Factsheet for VIT_11s0016g05360.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
extracellular 1
cytosol 2
endoplasmic reticulum 1
vacuole 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_11s0016g05370.t01	Wine grape	cytosol	87.53	88.07
VIT_09s0002g06760.t01	Wine grape	cytosol	72.49	73.03
VIT_04s0008g05450.t01	Wine grape	cytosol	61.37	64.69
VIT_12s0035g00200.t01	Wine grape	cytosol, nucleus, peroxisome	39.24	50.79
VIT_09s0002g02390.t01	Wine grape	cytosol	41.2	44.81
VIT_18s0001g00770.t01	Wine grape	nucleus	46.21	43.2
VIT_00s0264g00100.t01	Wine grape	cytosol	45.84	42.96
VIT_02s0025g04620.t01	Wine grape	cytosol	43.89	42.24
VIT_15s0048g01160.t01	Wine grape	cytosol	43.4	32.66
VIT_00s0264g00090.t01	Wine grape	cytosol	12.59	32.59
VIT_05s0077g01830.t01	Wine grape	cytosol	24.69	18.17

Protein Annotations

KEGG:00564+3.1.4.4	KEGG:00565+3.1.4.4	EntrezGene:100261040	wikigene:100261040	Gene3D:2.60.40.150	Gene3D:3.30.870.10
MapMan:5.7.2.4.1	EMBL:AM444235	InterPro:C2_dom	InterPro:C2_domain_sf	ProteinID:CAN76339	ProteinID:CAN76339.1
ProteinID:CCB51589	ProteinID:CCB51589.1	UniProt:F6HH93	EMBL:FN595756	GO:GO:0003674	GO:GO:0003824
GO:GO:0004630	GO:GO:0005488	GO:GO:0005509	GO:GO:0005575	GO:GO:0006629	GO:GO:0008150
GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0016020	GO:GO:0016042	GO:GO:0016787
GO:GO:0046470	GO:GO:0070290	InterPro:IPR000008	InterPro:IPR001736	InterPro:IPR035892	EntrezGene:LOC100261040
wikigene:LOC100261040	PFAM:PF00168	PFAM:PF00614	PFAM:PF12357	PIRSF:PIRSF036470	InterPro:PLipase_D/transphosphatidylase
InterPro:PLipase_D_C	InterPro:PLipase_D_fam	InterPro:PLipase_D_pln	PFscan:PS50035	PANTHER:PTHR18896	PANTHER:PTHR18896:SF85
SMART:SM00155	SMART:SM00239	SUPFAM:SSF49562	SUPFAM:SSF56024	UniParc:UPI00021087AD	ArrayExpress:VIT_11s0016g05360
EnsemblPlantsGene:VIT_11s0016g05360	EnsemblPlants:VIT_11s0016g05360.t01	RefSeq:XP_002285226	RefSeq:XP_002285226.2	SEG:seg	:

Description

Phospholipase D [Source:UniProtKB/TrEMBL;Acc:F6HH93]

Coordinates

chr11:+:4695215..4699274

Molecular Weight (calculated)

92834.8 Da

IEP (calculated)

6.960

GRAVY (calculated)

-0.385

Length

818 amino acids

Sequence
(BLAST)

001: MMEQSLVHGT LHATIYEVDG LSTGGPWNFI QKVYTTLSKR IVGAPISKIY VTIDLEKAGV GRTSKLDNED SNPRWYQSFH IYCAHKASHV VFSVKQDNPI
101: GATVIGRAHL PVGELLEGEV DRWLELFHHD HTPINGGSKL HVKLQFVDVT REFNWSRGIR SPKFPGVPYT FFPQRKGCRV LLYQDAHVPN KFIPKIPLSG
201: GKCYEPHQCW EDIFHAISNA KHLVYITGWS LYTKTTLVRY SRGQKPGEHA TLGELFRKKT LTLGELLKKK ASEGVTVLML LWEDRTSVKL LKKDGLMATH
301: GEDTGKYFHG TGVHCVLCPR NPDNGLSIVQ DIEISAMFTH HQKIVVVDSE MPNGGSEHRR IVSFIGGFDL CDGRYDTPTH SIFRTLDTVH HNDFRQANFP
401: NASISKGGPR EPWHDIHCRL EGAIAWDVLF NFEQRWRKQG GKDLLVQLRE LDDIIIPPSP VMFPEDHETW NVQLFRSIDG GAAFGFPDSP EDAARAGLIC
501: GNDHIIDRSI QDAYINAIRR AKNFIYIENQ YFLGSSFGWN LDGLKVEDIG ALHLIPKELS LKIVSKIEAG ERFSVYVVIP MWPEGVPESS CAQVILNWQK
601: RTMEMMYNDI AQALHSKGLQ ANPKDYLAFF CLGNREKKRH GEYEPPESPD HDTNYHRAQQ SRRFMIYVHA KMMIVDDEYI ITGSANINQR SMDGARDSEI
701: AMGAYQPYHL ASKQPARGHI HGFRMALWYE HLGLLDNSFL QPESLDCIQK VNQMAERNWN LYTSERMDHD LPGHLLSYPI CVTDSGEVTE LPGSEFFPDT
801: KAPVLGSKSE YIPPMLTT

Best Arabidopsis Sequence Match ( AT1G52570.2 )
(BLAST)

001: MEECLLHGRL HATIYEVDHL HAEGGRSGFL GSILANVEET IGVGKGETQL YATIDLEKAR VGRTRKITKE PKNPKWFESF HIYCGHMAKH VIFTVKDANP
101: IGATLIGRGY IPVEDILHGE EVDRWVDILD NEKNPIAGGS KIHVKLQYFG VEKDKNWNRG IKSAKFPGVP YTFFSQRRGC KVSLYQDAHI PGNFVPKIPL
201: AGGKNYEPHR CWEDIFDAIT NAKHLIYITG WSVYTEISLV RDSRRPKQGG DVTVGELLKK KASEGVKVIL LVWDDRTSVD LLKKDGLMAT HDEETENFFR
301: GTDVNCILCP RNPDDGGSIV QNLQISTMFT HHQKIVVVDS EMPSGGSRSR RIVSFVGGLD LCDGRYDTPF HSLFRTLDTA HHDDFHQPNF TGAAITKGGP
401: REPWHDIHCR LEGPIAWDVL YNFEQRWSRQ GGKDILVKMR ELGDIIIPPS PVLFSEDHDV WNVQLFRSID GGAAAGFPDS PEAAAEAGLV SGKDNIIDRS
501: IQDAYIHAIR RAKDFIYIEN QYFLGSSFAW SADGIKPEEI NALHLIPKEL SLKIVSKIKA GEKFKVYVVV PMWPEGIPES GSVQAILDWQ KRTMEMMYKD
601: VIKALRENGL EGEDPRDYLT FFCLGNREVK KDGEYEPSEK PEPDTDYIRA QEARRFMIYV HTKMMIVDDE YIIIGSANIN QRSMDGARDS EIAMGGYQPY
701: HLSTRQPARG QIHGFRMSLW YEHLGMLDET FLDPSSQECI QKVNRVADKY WDLYSSESLE HDLPGHLLRY PIGIASEGNI TELPGCEFFP DTKARILGVK
801: SDYMPPILTT

Arabidopsis Description

PLDALPHA2Phospholipase D alpha 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SSQ9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.