CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
plastid 1
plasma membrane 1
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plasma membrane, plastid
BaCelLo:	nucleus
iPSORT:	plastid
MultiLoc:	plasma membrane
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d015033_P001	Maize	extracellular, plastid, vacuole	87.92	86.79
TraesCS6A01G071700.1	Wheat	cytosol, nucleus, plastid	62.02	65.59
TraesCS6B01G096200.1	Wheat	cytosol	61.59	65.43
HORVU6Hr1G012780.6	Barley	cytosol, nucleus, plastid	61.37	64.9
PGSC0003DMT400009253	Potato	cytosol	15.78	55.56
PGSC0003DMT400025590	Potato	cytosol	48.64	55.12
KXG36094	Sorghum	cytosol	51.25	54.83
Solyc04g082000.2.1	Tomato	cytosol	50.05	54.83
KRH60977	Soybean	cytosol	50.49	54.78
KRH51648	Soybean	cytosol	49.51	53.72
Bra034939.1-P	Field mustard	cytosol	48.31	53.3
GSMUA_Achr11P...	Banana	cytosol	48.1	53.12
Solyc02g061850.2.1	Tomato	cytosol	48.86	52.82
VIT_18s0001g00770.t01	Wine grape	nucleus	50.16	52.69
Solyc02g083340.2.1	Tomato	nucleus	49.4	52.42
AT4G35790.1	Thale cress	cytosol	49.51	52.42
VIT_00s0264g00100.t01	Wine grape	cytosol	49.4	52.0
KRH76589	Soybean	extracellular	48.86	51.97
KRH28860	Soybean	mitochondrion	48.53	51.5
CDX72557	Canola	cytosol	48.42	51.45
EER98315	Sorghum	cytosol	46.79	51.25
CDY67335	Canola	cytosol	48.2	51.15
Bra010512.1-P	Field mustard	cytosol	44.72	50.93
Bra017730.1-P	Field mustard	cytosol	46.46	50.89
CDY35793	Canola	cytosol	47.77	50.75
CDY47037	Canola	cytosol	48.86	50.73
CDY41630	Canola	cytosol	47.66	50.52
PGSC0003DMT400009250	Potato	cytosol	30.36	50.45
CDX80734	Canola	cytosol	6.64	50.41
KRH37270	Soybean	cytosol	13.93	48.67
KXG40331	Sorghum	cytosol	43.63	48.55
EES17463	Sorghum	cytosol	39.39	44.53
KXG31749	Sorghum	cytosol	39.28	44.46
OQU77524	Sorghum	plastid	39.39	44.09
EER88618	Sorghum	cytosol	38.41	43.26
KXG39222	Sorghum	cytosol, peroxisome, vacuole	38.85	42.25
EER98913	Sorghum	cytosol	37.43	41.6
EES10287	Sorghum	cytosol	36.23	39.74
EER92041	Sorghum	cytosol, nucleus, peroxisome	43.53	37.99
Os02t0120200-01	Rice	extracellular	36.23	36.59
CDY42882	Canola	nucleus	11.75	33.54
OQU77834	Sorghum	endoplasmic reticulum, golgi	16.87	22.5
KXG32384	Sorghum	cytosol, nucleus, peroxisome	21.33	17.48
OQU77836	Sorghum	cytosol	5.66	10.86

Protein Annotations

KEGG:00564+3.1.4.4	KEGG:00565+3.1.4.4	Gene3D:3.30.870.10	MapMan:50.3.1	UniProt:A0A1Z5RKN2	InterPro:C2_dom
ncoils:Coil	GO:GO:0003674	GO:GO:0003824	GO:GO:0004630	GO:GO:0005488	GO:GO:0005509
GO:GO:0005575	GO:GO:0006629	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987
GO:GO:0016020	GO:GO:0016042	GO:GO:0016787	GO:GO:0046470	GO:GO:0070290	InterPro:IPR000008
InterPro:IPR001736	EnsemblPlants:OQU84227	ProteinID:OQU84227	ProteinID:OQU84227.1	PFAM:PF00168	PFAM:PF00614
PFAM:PF12357	PIRSF:PIRSF036470	InterPro:PLipase_D/transphosphatidylase	InterPro:PLipase_D_C	InterPro:PLipase_D_fam	InterPro:PLipase_D_pln
PFscan:PS50004	PFscan:PS50035	PANTHER:PTHR18896	PANTHER:PTHR18896:SF70	SMART:SM00155	SMART:SM00239
EnsemblPlantsGene:SORBI_3004G016900	SUPFAM:SSF49562	SUPFAM:SSF56024	UniParc:UPI000B4250F6	SEG:seg	:

Description

hypothetical protein

Coordinates

chr4:-:1337266..1341010

Molecular Weight (calculated)

101772.0 Da

IEP (calculated)

8.170

GRAVY (calculated)

-0.463

Length

919 amino acids

Sequence
(BLAST)

001: MSYGSSGSPA WLWLHGDLNL TIHEARGLPN MDLLSTILRR LCLCPPLVGM TTPSTRPRSL PDDDDDRAHH RAHPHNHHLR GRLHRRRHEP QPHGHLLLPT
101: SDPYAAVVVA GPHETTVART FVYRNSEAPK WEASFLLPLA HAATGLEFHV KDADPFGSDL IGVASLPAAA VLAAADAPIV SKWLDLNRPD GRRGPPKPGG
201: GSAIRISATF VPAAAAASRQ RSGGVPAYFP LRRGCDVRLY QDAHVAPGEV DGVGPRFRPG RCWEDLCMAV LCAQRLVYVA GWSVHTRVQL LREAMSPEMA
301: AKAAELEELG GEPVENMSLG ELLKYKSQEG VRVLLLVWDD RTSHDNFFVK TGGVMQTRDE ETKKFFKHSS VICVLSPRYP SSKLGLVKQK VVGTLYTHHQ
401: KCVLVDTPAS ESTRRITAFL GGLDLCGGRY DTPSHRLFRD LNTVFHGDVY NPLFGGDLKG PRQPWHDLHC RLDGPAAYDV LKNFEQRWRK ATKLREMFGG
501: KAAHRKDDAL LKLERIPWIL SPSKRRSAGG DAAADDDNDD EERDQPALHV VPDGDPERWH AQVFRSVDAG SVKRFPRPWE RAEMSRRHLV GDKNLAVEQS
601: IHAAYVAAIR SAERFVYVEN QYFIGGSYAW PSYRNSGACN LVPMEIALKV ASKIRAGEPF AAYVVMPMWP EGNPSSGPAQ EILFWQNQTM EMMYRVVAAA
701: AMEEGKSGHP TDYLNFYCLG NREPAAEDAG GGDRDKWADP PDDGTSSAAP AARARRHRRF MVYVHSKGMI VDDEYVIIGS ANINQRSLAG SRDTEIAVGA
801: YQPDHTGADG DAPRGKVHAY RMSLWEEHLG KEAVRRAEVQ RPESPGCVKL VNGIARRNWR RYAADHDDGK GPLQGHLMRY PVHVQADGRV VPLPGQEMFP
901: DVGGRVVGAP NNLPDYLTM

Best Arabidopsis Sequence Match ( AT4G35790.2 )
(BLAST)

001: MAEKVSEDVM LLHGDLDLKI VKARRLPNMD MFSEHLRRLF TACNACARPT DTDDVDPRDK GEFGDKNIRS HRKVITSDPY VTVVVPQATL ARTRVLKNSQ
101: EPLWDEKFNI SIAHPFAYLE FQVKDDDVFG AQIIGTAKIP VRDIASGERI SGWFPVLGAS GKPPKAETAI FIDMKFTPFD QIHSYRCGIA GDPERRGVRR
201: TYFPVRKGSQ VRLYQDAHVM DGTLPAIGLD NGKVYEHGKC WEDICYAISE AHHMIYIVGW SIFHKIKLVR ETKVPRDKDM TLGELLKYKS QEGVRVLLLV
301: WDDKTSHDKF GIKTPGVMGT HDEETRKFFK HSSVICVLSP RYASSKLGLF KQQVVGTLFT HHQKCVLVDT QAVGNNRKVT AFIGGLDLCD GRYDTPEHRI
401: LHDLDTVFKD DFHNPTFPAG TKAPRQPWHD LHCRIDGPAA YDVLINFEQR WRKATRWKEF SLRLKGKTHW QDDALIRIGR ISWILSPVFK FLKDGTSIIP
501: EDDPCVWVSK EDDPENWHVQ IFRSIDSGSV KGFPKYEDEA EAQHLECAKR LVVDKSIQTA YIQTIRSAQH FIYIENQYFL GSSYAWPSYR DAGADNLIPM
601: ELALKIVSKI RAKERFAVYV VIPLWPEGDP KSGPVQEILY WQSQTMQMMY DVIAKELKAV QSDAHPLDYL NFYCLGKREQ LPDDMPATNG SVVSDSYNFQ
701: RFMIYVHAKG MIVDDEYVLM GSANINQRSM AGTKDTEIAM GAYQPNHTWA HKGRHPRGQV YGYRMSLWAE HLGKTGDEFV EPSDLECLKK VNTISEENWK
801: RFIDPKFSEL QGHLIKYPLQ VDVDGKVSPL PDYETFPDVG GKIIGAHSMA LPDTLTT

Arabidopsis Description

PLDDELTAPhospholipase D delta [Source:UniProtKB/Swiss-Prot;Acc:Q9C5Y0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.