWS HHEKLVIVDN QVCFIGGLDL
0501: CFGRYDTFEH KVGDNPSVTW PGKDYYNPRE SEPNTWEDAL KDELERKKHP RMPWHDVHCA LWGPPCRDVA RHFVQRWNYA KRNKAPYEDS IPLLMPQHHM
0601: VIPHYMGRQE ESDIESKKEE DSIRGIRRDD SFSSRSSLQD IPLLLPHEPV DQDGSSGGHK ENGTNNRNGP FSFRKSKIEP VDGDTPMRGF VDDRNGLDLP
0701: VAKRGSNAID SEWWETQDHD YQVGSPDETG QVGPRTSCRC QIIRSVSQWS AGTSQVEESI HSAYRSLIDK AEHFIYIENQ FFISGLSGDD TVKNRVLEAL
0801: YKRILRAHNE KKIFRVVVVI PLLPGFQGGI DDSGAASVRA IMHWQYRTIY RGHNSILTNL YNTIGVKAHD YISFYGLRAY GKLSEDGPVA TSQVYVHSKI
0901: MIVDDRAALI GSANINDRSL LGSRDSEIGV LIEDTELVDS RMAGKPWKAG KFSSSLRLSL WSEHLGLRTG EIDQIIDPVS DSTYKEIWMA TAKTNTMIYQ
1001: DVFSCVPNDL IHSRMAFRQS LSYWKEKLGH TTIDLGIAPE KLESYHNGDI KRSDPMDRLK AIKGHLVSFP LDFMCKEDLR PVFNESEYYA SPQVFH

Arabidopsis Description

PLDP1Phospholipase D P1 [Source:UniProtKB/TrEMBL;Acc:A0A1I9LQ40]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.