Factsheet for GSMUA_Achr10P26970_001

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, nucleus, cytosol

Predictor Summary:

nucleus 2
extracellular 1
peroxisome 1
endoplasmic reticulum 1
vacuole 1
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr9P21120_001	Banana	nucleus	52.6	36.11
GSMUA_Achr7P10170_001	Banana	cytosol	91.91	29.44
GSMUA_Achr10P...	Banana	cytosol, nucleus, peroxisome	58.38	25.31
GSMUA_Achr1P14590_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	78.61	24.37
GSMUA_Achr10P...	Banana	cytosol, plastid	61.85	23.41
Zm00001d046508_P001	Maize	cytosol, mitochondrion, plasma membrane	75.14	15.93
TraesCS4B01G377600.1	Wheat	cytosol	74.57	15.71
EER88618	Sorghum	cytosol	73.99	15.69
Os06t0604400-01	Rice	plasma membrane	73.99	15.67
HORVU7Hr1G089960.3	Barley	cytosol	73.99	15.61
TraesCS7D01G372800.1	Wheat	cytosol	73.99	15.61
TraesCS7A01G376500.3	Wheat	cytosol	73.99	15.61
TraesCSU01G145400.1	Wheat	cytosol	73.41	15.47
TraesCS7B01G277900.1	Wheat	plastid	73.99	15.04
Os06t0604200-02	Rice	cytosol, plasma membrane	69.94	14.54
GSMUA_Achr6P35870_001	Banana	plasma membrane	79.77	14.51
Os06t0604300-01	Rice	plasma membrane	70.52	14.49
EES10287	Sorghum	cytosol	69.94	14.44
TraesCS7A01G544900.1	Wheat	cytosol	63.01	14.08
TraesCS7D01G531200.1	Wheat	cytosol	65.9	13.84
TraesCS1D01G035800.2	Wheat	cytosol	65.9	13.78
TraesCS7D01G531300.1	Wheat	cytosol	65.32	13.71
TraesCS7B01G468300.1	Wheat	cytosol	65.32	13.71
TraesCS7B01G468200.1	Wheat	cytosol	65.32	13.68
TraesCS1B01G050400.1	Wheat	cytosol	64.16	13.41
TraesCS7A01G545000.1	Wheat	cytosol	63.58	13.32
GSMUA_Achr1P07360_001	Banana	cytosol	53.76	12.7
GSMUA_Achr2P00290_001	Banana	endoplasmic reticulum	27.17	12.57
GSMUA_Achr8P12030_001	Banana	plastid	53.76	11.57
GSMUA_Achr7P23470_001	Banana	cytosol	52.02	11.44
GSMUA_Achr1P14920_001	Banana	plastid	50.29	10.96
GSMUA_Achr11P...	Banana	cytosol	50.87	10.58
GSMUA_AchrUn_...	Banana	cytosol	51.45	10.37
GSMUA_Achr4P24890_001	Banana	cytosol, plastid	50.29	9.83
GSMUA_Achr11P...	Banana	mitochondrion	9.25	9.09
GSMUA_Achr5P20150_001	Banana	cytosol	51.45	8.93
HORVU0Hr1G009480.5	Barley	extracellular, peroxisome	23.12	6.12
GSMUA_Achr9P16530_001	Banana	cytosol, nucleus, peroxisome	29.48	4.82
GSMUA_Achr10P...	Banana	cytosol	1.73	0.98
GSMUA_Achr9P21110_001	Banana	mitochondrion	1.16	0.32
GSMUA_Achr2P00270_001	Banana	cytosol, nucleus, peroxisome	0.58	0.12
GSMUA_Achr11P...	Banana	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:GSMUA_Achr10P26970_001	EnsemblPlants:GSMUA_Achr10T26970_001	EnsemblPlantsGene:GSMUA_Achr10G26970_001	Gene3D:3.30.870.10	GO:GO:0003674	GO:GO:0003824
InterPro:IPR001736	InterPro:PLipase_D/transphosphatidylase	InterPro:PLipase_D_fam	KEGG:00564+3.1.4.4	KEGG:00565+3.1.4.4	PANTHER:PTHR18896
PANTHER:PTHR18896:SF85	PFAM:PF00614	PFscan:PS50035	SMART:SM00155	SUPFAM:SSF56024	UniParc:UPI000294D162
UniProt:M0RLS1	MapMan:50.3.1	:	:	:	:

Description

Phospholipase D alpha 1 [Source:GMGC_GENE;Acc:GSMUA_Achr10G26970_001]

Coordinates

chr10:-:30271920..30273953

Molecular Weight (calculated)

19914.8 Da

IEP (calculated)

5.037

GRAVY (calculated)

-0.424

Length

173 amino acids

Sequence
(BLAST)

001: MEMMYTDIVQ ALQAKGIEAN PKDYLTFFCL GNREVKKSGE YEPLEHPQPD TDYSRAQEAR RFMIYVHTKM MIVDDEYIII GSANINQRSM DGSRDSEIAM
101: GAYQPYHLST REPARGQIHG FRLALWYEHL GMLDDVFLHP ESLQCLPGME FFPDTRARVL GAKSDYLPPI LTT

Best Arabidopsis Sequence Match ( AT1G52570.1 )
(BLAST)

001: MEECLLHGRL HATIYEVDHL HAEGGRSGFL GSILANVEET IGVGKGETQL YATIDLEKAR VGRTRKITKE PKNPKWFESF HIYCGHMAKH VIFTVKDANP
101: IGATLIGRGY IPVEDILHGE EVDRWVDILD NEKNPIAGGS KIHVKLQYFG VEKDKNWNRG IKSAKFPGVP YTFFSQRRGC KVSLYQDAHI PGNFVPKIPL
201: AGGKNYEPHR CWEDIFDAIT NAKHLIYITG WSVYTEISLV RDSRRPKQGG DVTVGELLKK KASEGVKVIL LVWDDRTSVD LLKKDGLMAT HDEETENFFR
301: GTDVNCILCP RNPDDGGSIV QNLQISTMFT HHQKIVVVDS EMPSGGSRSR RIVSFVGGLD LCDGRYDTPF HSLFRTLDTA HHDDFHQPNF TGAAITKGGP
401: REPWHDIHCR LEGPIAWDVL YNFEQRWSRQ GGKDILVKMR ELGDIIIPPS PVLFSEDHDV WNVQLFRSID GGAAAGFPDS PEAAAEAGLV SGKDNIIDRS
501: IQDAYIHAIR RAKDFIYIEN QYFLGSSFAW SADGIKPEEI NALHLIPKEL SLKIVSKIKA GEKFKVYVVV PMWPEGIPES GSVQAILDWQ KRTMEMMYKD
601: VIKALRENGL EGEDPRDYLT FFCLGNREVK KDGEYEPSEK PEPDTDYIRA QEARRFMIYV HTKMMIVDDE YIIIGSANIN QRSMDGARDS EIAMGGYQPY
701: HLSTRQPARG QIHGFRMSLW YEHLGMLDET FLDPSSQECI QKVNRVADKY WDLYSSESLE HDLPGHLLRY PIGIASEGNI TELPGCEFFP DTKARILGVK
801: SDYMPPILTT

Arabidopsis Description

PLDALPHA2Phospholipase D alpha 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SSQ9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.