Factsheet for VIT_00s0264g00100.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
vacuole 1
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400009253	Potato	cytosol	21.88	73.18
KRH28860	Soybean	mitochondrion	72.16	72.75
KRH76589	Soybean	extracellular	71.82	72.57
AT4G35790.1	Thale cress	cytosol	70.45	70.85
Bra017730.1-P	Field mustard	cytosol	67.7	70.44
Solyc02g083340.2.1	Tomato	nucleus	69.87	70.44
VIT_18s0001g00770.t01	Wine grape	nucleus	70.56	70.4
Zm00001d006262_P001	Maize	cytoskeleton, cytosol, peroxisome	12.37	70.13
CDX72557	Canola	cytosol	69.42	70.06
Solyc02g061850.2.1	Tomato	cytosol	67.81	69.65
GSMUA_Achr1P07360_001	Banana	cytosol	58.19	69.4
GSMUA_AchrUn_...	Banana	cytosol	68.04	69.23
CDY47037	Canola	cytosol	70.1	69.15
VIT_12s0035g00200.t01	Wine grape	cytosol, nucleus, peroxisome	49.83	68.83
KXG36094	Sorghum	cytosol	67.35	68.45
Os09t0543100-02	Rice	plasma membrane	66.67	68.15
Bra010512.1-P	Field mustard	cytosol	62.66	67.78
PGSC0003DMT400009250	Potato	cytosol	42.73	67.45
TraesCS5A01G337100.2	Wheat	cytosol	66.09	66.94
CDY67335	Canola	cytosol	66.32	66.86
Zm00001d006257_P009	Maize	cytosol	65.52	66.82
TraesCS5B01G336100.1	Wheat	cytosol	65.86	66.71
GSMUA_Achr1P14920_001	Banana	plastid	60.37	66.37
CDY41630	Canola	cytosol	65.86	66.32
TraesCS5D01G341800.2	Wheat	cytosol	62.77	66.18
VIT_00s0264g00090.t01	Wine grape	cytosol	23.6	65.19
HORVU5Hr1G084740.4	Barley	plastid	53.38	65.17
GSMUA_Achr9P21120_001	Banana	nucleus	18.56	64.29
GSMUA_Achr11P...	Banana	cytosol	60.71	63.7
Zm00001d022594_P002	Maize	cytosol	64.26	63.39
VIT_02s0025g04620.t01	Wine grape	cytosol	51.89	53.29
OQU84227	Sorghum	cytosol	52.0	49.4
Zm00001d015033_P001	Maize	extracellular, plastid, vacuole	51.78	48.55
TraesCS6B01G096200.1	Wheat	cytosol	48.0	48.44
TraesCS6A01G071700.1	Wheat	cytosol, nucleus, plastid	47.88	48.1
VIT_04s0008g05450.t01	Wine grape	cytosol	42.27	47.55
HORVU6Hr1G012780.6	Barley	cytosol, nucleus, plastid	46.85	47.07
VIT_11s0016g05370.t01	Wine grape	cytosol	43.3	46.49
VIT_11s0016g05360.t01	Wine grape	cytosol	42.96	45.84
VIT_09s0002g06760.t01	Wine grape	cytosol	42.61	45.81
VIT_15s0048g01160.t01	Wine grape	cytosol	52.0	41.77
VIT_09s0002g02390.t01	Wine grape	cytosol	35.51	41.22
Os02t0120200-01	Rice	extracellular	22.91	21.98
VIT_05s0077g01830.t01	Wine grape	cytosol	23.25	18.26

Protein Annotations

KEGG:00564+3.1.4.4	KEGG:00565+3.1.4.4	EntrezGene:100252422	wikigene:100252422	Gene3D:3.30.870.10	MapMan:5.7.2.4.3
InterPro:C2_dom	ProteinID:CCB49222	ProteinID:CCB49222.1	UniProt:F6HAH8	EMBL:FN595505	GO:GO:0003674
GO:GO:0003824	GO:GO:0004630	GO:GO:0005488	GO:GO:0005509	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005773	GO:GO:0005886	GO:GO:0006629	GO:GO:0006950
GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0008219	GO:GO:0009056
GO:GO:0009409	GO:GO:0009506	GO:GO:0009628	GO:GO:0009719	GO:GO:0009789	GO:GO:0009987
GO:GO:0012501	GO:GO:0016020	GO:GO:0016042	GO:GO:0016787	GO:GO:0046470	GO:GO:0046473
GO:GO:0070290	GO:GO:0090333	InterPro:IPR000008	InterPro:IPR001736	EntrezGene:LOC100252422	wikigene:LOC100252422
PFAM:PF00168	PFAM:PF00614	PFAM:PF12357	PFAM:PF13091	PIRSF:PIRSF036470	InterPro:PLD-like_dom
InterPro:PLipase_D/transphosphatidylase	InterPro:PLipase_D_C	InterPro:PLipase_D_fam	InterPro:PLipase_D_pln	PFscan:PS50004	PFscan:PS50035
PANTHER:PTHR18896	PANTHER:PTHR18896:SF86	SMART:SM00155	SMART:SM00239	SUPFAM:SSF49562	SUPFAM:SSF56024
UniParc:UPI0002107EEF	ArrayExpress:VIT_00s0264g00100	EnsemblPlantsGene:VIT_00s0264g00100	EnsemblPlants:VIT_00s0264g00100.t01	RefSeq:XP_002270350	RefSeq:XP_002270350.2
RefSeq:XP_019073812.1	:	:	:	:	:

Description

Phospholipase D [Source:UniProtKB/TrEMBL;Acc:F6HAH8]

Coordinates

chrUn:+:19042139..19061250

Molecular Weight (calculated)

99156.0 Da

IEP (calculated)

6.858

GRAVY (calculated)

-0.450

Length

873 amino acids

Sequence
(BLAST)

001: MADTASQRVI YLHGDLDLKI LKARDLPNMD LVTEHVRRCF TLCDACKTPS AGKDVSTPDT DDRPARHKPG DKRLDHHRKI ITSDPYVTVC VPQATVARTR
101: VISNTQNPYW NENFYISLAH PVANLEFQVK DNDLFGAEVI GVARIPAERI ATGEHISGWF PVIGANGKQP KPTTALQIEI KFTPFEQNPF YRTGIAGDPE
201: HLGVRHTYFP LRKGGLATLY QDAHVPEGLL PDIEVDGGQV YRHETCWEDI CHAIVEAHHM VYIVGWSIYH KVKLIREPTR PLPRGGDLTL GDLLKYKSEE
301: GVRVLMLVWD DRTSHDKFFI NTKGVMETHD EETRKFFKHS SVICVLSPRY ASSKLSFIKQ QVVGTIFTHH QKCVLVDSQA HGNNRKITAF LGGIDLCDGR
401: YDTPEHRLFK DLDTVFNEDF HNPTFPAGSK APRQPWHDLH CKIEGPAAYD VLINFEQRWK KATKWTEFGL HLKKISHWHD DALIKIDRIS WILSPPSGSD
501: GDDVTSVPKD DPSLWVTKED DPENWHVQVF RSIDSGSLKG FPKTVDTAEN QQNLICAKNL VIDKSIQTAY IQAIRSAQHF IYIENQYFLG SSYAWPSYKD
601: AGADNLIPME LALKIASKIR AKERFAVYIV IPMWPEGDPK SNTVQEILFW QAQTMQMMYE VIAKELKSMQ LEDSHPLDYL NFYCLGNREG VTKEMSEKAS
701: PTPANADAVL ASAKFRRFMI YVHAKGMIVD DEYLIMGSAN INQRSMAGTK DTEIAMGAYQ RHHTWAEKKK HPHGQVYGYR MSLWAEHLGM VNKLFKEPEN
801: LECVRTVNEM AEENWKRFTA EEFTPLQGHL LKYPMQVDAD GKVSSKPGHE NFPDVGGYAL GCHSTTLPDS LTT

Best Arabidopsis Sequence Match ( AT4G35790.2 )
(BLAST)

001: MAEKVSEDVM LLHGDLDLKI VKARRLPNMD MFSEHLRRLF TACNACARPT DTDDVDPRDK GEFGDKNIRS HRKVITSDPY VTVVVPQATL ARTRVLKNSQ
101: EPLWDEKFNI SIAHPFAYLE FQVKDDDVFG AQIIGTAKIP VRDIASGERI SGWFPVLGAS GKPPKAETAI FIDMKFTPFD QIHSYRCGIA GDPERRGVRR
201: TYFPVRKGSQ VRLYQDAHVM DGTLPAIGLD NGKVYEHGKC WEDICYAISE AHHMIYIVGW SIFHKIKLVR ETKVPRDKDM TLGELLKYKS QEGVRVLLLV
301: WDDKTSHDKF GIKTPGVMGT HDEETRKFFK HSSVICVLSP RYASSKLGLF KQQVVGTLFT HHQKCVLVDT QAVGNNRKVT AFIGGLDLCD GRYDTPEHRI
401: LHDLDTVFKD DFHNPTFPAG TKAPRQPWHD LHCRIDGPAA YDVLINFEQR WRKATRWKEF SLRLKGKTHW QDDALIRIGR ISWILSPVFK FLKDGTSIIP
501: EDDPCVWVSK EDDPENWHVQ IFRSIDSGSV KGFPKYEDEA EAQHLECAKR LVVDKSIQTA YIQTIRSAQH FIYIENQYFL GSSYAWPSYR DAGADNLIPM
601: ELALKIVSKI RAKERFAVYV VIPLWPEGDP KSGPVQEILY WQSQTMQMMY DVIAKELKAV QSDAHPLDYL NFYCLGKREQ LPDDMPATNG SVVSDSYNFQ
701: RFMIYVHAKG MIVDDEYVLM GSANINQRSM AGTKDTEIAM GAYQPNHTWA HKGRHPRGQV YGYRMSLWAE HLGKTGDEFV EPSDLECLKK VNTISEENWK
801: RFIDPKFSEL QGHLIKYPLQ VDVDGKVSPL PDYETFPDVG GKIIGAHSMA LPDTLTT

Arabidopsis Description

PLDDELTAPhospholipase D delta [Source:UniProtKB/Swiss-Prot;Acc:Q9C5Y0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.