CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
extracellular 1
plastid 1
cytosol 3
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr10P...	Banana	cytosol, nucleus, peroxisome	14.44	69.94
EER88618	Sorghum	cytosol	62.89	64.58
KXG31749	Sorghum	cytosol	60.26	62.19
EES17463	Sorghum	cytosol	60.26	62.12
OQU77524	Sorghum	plastid	58.0	59.2
GSMUA_Achr10P...	Banana	cytosol	21.24	58.36
TraesCS7D01G531200.1	Wheat	cytosol	54.42	55.34
TraesCS7D01G531300.1	Wheat	cytosol	54.06	54.98
TraesCS7B01G468300.1	Wheat	cytosol	53.94	54.85
TraesCS7B01G468200.1	Wheat	cytosol	54.06	54.84
TraesCS1D01G035800.2	Wheat	cytosol	53.7	54.41
TraesCS1B01G050400.1	Wheat	cytosol	53.7	54.35
TraesCS7A01G545000.1	Wheat	cytosol	53.22	54.0
TraesCS7A01G544900.1	Wheat	cytosol	49.76	53.88
KXG39222	Sorghum	cytosol, peroxisome, vacuole	53.94	53.49
EER98913	Sorghum	cytosol	46.06	46.67
KXG40331	Sorghum	cytosol	42.72	43.34
EER98315	Sorghum	cytosol	41.53	41.48
KXG36094	Sorghum	cytosol	40.69	39.7
OQU84227	Sorghum	cytosol	39.74	36.23
GSMUA_Achr6P35870_001	Banana	plasma membrane	40.45	35.65
EER92041	Sorghum	cytosol, nucleus, peroxisome	42.36	33.71
OQU77834	Sorghum	endoplasmic reticulum, golgi	17.42	21.19
KXG32384	Sorghum	cytosol, nucleus, peroxisome	23.39	17.48
OQU77836	Sorghum	cytosol	7.28	12.73

Protein Annotations

KEGG:00564+3.1.4.4	KEGG:00565+3.1.4.4	Gene3D:2.60.40.150	Gene3D:3.30.870.10	MapMan:5.7.2.4.1	EntrezGene:8076336
InterPro:C2_dom	InterPro:C2_domain_sf	UniProt:C5Y8F2	EnsemblPlants:EES10287	ProteinID:EES10287	ProteinID:EES10287.1
GO:GO:0003674	GO:GO:0003824	GO:GO:0004630	GO:GO:0005488	GO:GO:0005509	GO:GO:0005575
GO:GO:0006629	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0016020
GO:GO:0016042	GO:GO:0016787	GO:GO:0046470	GO:GO:0070290	InterPro:IPR000008	InterPro:IPR001736
InterPro:IPR035892	PFAM:PF00168	PFAM:PF00614	PFAM:PF12357	PIRSF:PIRSF036470	InterPro:PLipase_D/transphosphatidylase
InterPro:PLipase_D_C	InterPro:PLipase_D_fam	InterPro:PLipase_D_pln	PFscan:PS50035	PANTHER:PTHR18896	PANTHER:PTHR18896:SF59
MetaCyc:PWY-3561	MetaCyc:PWY-7039	SMART:SM00155	SMART:SM00239	EnsemblPlantsGene:SORBI_3005G222500	SUPFAM:SSF49562
SUPFAM:SSF56024	unigene:Sbi.4376	UniParc:UPI0001A86A6C	RefSeq:XP_002451299.1	:	:

Description

hypothetical protein

Coordinates

chr5:-:70914593..70918185

Molecular Weight (calculated)

93891.2 Da

IEP (calculated)

6.667

GRAVY (calculated)

-0.424

Length

838 amino acids

Sequence
(BLAST)

001: MAAMPLLHGT LDATIFEAKF NNSNQVTKFL QGLIPQMEGR PTTGLPVQMY ATIDLNNARV GRTRIDDSNP DNPRWNESFH IYCAHYTTHV VFSIKLRLPI
101: DAVLVGRAYL PVQDLLSPTP NDQEDNIVDR WLDILDDEKK PLPHGPKIHV RARFTDVAGD PSFGSGIDGK KYAGVPRTFF KQRQGCRVTL YQDAHVLDTF
201: RPDIKLAGGA ASYEPRRCWE DVYDAIDGAR HFVYVTGWSV YAETTLVRDG NRKHPGGGTT VGELLKRKAK EGVRVLMLVW DDPTSLLNIG ILPSQLGTND
301: ANTFSYFRGS GVHCVPCPRN LDDSEYPVQF RKTVALSHHQ KTVIVDADEG SGGLRRVVSF VGGIDLTNGR YDTQSHSLFS TLNTAHSNDF YQNNIAGASI
401: DNGGPREPWH DIHCKIEGPA AWDVLHNFEQ RWRKQGGKDD ILHNVLWPWK NKGDLLVDLK GMENVIAPQS AAAVAGGDPE AWNVQVFRSI DGSACSGFPK
501: TPQEAAQSGL ISGKNHVIDR SIQDAYIHAI RRAKRFIYIE NQYFLGSSFG WKPDGIKPED IGALQLVPRE LSLKIVSKIE AGEPFVVYIV VPMWPEGVPT
601: AWNIQAMLSW QSRTMEMMYT DVSRALKAKN IDANPKDYLS FFCLGNREVK VPDEYEPKRH PTPGTDYDRA QKARRSMIYV HSKLMIVDDE YIIIGSANIN
701: QRSMDGARDS EIAMGAYQPS HLNTNGDVAR GQVHGLRMSL WYEHLGELQE DFKDPGSLKC VRKVNKRAEE FWKMYTSDNL EDNLHGHLLS YPIDVTSEGT
801: VTEREGVKFF PDTEAPVLGT VPLRVQLGSA FTDYVFTT

Best Arabidopsis Sequence Match ( AT1G52570.1 )
(BLAST)

001: MEECLLHGRL HATIYEVDHL HAEGGRSGFL GSILANVEET IGVGKGETQL YATIDLEKAR VGRTRKITKE PKNPKWFESF HIYCGHMAKH VIFTVKDANP
101: IGATLIGRGY IPVEDILHGE EVDRWVDILD NEKNPIAGGS KIHVKLQYFG VEKDKNWNRG IKSAKFPGVP YTFFSQRRGC KVSLYQDAHI PGNFVPKIPL
201: AGGKNYEPHR CWEDIFDAIT NAKHLIYITG WSVYTEISLV RDSRRPKQGG DVTVGELLKK KASEGVKVIL LVWDDRTSVD LLKKDGLMAT HDEETENFFR
301: GTDVNCILCP RNPDDGGSIV QNLQISTMFT HHQKIVVVDS EMPSGGSRSR RIVSFVGGLD LCDGRYDTPF HSLFRTLDTA HHDDFHQPNF TGAAITKGGP
401: REPWHDIHCR LEGPIAWDVL YNFEQRWSRQ GGKDILVKMR ELGDIIIPPS PVLFSEDHDV WNVQLFRSID GGAAAGFPDS PEAAAEAGLV SGKDNIIDRS
501: IQDAYIHAIR RAKDFIYIEN QYFLGSSFAW SADGIKPEEI NALHLIPKEL SLKIVSKIKA GEKFKVYVVV PMWPEGIPES GSVQAILDWQ KRTMEMMYKD
601: VIKALRENGL EGEDPRDYLT FFCLGNREVK KDGEYEPSEK PEPDTDYIRA QEARRFMIYV HTKMMIVDDE YIIIGSANIN QRSMDGARDS EIAMGGYQPY
701: HLSTRQPARG QIHGFRMSLW YEHLGMLDET FLDPSSQECI QKVNRVADKY WDLYSSESLE HDLPGHLLRY PIGIASEGNI TELPGCEFFP DTKARILGVK
801: SDYMPPILTT

Arabidopsis Description

PLDALPHA2Phospholipase D alpha 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SSQ9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.